SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41141_c2_seq3
Scaffold_idBomo_Scaf026
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoMG25814_5prime_partial:A_BomoMG_comp41141_c2_seq3
Sequence
(Nucleotide)
AACAATCATACTTATCATACAAAAAATGGAGAACGTTTTAGCGCGTCGGCGTCAGTCCAT
AATGCGCAAGCGCAGTGGCGGCTTGCGATGGCGGCGCGGTCGCGGACCAATCACGGCCGG
TTGAGGCGCGTTCCGAGGAACGCGCTGATGGGAATTAAGAGTGCGTTCGGAAATGTCCCG
TCGCGTTATAGGCTCCCCCTCCAAGTTGGTAGCACGTCCCGGGTCCAACTTGGTATCTGA
CGGTTTAATACGCGGCCTACCCCTACCTTTCTTTGGAACAATGGGTGTGGTATCAGACGT
TTGAGTAAAGGGGGTCAGGTCCGAACTGTGGTATTTTCCTATGACAGTGTCGTCGTCAGT
CAAATTAGCGAGTATAAAGGTAGTGGGAGTTATAACACGTTTAACGCGATATGGGCCATC
TCGTTTTGGCATGAATTTGCTGGTAGTTCCTTTCGAGGCATTGCTCAGTGCGTGGGTTTT
GACCAAGACCAAATCATTTTCTTTATAAGGAGGCATAGGACGGCGTGCAGTATCACCTAT
CTCCTTACGCTGATCTTGCTTCTTCTCAACACGATCACGAATATCCTGTAGGGTACGTAT
GAAGGAGCGCAAATATGGAGTGGCCGAAGGAACAAAGTTCTCTTTATCTAAGATTGCACG
TAAATCATGGTGCATCTCATAAGGTGTGCGAAGCTCGCGTGCGAACGTTAAAAAGGCTGG
AGTCTTCCCAGTGGTGGAACAGACGGCGCTGTTCATAGCGAACCGAACATGGGCAAGATA
TTTAGGCCAGTTCCGGTGCTCGGTTTTTACTAATAAAGACAGTTGTACTTTGAGATCCCG
ATTCTTGCGTTCGACGGGATTAGCCTCAGGGTGGTAAACTGGGATGAGCTCTTGTTTAAT
ACCTAAAATAAACATTGAAAGTTGCATCACTGAGGATATGAATTGAGTCCCGTTATCGGA
CACAACTCGACGTGGCAATCCATATCTGAGGAAGTATTCCTCTATAAGAAGCTTGGCGCA
ATTTTCTGCTGTGGCCTCCACAAGCGAGAACAGCTCCACCCACCTGGTAGCTACGTCTTC
AACAATAAGGACCCAACGTTGTCCTTGATCTCCTTCAGGCAGGGGACCGAAAAGATCCAC
CGCCAGGACTTCAGATCTTTGTTGGAGGACGGGTGTCTGGAGGAGACCAGCTGGTTTCTG
GTTTGCGGCTTTATACCTGAGACAGTCCACACAGTTCTTTAGGTACTCTGTGACGTAACG
ACGCATTCCGGGAAAAAAGAAGTGTTCACGGATGCGTTGTAGAGTCCGCTCAATACCCTG
GTGGCCAGCAGTTGGCGAATCGTGAAACGACTTTAAAATTTCTTCCCTTTTTGAAATTGG
CACTACCATCTGCGCTTCTTCAGAGTCGTTATCTGGATCATAACGGTATAGCACGCCCTG
CTGCAGTACATATCCACGTTCCAGCCACCGAGTAGAGGTAAGTTCGTCTACGCTTTCTAG
GTCTTGTATAATTTTAGCCACTTCTGGATCTTCAAGCTGCTCGGCTCGTAGCTGGCTCGG
CAGTGCTTGAGGTAAGTCGACGGTCACGGAGCACACTTCGCAATCGTTGGTACCGTCACA
GGTAGGTCGACTCAAAGTATCAGCCAAGGTATTAACTTTACCTGGAGAGTATTCTATCTT
GAGATCAAACGCCTGGAGTTTTAGCGCCCATCGGATGAGACGACCACTTGGGGACTTGAG
TGTAAGCAACCACTTAAGGGGCTGGTGGTCACTTTTGACTATGCATAGATGGCCATCAAT
GTATCCCCTGAACTTTTCCACTGCCCAGACGACTGCGAGCGCTTCCCGCTCGGTGGTAGA
GTAATTCCTCTCGGCTGACGTCAGAAGTCTGCTGGCGTATTCGATTGGTTTTTCATTGTT
ATTGTTACCTTGTAACAGTGCAGCCCCTATAGCATAATTGCTGGCGTCTGTGCGCAGCAA
GAAGGGCTGAGTGTAGTCGGCCTGTATCAAAATAGGAGCGCTAGTAAGCTTACTCTTTAG
CAGGTCGAAGGCGCGTTGTTGTGCTTCACCCCAGGTCCACGCTTCGTTTTTGCGGGTAAG
TTTCGTCAGAGGTTCAGCAATACGCGAGAAGTCAGGAATGAATTTCCTAAACCAGGAACA
GGTCTGTAAAAATGATTTCAAATGTTTGAGATTGTGCGGTTCCTTCATTTTCAGGACGGC
GTCGACTTTGGTGCTATCCGGCTTGATTCCTTTGGGTGTGATCACATGGCCTAAGTATGT
TACCTCTTGGCGAGCAAAGTGACATTTGGCGCGGTTCGCGTGGAGTCCAAAGTGACGCAG
TCTGTCAAACACCTTGTCGAGGTCCTGAAGGTGGTCCTGAAAGCTTCCCTGTGTAATCAA
TAAGAGGTCGTCCAAATAAGCCAGCAGAATGATGTCCTGCAGCGACGAGCTTGAGCGGAA
ACGATCGATGAGTCGCTGGAAGGTAGACGGTGCGTTCTTTAAGCCGAACGGCATGCGCTT
GAACCTATACGTACCAAAAGGACTTATAAAAGCGGTTTTGTCTCTGTCTTTTTCAGCTAC
ATTGACCTGCCAATATCCGGCGCGCAGGTCAATGGTGGACATGTGACAGTCCCGTCTGGT
CATCTGCAATAAATCATCGATTAAGGGAATTGGATAACTGTCGGTCTTAGTAATCGCATT
AAGACGACGGTAGTCGACGCAAAATCTGAAAGATCCGTCCTTCTTCGGGACAAGAAGAGC
AGGCGCAGACCACGCAGACTCACACTCTTCGATCACGTCGTCAGCTAACATTTTCTCCAA
CTCTGCCTTCATCACCTCTCTTTTTGCTGGAGTGAGCCTATACGGTGGAACGGCAATAGG
AGCGTTATCGCCGGTGTCGATGTGATGCTCTGCGTACGGAGTCGGCCCTCCCCCTGGTTC
GAACAGGTCTTCGTTCTGTTTCAGAAAGTCGGACAACAGCAGTCTCTCCTTAGGATGCAG
CATAACTCCTTCCTCTTCACGTAGGAAATCTGCAGAGGATACGGACACGCATGGTCTGGA
AAGTTCAAATTCCAATGGGTAAGTCACCTCATCCCCAGAGAAATACCAAATTGAAGCAGC
GAAATCAATCACCATACCCGCTGAGGCAATAAAATCCATACCAAGAATAGTATCATTGGA
TTTGGTCTCTGGAAAAATAATGAACTCCAAACATAGCAATTTATTTTTTATTTTCACATG
CAGGTTAGTAACCAACAACTCACGAATCTGCACGGAGCCATCAGCGAGACGAACGCGTTT
AGTGGTTTCTTGGCAGGGATGATTATGTTTAAGCAACACCTGATATAAGGAAGCACCCGC
AATACACCCTTTAGCACCTGTATCCAATAGTGCGGTACCCCTTACTCCTAGAATTTCCAC
TCCTAGAATCGGTCTCCGTTGTGATTGACAAGTGTCTGGCACTTGTGGATGAGCGTCTAA
ATTAGTTGAGTCAAGAGTCGACAGAAAAATGTTCGAACATGTGGTCGTTCTATTTAAAAA
AAATTGTGACTCGACATTAGAAAATAATTTTTGATTACTATTACAATCGTCCTGCATGGT
CAACCTAGTAGACTTAGTAAGTTTCTTTTTCAAATTATTTATATTTCCGGATTGTCCACG
AAAAACATTCGTCATGGTCACCCTAACATCAGTGTTCAGTTTCCGCGGATGTTCGGAAAA
AATCATAGTCACCCTACTCTTATCATCAGATGTTGAAAATGATTTTGATTTGGTTGTGGT
CAAATTGCACTTACTTATAGAACAATCACCAAGCACGTTAGTGAGCTTAGAAGCCGGAGG
AGGCACATCGTGTGACATGCACTCAAACCTATTGGTATCACGACTAAAATTAAAGACACA
CCCATTATCACAAAGAAAGTATTGATATGGCAAAAATGCAGTAAAATCAATCGGTAAAAA
CTCTATGTGATCAACGTTAGCATAAAATAACTCAGGTAACACAGATGTAAATTGTTTAGG
TAAATACTCTGTGTGATTATTTTTATTATGAAACAATTCAGGTAAAGCAGATTTGAACTG
AGCAGGCAAAAAATTATCAGAGCATTCCCGTGCAATATTATTTACTAATAAAGGTTCCCC
CTCGAGCATGCTATCACTACCCGAGTCCAATTTTGATTCATTAAACCATAAGCTG
(4195 bp)

- SilkBase 1999-2023 -