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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41104_c0_seq24
Scaffold_idBomo_Scaf116
NCBI non-redundant
(nr)		PREDICTED:_src_substrate_cortactin_isoform_X1_[Papilio_polytes]
Ontology
GO:0001726 C ruffle
GO:0002102 C podosome
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005925 C focal adhesion
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008076 C voltage-gated potassium channel complex
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0030041 P actin filament polymerization
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030516 P regulation of axon extension
GO:0030838 P positive regulation of actin filament polymerization
GO:0030863 C cortical cytoskeleton
GO:0031532 P actin cytoskeleton reorganization
GO:0042995 C cell projection
GO:0043197 C dendritic spine
GO:0048041 P focal adhesion assembly
GO:0048812 P neuron projection morphogenesis
GO:0048870 P cell motility
GO:0097581 P lamellipodium organization
Transcript
Level		FPKM:76.14 TPM:60.16
ORF EntryO_BomoMG25061_complete:A_BomoMG_comp41104_c0_seq24
Sequence
(Nucleotide)
TTTTTTTAATGCATAAAGTTCAATTTATATAGATTTTACATGAATACATATAAGCATTCT
GGTCAATTTATATTTCTGTCGTCGTATAAGCCGTATCTCGTACTGGTTCATCGTTTATTT
CTGCTGTTATTTCTTGCGTTCCAATTCTCCATAGAGCTTATAGAAGAGATCCCAGAAGGC
TATCCGTTGGTGGAAGGGCCTGCCTTTGAGCTGCAGGTCGGTGTCGATGTCCAGATACGG
CCGCTTGTTACCTTCTACTGTCGACCACACGACCGGCAGCAGGTCCGTCGGCTCAGGGGT
GGGGTTGCCGTATTTAGCAAAATTAGCCCAAAGAGTAGTGATCCTATCGATGATCAGTTG
GTCCTCCTCGGCGATGTGTTGTCCCGGGACCGCATCCACGGCCAGCAGGTAGCCGAGCTC
GTCCGCGTGCGCAGCGCCCTCCGCCGTTATGCCGAGGTACTCCTTCATGGCATTCCTGCC
TCCGTCGTACGAGAACACGTAGTAATATACCTCCTTGTTACCGTCGGCCAATGACTTCTT
TATAGACCGTTGGACGGCGTAGTTGAAGTAATAGTCCGACGCAAAATCTATAAACTCATC
GAAAAACTCCTCGGTCAGCGTCTCGTCTCCGATGTAGAAATGTCTCACGTGGTCTTTCAT
CTCGTTATCAGTCAAGTTGAAAGCCCGTTCCAGAAAAGTTCGAATTCCTGTCACCTCGTA
GTCTTCTGGGGTCACATAAGCATGTAATGTTAGAAATTCTTTATTGGTTACTCCATAAAT
AGCAGGAATGTTTCTAGCCTCTAAATTTTCAGGAAAGTCGGAAAGAAAACTGTCAACTCC
GTCGTATTTGTTTTCTCTGCAAGGTTTGAGTGTACCGCCTCTTAAGGTAGAGCTTTGAGA
AGTGCTGGCTGCAACCACCAGGTGGGGGTCTTGATCGGCCAGAAACTTTACCGCCTCTAA
GAAGTTGTCAGTTTTGAATCCCAGCTGGCTTGCTATTTCTATTGGAACACGGTTTCTAGG
TTGCCCAATACCCCCAGGAAAGAAAGCAGATCCACTCTGAATGATCACCTGATTGAACAG
CTTATCCTGGTCGGTCAGTAGGTGTAGCTCGACAGCGGCGCCGCCAGCACTTTCTCCAAA
TAAGGTTATTTTAGAGGCATCTCCGCCGAACGCTTCGATATTTTCCTTAATCCATCTCAA
AGCAAGAACTTGATCCTTCATACCCTGGTTGCCGGGAAAATCAGGACTGTCCAAACATAA
GAACCCATAGAGTCCGAGTCGGTAGCTGACCGATACGACGATGACGTCATGTCGGACCAG
GTCGTCGAAGGAGTAGTCCCGCTCTGTCCCGCTGCCGCTAGTGTATCCTCCTCCGTGGAT
CCAAACCATCACGGGGCGCTTGTTGCGCGATGTAGCCGTGTTTGAGACATAAACGTTCAG
GTTCAAACACTGGAGACTACCAACTCCGACGTTATTAGTAACTTGAGGACAAACTACGGA
ATCATCGTACGCTTCGAATGTCTCTTCGAAACCAGGGTGTGGTACTGATGGCCCGAAAGG
ATTGTCCTCGTCGACTAGTGCGTACGGTATGCCCAAAAACTTCGAGAACTTTCCATTTTC
GGACCTCAGTCCCCTGATGAGGCCCCGCTGAGTATCAACAAGCGGGTCTATCCTCAACCG
GGCAGCCACCGCCGACAACAAGCCCAAAAGAGCAACCAATCGCAGCATACTTGCACTGGA
AATGCGCTGTTTGTGCGCTGTCAGATATTTTATATAAGACCGGTAGTCACTTCCGACAAA
ACACTTGGACGCCAGATGTGCCACGAACCGAGGTCGGGCAATCGAACGAACAATGAGCAC
GTCCACGCGCGTCGGTTGCTCAAATCGGAATGAGCACCCCACGCTTTTTTTTTTACAACC
AAATCATTTTTTCTTGCATTATTTTTAATTCAAATTTATTTTCTATTTTTTAGTTGGATT
TTCTATAAAAGCGTATTTTGTTAGTTTTTTTAAACTATTATTTATTTTTCATTTTTTAGT
TGAATTTATATTTTTACAAATATTTTTTTAATATTGAATTCTCATCGGTCCTTAATAAGT
ATACCAAATTTCGAGTTAATCCGACGTTTTGAAGGGGGTCAAAATCATGTTCAAAGATTC
CGTTACAAACATACATACGTCTGAAGCTAATAAAAGCGTATTAAACATTGCATGATACAA
TCGAGCGAAGCAGAAATCGACATAGCGAATGTCCCTGCCGCTACCGATGCACACACTTAC
CATCAAGTCAGTTTGGAGATGCACATGCTATCTTACAGAATAAAAGAAATAAACCTCTCT
TCTGAAATACTATATTTCGCATGAGAGCCCACGGGAAGACTTGTTACATTGATTATTTTA
TTTAAAAAAAATATTACACTTTCTATGTAATGATCAGTCACGAATTTATAAGTCTACATA
CATTAGAACGTCTGAAAATAATAGTACTGTTTGCAAAAACAATATTGTCGCGTTTTTTTT
AAGAAACATTATTTAATTACGCGTCAGATGGCGCGTGAGTAGTCTCTACTTATAGACATA
TGTATTAGATACAACTGTACACACTTAAAACAATGAAAGGTCATTTTCAGTAAATAACAT
CGCTTGTCTTATGGTTTAAAATTGATAATTTCAATTTGAATTATAGGAAAAATATTTAGA
TCATGTTTCGACGGTACTTTTGGTTCGTCCTATAATTTTCTATATTTTCATATATTCAAC
GTTGATTTTGGAATGTATTTTTTATTTTATTTTATTTCTATTTATCTTGTAACTGTACGT
AGTTAGCCGGGAACAGACCGTAGGCGCCTTTACATAATCCCTGCCACCAACCCTCGTCGA
TCATGACGATGTTGGTGATGACGTCATCAGGATCGAAAGATATCTCGTCGGGCGCGGCGG
CCTGGTAGTCGTACAGCGCCCTCGCGGTGTAGCCGTCCTCCTCGTCGCCGCCCTCGTCCT
CCCCCTCCCACCCCACCGGAGACACCACAATGGTGGGCTGGCGGTTCATCTCTTCTTTCC
CCTCCTTAGCTTCTCCCACCAGGGTGACATCGGGCAAGTTCTTTGTTTCTTCTTTCACAT
CCTCTTCCCTCACAATCGCTTCTTGTCTTGCATTATTACCAACTGTGACATTGTCTTCCT
CTCTTGCTGCCTCTTCTCTTGGGATCTCCTCTTGGACAATCTCTTTCTTGACTTCTCTTT
CTTTGACCTCTGCGGAGTGTGGAGTGGCTCGCAGTACGCTGGTCGGTGTGTCCGGCGTGG
GCTGCAACTCTTCAGGTTCGGGAGACTCGGGTTTGTTGGCTACGCGTTCTCTCTCCTTTA
GCGAGATGTCCTTGTCGATCTTTTCCCTCTGCTGCCGGATCCTCTGCACCGACTGCAGCG
CCTCCTCTTCTTTTTCCTTGGCCATGTTTTCGAACTTGGCCCGTATGGACGAGGGCTTCG
CCCCGCCGATGTCGGGCTTCGGTCTCGTGTAGTTGGTGCCGACCTTGTCCGCGGCCCCGA
AGGCGTGCGCCGACTTGTCGACGCGGTCCGACTGCACGCCGAACTTACCGCCGAAGCCCT
TCTTGTGGTCGAGCTGGCTGGCGTGCGCGGGCGTCTTCTCCTGGTGGTCCCAGCCGACGG
CCGACGCGTCCTGTCGGTCCGTCTGCACGCCGAACTTCCCGCCGAAGCCGATGGCGTAGT
CTTTCTGCGAGTGATGTTGTTGCGCGTCCTCCTTGTGGTCCCAGCCCAGCGCGGAGGCGT
CCTGGCGGTCGGCCTGCACCCCGAACTTGCCCCCGAACCCGACCGCGTAGTCTCGCTGCG
ACGGGTGCTTCTCGACCTGCTCGCGGTGCTCCCAGCCCGCCGCGCTCTTGTCGACCCTGT
CGGTTTGGACGCCGAACTTGCCTCCGAAGCCCTGCGCGTAGTCGGTTTGCGAAACGTGCT
TCTCTACTTTGGCTACGTAGTCGTGCCCCACCGCAGACTTATCCATGCGATCCGCTTGGA
CCCCGAACTTGCCACCAAAACCTTGAGCGTAATCTTTCTGCGAAACGTGTTTCTCGGTCT
TGCCAACATAGTCGTGTCCAACGGCTGATTTATCCATGCGGTCAGCTTGGACACCGAATT
TGCCACCATATCCAAATGAAGGTTTCGGTCCAGCCTCATACTGTTTCTTCTTGGCTAATT
TGTCAGCTTCAAATACCTCTTCACGTAATTTTGCCATGTCAATTGCCTCAACATTCCTTC
CGGCGGGCCCCCATCTTTGTTCCTGTTCACTCACATCATTAACATAGTCGGGATCTGTTT
CCCAATCATCTGCTTCAGCAGGCTCTGGTGCCTTCACATTAGTAGCAGCTTTCCACATCT
TATTCCTTTGAACCGGTTGAGGAAAACAAACACGTTTTTAAAGTTCTATTTTAAACTTTC
ACTTTTAACGCATAAAAAATTATCGACTGGTTAAAATGTCATCGATATATTTTAATGGTG
AGAATTTTTTAACTCTAAAAAACGTTTTCTCAATTTGTTTTTACTTTCATATTTTGTATT
TGGATAAAATTTTGGGCGATGGTTTTTGTGATGCGTCAGCCTCTG
(4605 bp)

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