SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41108_c2_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_MARCH6_[Papilio_machaon]
Ontology
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0046872 F metal ion binding
GO:0070936 P protein K48-linked ubiquitination
Transcript
Level		FPKM:17.50 TPM:13.83
ORF EntryO_BomoMG25183_5prime_partial:A_BomoMG_comp41108_c2_seq1
Sequence
(Nucleotide)
TGGTAACTAAGACCTTTAGGTCAAAGTAACGATTTTCCGGCGACGCGCCGACGACGACCG
TTGGCAGTTAAGGTGACAATAAAATTTTCGTTGTATTAGAATAGTTCAGAAGAGAAGGTT
AGAGAACGAGGTGAAGACGGTAAAATTTATGCTAATAATTAATACAAATTGAATCGTATA
TAGATATTTTTAAAATTGCTTTTCATTATACAGGTCGATGTGGGAACAAATAAAATATCA
GTTCAATTATTTTTTATCTTTTTGTTTCCTTTACTAAAAGCAACCTTTTTATTTATCGTT
CTTAATGGGAAAGGAGGAAAGTACGAGAGAAGTTTCGACTTCAGAATCGTCGAGAAAACG
CCGCTCCTAGACAGAGGCCCTTAGAATGAGATCGATATAAATTTTTAGAGGCACGGAGCG
AACAGGCTTCAGTTTGTCGACGTGACGGCACTGCTGTGCTGCTGCTTCTGTCTCCGGTGA
TCGTAGTTCACGAGCCGCTGACCTACCAGGTACTTGTCGTTCTTTATGTGTTCGTATAGT
TTTCTGAATTGGCGGATCTGGAAGGCCGCTAGCGAGGCGAAGAGCGCGGCGAGGAGCAGC
GCGGGGTAGAGGCGGCGCACGAGCAGGTTGCGCTGGGCGGCCCCTGACACCAGCACGGGC
GCCACGCTGTGCGCCGCCGCGTACGGCACCGCCAGCGCCAGCCCCAGCCACCGCACCAGC
GGGGCACCCACCGACCCCACGATAAACCTTAAATCCATTTCTCTGATGCCGTCCCGGTAC
GCTTTCTCGAGGGCACGGCGCATGCTCCAATCGGGTCCCATCATCGTGAGGGCGCACATT
ATCTTCGTATACAGCACGCCCAGAGCCCAATCTTGCCACACGAATAACACAGGGGACTGC
TCCAAGGGAACGCTCAGTGGTATTACGAGAACCAGTTCGAGCAGCAAGCCGAACATGAGC
GGCACCAGCCCGAGCAGTAGCACGGCGGCGAGCGCGGCGCGGGCGGCCGTGCGGGCCCAC
ACCGCGGCGCG
(1031 bp)

- SilkBase 1999-2023 -