SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41106_c4_seq26
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.34 TPM:0.27
ORF EntryO_BomoMG25114_5prime_partial:A_BomoMG_comp41106_c4_seq26
Sequence
(Nucleotide)
TAGCGGAGAAAACACAGGGCCGAACTCAGAGGTGAGCCGAGTGTCTGTACGAGTGCCGCC
CTTCTGGCCTGAAGAACCGGAGGTGTGGTTTGCGCAAGTCGAAGGCCAATTTGCCCTCGC
TGGCATAAATAGCGACAGCACCATGTACCACACGGTGTCATCACAGCTCAACCAGGAGTA
CGCTAGGGTGATGAAAGACATCCTAACTGCACCACCGCTTATGGATAAATACAAAACGTT
TAAAGAGCAGCTAATCCGTCGGATAACCGTGTCCAGAGAAAAAAAAACGCTACAGTTGCT
GCAACACGAGGAGCTGGGAGATAGAAAGCCGAGCCAATTCCTACAACATCTACAGTACTT
GGCCGGACCGGACATTCCGAGCGACTTTCTACGGACGGTGTGGACCAGTCGGTTACCTGT
AAACATACAGACTGTTGTAGCATCACAACCAAAGCTGGACCTCGAAGGCGCAGCCGAGCT
TGCCGACCGCATCGTGGACATAGTGCAGCCGTCAACACCAGTAATAGCCAGTGCCGGATC
AAGGACTACTTCGACAAGTACCCCCAGTTCTACATTAGAGTTACGCATAGAAGCGCTGTC
GAGGCAAGTAGAAGCACTTGTAAATATACAGAGCCGCCGTGGCAGACAGTATGGAAGACG
CGACACCCGTTCCAGGTCAAACTCGCGCCACATACGCTCCAGGTCCAGAACTCAAACACG
GCAACGACCAAACGACCATCCACACTGCTGGTACCACTTTGAGTTTGGAGATAAGGCAAA
GAAGTGTAGACAGCCGTGCAGCTACGCCTCGGAAAACTCCAAGGGAAACCGCTAGTGGCC
TCAACCGGTTGTCCCGCGCCATCAGGCCGAATCTTCGTCGTAGAGCGAAAAAGTAAGGTG
CAGTACCTGGTCGATACAGGGTCGGACTTATGCGTTTACCCACGTACAGCAATACGAATT
CCTGTACAAGCCAAAACAAAATACGAATTATACGCAGCGAATGGCACGATAATTGCTACT
TACGGGCACGTTAACTTACACTTGGACCTAGGCCTTCGAAGAGACTTCCGATGGCGTTTC
GTGATAGCTGATGTGTCAAAGCCGATTATTGGCGTAGACTTTCTCAGCTTTTACAACCTG
CTCGTCGATTGTAGAAACAAAAGGCTACTCGACGGACTCACATCACTTTTCGTCACAGCA
CCACACCGGGGACGGATCGACGAACTACAATCCGTTCGCACAGTACTGAGCCATGAAGGT
ACGAAATACCACGACCTATTACGCCAGTATCCAGATATTACTCGTCCAGCTGGTAAACAC
GTTGATCCTAAGCATACCACGGTGCATCATATAAGAATAACCCCGGGTCCGCCAGTAACC
AGCCGCCCGCGACGTCTTGACCCAGAGAGACTCCAAATCGCTAAAAAGGAATTCGAAGAA
ATGCTACAGAACGGCACCGCTCGAAGATCCGAAAGTTCGTGGTCCTCTCCTCTTCACCTC
GCACGTAAGAAGGACGACGGCTGGCGACCGTGCGGCGACTACAGGGCACTCAACGCTCGC
ACTATACCAGACAAATACCCTGTTAGAAATATTCAGGACTTCACATACCAGCTGGCAGGT
AAGACGATATTCAGTACTGTGGACTTAATAAAGGCCTATAACCAGATACCAGTTCATCCT
AACGACATCAAGAAGACGGCAATAACAACACCATTCGGCATGTTCGAATTTCCGTTCATG
ACGTTCGGACTTCGGAATGCCGCGCAGACATTCCAACGTTTCATGGATGAGGTACTCAGA
GGCTTAGACTTCGCCTTTGTCTTCTTAGATGACATTTTGGTATATTCGTCATCCGAAGAA
GAGCATCGCCAACATTTAAAAAAACTATTCCAGCGTCTTCAAGAGTACGGTGTTCTAATC
AACATTGCTAAATGCCACTTCGGCAAACCAGAAGTCACATTTTTGGGATTCCACGTATCT
TCTGCCGGAATACGCCCGCTCGAATCGAAGGTGCAAGCCATTTTAGATTTCCCCTTCCCT
GCAACGATTAAAGAGCTTCGACGCTTTTTAGGTATGATCAATTTTTACAGAAAATTTCTA
CCAAAAGCCGCAGAAATTCAGGCACCACTTAACGCGCTGCTATGTGGAGAAAAGTGCAGA
GGGAAACAGCCGATTGAAGCGACCCCAGCGCTACAGCAAGCTTTCGAGAACTGTAAACAT
TGCTTATGTCAATCCGCTCTTTTAGTACACCCGGACGTGAACGCTGAACTAACCATCCAG
ACTGATGCCTCAGATAAGGCTATCGGAGCCGTGCTCCAGCAACGAACGACAAAAGGTTGG
GCACCATTAGCTTTTTTCTCCAGGAAACTAACGTCATCCCAGAAGAGGTACAGTCCGTAC
GACCGAGAACTGCTAGCAGTCTACGAAGCGATACGATACTTCAGATACATGGTAGAGGCA
AGGACATTCGCCGTGCTTACGGACCATAAACCGTTGACTTATGCCTTCACCACACGTCGA
GACAGCTGTTCACCACGACAATACAGGTACTTGGACTACATTTCCCAGTTCTCAACCGAC
ATCCGCTACATTCCCGGCAAAGACAACGTAGTCGCTGACACTCTTTCCCGCATCGAAGAG
GTAGGAGCTGCGACGCTAGAGTACCAGTCCCTCGCCCAAGCTCAGAAAACCGATGCCGAA
CTCAATAACCTCATCCGAGAAGGCTCAAGTCTCACACTCAAAAGTGTTAGAGTACCCGGC
ACAGATGTCGACGTGTACTGCGACATGTCAACATCAGTTCCACGACCATACATCACTGAG
CAATTCCGAAGACAGGTATTCCATAATCTGCACAACCTCAGTCATCCGGGTAGAAAGGCT
ACAATCAAACTCATCACCGACCGCTTCGTATGGAAAGGCATACGCAAGGACTGCAGCAGA
TGGGCGAAGGAATGTCAGGAATGTCAACGCTGCAAGGTGCATAAACACACAGCAGCACCT
TTGTCCCAGTTTAAACTACCTACTGCTCGTTTTCGTCACGTACACATGGACATTATCGGA
CCTTTACCTATTTCTGATAGTTACAGGTTTTGTCTTACGCTTGTTGACCGTCACAGTAGA
TGGCCCGAGGTAATTCCCCTGCGCGACATCACCGCAGAGACCTGCGCCAGCGCCTTTGTC
GCTGGCTGGGTCGCCCGCTTCGGCTGCCCAGAACACATCACGACCGACCGGGGCAGGCAA
TTTGAATCTCACCTGTTCAAAGCTATTGCTACCCTGGTCGGCACCTGCCATCACACAACG
ACAGCCTACCACCCCGCAGCCAACGGCCTTGTCGAAAGGCTACACCGACAACTTAAAGCA
GCCGTCATGTGCCACGCCAACCCACGATGGACCGAAAGTCTTCCCATGGTACTTCTGGGC
ATCCGCAGCGCCTGGAAAGATGACATCCAGGCATCCGCAGCAGAACTGGTCTACGGTGAG
CCTCTCCGCTTACCTGGACAGTTCTTCAACACATCCGCAGCACCCCCAGGAGACGACAAC
GACCTGGCTTATCGACTACGCGGACATATGAACAAACTTGCCCCTCGACCGACTACATGG
CACAGCGAAAACCGAACCTTCTACGTGCCTAAGGACTTAAACACGACATCCCATGTGTTC
TTGAGGCAAGGACCCCTCCGAAAGTCGCTCGAACCACCATACATTGGCCCCTACAAAGTC
TTAAGAAGAGGATCGAAATCGTTCGACATTGAGGTAAATGGCAAACAATTAACTGTCACC
ATAGATCGCCTAAAACCTGCCTATATCACGCGAGACGATGGCAAGAGAGAAGACAAACAG
AAGACCAGCGAGGCGAGCGAAGAACATCAGCGTCCAGTACAAAAGACGAGAAGCGGCCGT
ACAGTCACCTTCCCGGACTACTATCGACCGTAGCTATCGGTCTCGGCGGGGGAGTACTGT
GGCATCATCCTGCCACGGCTACCTGAGTGCGGACCTGCGCGCAAGAATCAGGTGATGCGT
GCGCGCGCCAATCAGGAGCCAACGCGCGGCCGCGTTATCGCAGGTGACGCCGGGCTGCTG
CGCCGGCAGTCCGCCACAAAGCCTCGTACTGATCGCGCGTTTCTCTCTCATTATTGTAAT
TTCATATATTTGTTAGTCGTTTGTTTTGTGTCTCGTTAATTTGTTAATAATCTGTAGTGT
ATCGTGTTGTCGTAATATAGAACTATTTCTCGTATTGTTTCGTTTAATTTACCGACATCG
CTTTGCTTGTGGCCGGACGCCGTTCGGGTTCGATTCCTGGACGTATCGACTGTTAGTGGG
TTGATACCTGAATATAACCCGCTACAGGTTTATAATATTTCTAAGCGGATATTCGAAATT
AGAAGTCTTTTAGATTGACTATAATTAACTACGACTAAACCAAACTCACCCAGAATTCAA
GAAGAATCCACCAAATAGCATAAAGGGGATGATGATTGGAGGACCAACGGAGGCTGCCAT
ACTGACGCTGCTGCTGGCACAGGATATTAAATAACCTGAATAGGAAAATGTTATTGTTAT
AAAAAACAGGATGAAAAATAATTGGTAGAAATTACACCAGTCGGTACTGGTCAACTACTC
ATTTTTGGTTGGTTCCTCATTTGGTTCCTGTACGATGGGCCGGATAACCAATATAATTAA
GATGGGCATCATGGTACTGAGGGGGCGGGAGCATTAATACCGTGGCTGAAGGGAACCACT
AACCGTAATGGACCGTATGGGGTCGATAAACAGTACGATTGATGAATATAGCAAGATTCG
TGGTTCAAGTGACAAGTGACATAAATAAGCCCGAACCTTCGATCCCTAAATGTCTTTAGT
ATCATCGCCGTTTTCTTTTCTTTCTAGCAATGCTGCCTTGAGAGGCTATTTCAGCTT
(4917 bp)

- SilkBase 1999-2023 -