SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41096_c0_seq3
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_verprolin_isoform_X2_[Bombyx_mori]
Ontology
GO:0001105 F transcription coactivator activity
GO:0001701 P in utero embryonic development
GO:0001764 P neuron migration
GO:0001889 P liver development
GO:0003007 P heart morphogenesis
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0010467 P gene expression
GO:0010468 P regulation of gene expression
GO:0030036 P actin cytoskeleton organization
GO:0030154 P cell differentiation
GO:0030900 P forebrain development
GO:0031175 P neuron projection development
GO:0045844 P positive regulation of striated muscle tissue development
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048514 P blood vessel morphogenesis
GO:0048568 P embryonic organ development
GO:0048738 P cardiac muscle tissue development
GO:0051145 P smooth muscle cell differentiation
Transcript
Level		FPKM:2.15 TPM:1.70
ORF EntryO_BomoMG24887_complete:A_BomoMG_comp41096_c0_seq3
Sequence
(Nucleotide)
GTATTAATATATGGATAATTTGATTTGAAAGAGAGCCGATCGTCGTGCGGTGGAGGCGAG
GGCTCGGAGGGCTCGGACGGGCGCGTGTCCTGGCGCGTGACACTCGACCACGACCTGGTG
GAGACCCTGAGCGCGATATATCCCGAGTGGTTCAAACCACAGCAGCGTCGCGACCGCAGC
CGCGCAGCCTCGCCGGTCTCGCCGCCTCACACCCCGCCCACGCCGCCCTCAGACGACACG
TTCAGCTCTGGTGCGGAGGAGATGGCTGGACGGCAGGCGAGCAGCAGCGGCGCCAGCGAG
CCGTCCAGCTCGCCGCGCGTGTCGCCGCCTAAAGTCATCGTCGACGACAGCCCGCTCCAG
CCTGCCATGGGGAAGCATAAAGAATCGTTGAAAGTGAAGCTGATGATGCGCCGGCCCATC
AACCAGCTCGTAGCGCAAGGAATAATGCCCCCATTAAAAACACCGCCGGCGTATTTTGAA
CAATGCAAGCAACTAGAGAGAGCCAAAACAGGCGATTTGCTGAAAGCAAAAATCCAACGG
CGACCAGATCGTCAAGAATTAGAAAGGAGACATATTTTGGAACAAGAAAGCCATGTGGAT
CCGAGTTTGGCTGAAAAACAAAGGATGCTGAAAAAAGCACGATTAGCGGATCAACTCAAT
GACCAGCTTTCACACAGACCTGGTCCTTTGGAGCTCATCAAGAAGAACATACTTCACACT
GAGGAGAATATAGAAACTGCAGTAAAAAGTGGAATACTCGCATTTAAAGCGACCAGCGAG
GGCGCTTCCGGCCGACCCCAACATCCTTCCTCGTACTGTGGACCACCCGATGAAGTATCA
CCTTCACCGTCACCTCCTTCCACGCTCTCACCCATAAGCGTGACCTCGCCTCCGCAGCAC
CCTGCTCCTGGCAAGGAAAAAAATCGAAAGAAAAATAAACAAAAACAACAACCAAAGGCT
CGATTTAAATTTCATGAATATAAAGGGCCTCCGAACGCACAAAAAGCGTCTTCACCGCCC
GGAACGGTCGAGACCCCATATGAACTTTTATTGCAACAGCAACAGCTTCTCTTACAGCTA
ATGTTGCCCGCGTCTCCAGCGCCGTCAACCGCGTCCGTGACGTCAGACTGCTCCGACGTG
CTGCCCGCGCCTCCCCCGCCCCCGCTGCCGCCGGCGCCCCCCTCCGCGCTCTCGTCACTG
TCGCCCTCCCTACCCGTCGCCTCGCGATTTGAAGATATGAAAGTGTCGGATCTCCGGGCC
GAATGTAAACGACGGAACCTACGAGTGTCCGGCCCAAAGCCACAGCTAATAGATCGATTG
AGGCCCTTCCTCGTCGAGAAACAGGAAGAGGCTCCGAAGTCACCGGTGTCCGTCGCATCG
GTGCCTTCTGTAGCTTCAATGGTTTCCATTGCGTCTCCGGACCCTCGAATCAAGATCGAA
CCCCAAGAAGATATCGTTCAGTCGCAACGCCGTCAAATCGAGGAGCTCGAACGTAAACTA
GAGGTGTCGCGCCAACAGCTGGAAGCGGTGCGACGCGAGGCAGCCGGTGCCGCCGCCAGT
GATCAGGGTCGACGTCTACTGCAGGCGCATCTTTGTGTAACGCAGCTCCGTGCCAAACTG
GATGCCCTGCAACAATCCCCGCCACCACCACCCCAGCCTCAATACGTACGGCTCTTCACA
ATGACTCCACCCGCTCCGAATCTCGACACAACTGTCGATTCTACACTTCAAAAACCTGCA
AATCCTGCATACATACTGAACGGCGTAAAGGTGGTACCCATAGCGATACTTCCGACGACG
CATTATGAACCGGAGCGACTGGCACCTCCTCCTCCTCCGCCACCACCTCCCCCGCCGCCC
CCGCCGCCGCACGTGTCCTCCCCGCACGATCATAACGAGGAAAGTCAGATTATGGATGAC
GTGCTTGAAATTTTAGTAGAGAACGGTGAATTACCACCTTCGGCCGTAGGCGACGCGGGG
GTCGTCGCTCCAGTCGTGGATGTGGGATATACGACATCTAATGATTCGTTTTCACCTCAC
GAGGTACTTACCGATGACCTTCTCGGCGACACGCACGTGCGAGATTCACTCGCCGCGGAC
GAACTGCAAAGAGAACTCGACGACATTCAAAATGAAATAATGAATCACGTCGATCTTCAT
CCCGTACAGTCTGACGAAAGATGTAACGGAGAGCGGCGGGCCCCGGACATCGATGCGGAT
CTCGGCGTCGACATCTTGAACACTGGAGACTTCCATCCGGATTTCGTTTCCGATCCGAAC
GGCGCCGACGACGACTTCTTCGAAAGTCTTCTTTCCGGCGCGACAGACGACGGCTCTCAC
GTCCCGATGGACGTCGGAGAAGACCAATCTGAGAGAACGGTCGAGACTCCCCTGGCCAGC
GTCGACATCCTCGATCATGTCCGGACCGGCTTCGATTACATGGATGACTTGTCGCTGCCG
TCGTTTCCTCACGACGAGCACCACCACCACGACAGCTTCGAGAGGCGACCGTGTGAGCTG
GACCTTAAGGAGTGCGGCATCGACATCGGGCCGAGCGCCGCGATGGACAGCGAGGGCTAC
GACTACATGGACACGGAGATGATCCCCAACATGTTCGGTCGCGGGCACGTGCCGCAGTGC
GACCCGCTGCTGGGCGGCGTGCTGTCCCGCCCGGCGCCGCGCCCCGCCCACAAGCACTAC
TCGTGGGAGCGCATCGAGTACGACGCCACCTGACCCCCCGCCCCCCACCCGCGGCTCCGC
GCCGTCCGTCACTCGATCAGCGGGGGGACCCGAACGTAGACGTTGTTCTGTGCGCGCGAC
ACAAAGTGTTCGCGGTCAACGAGACTCTGAATAAAGTTATTGGTGTTTGTACTTAACGTC
GGCACGAACGCTCTCGTGTCGCTAGATAGTAGTTGAAATGTTTCATTCGTGTCACTTGAC
GCGCGCCGACCGGGATCGTCGCGCATACTTGGCTCATCTGTATGTTATAAGTTCATTTTA
TTTTATATTTATAGCATATTTACTTGTGTATATATTGAAATTAATAATACTCAACATAGT
TGTGGAAATCTGCATTCCGCCCGATGACTATAAAACTTAGGGGAAAATCGTCATAGGAAA
TCTTTATAGGCACACTAACGTTTCGACCTGTCGTATCTTGAATTGACTTGCGCAGAGCTT
ATAAGATTTCTCATGTTAGTTTGGTGTTGTGTCTATTTATTGAAATCAAATAAAACGCTA
TCTTGAATACTTAGATAGCTATTTCCCAGTAAATAAGTGACATTCCAGTCTTGTTGAAAG
TGCTAATAAGCACAGTCGCCTTACAGTGCTTCAATAAATTTTGTTCATCACTAAAAAAAA
ATGCGTTTAACTGAAAAAAAAAAGTGAACAAAGAGCACATTGACAAGCCATCGTCATGGG
TGGGACCAGCTTGGGAACAATGTTAGTTATGAATTCATTAGTTTATTCAGGGGGGCAACT
CCCAACACTCCAACAGTTGAGCAAACATTGGTTCACTATCACTTGTCTGACACTCCGCTC
ATACCTAAGTTCTTGTTAAATTATACTATTATATTTCTTTATGTAAGTGTAGCATAAAAG
CTTATACGAAACTTGGTTTTCGTTAATTTGAGTTTCCCTAATTCTTATAGATTTATATCA
ACATAACATTCTTGAAAATGTATCATTCCAATTTGTCTAAAACGTAGGCTAGGTGCGTCG
TAATAAGTTGCTGTTTTATACCTTGTATTTATCCAGTAGTTGTGCAGTGAACTTAAATCA
AACAAGGAACTGTGTATTCGGAATGTTTGCGCAATTGTTGGAGTGGACTATTTATTATTT
ATCATTTACAACTCGATTGTACTGTCTTAAGAATTTGTTCATAACTAGAAGAATGTGTGA
GTGTTTTCACTAATGTGTTTTGTATCTGCATCCATTGGTTTTATCTTGCGTTAACTACTG
CTTTGTCGGCGTGAGATCAGTAATGCTAAGGAATATTGCCATTTTTGCATTTATGTTATT
TGATTTTTGAATACTTGTTGCTACAACGAAAAATGGACACAGATTACTCCTGCATCATTT
GTGTCAATTAAATCTGTGGCGGAATAAGTGTAAAAATATATTTAGAGTATACCGCATTCA
TAAGCTCTATGTACATTATTTTTTTATACAATAATTAACCTAATTTTATGAATACTATAT
AATTGTTAATGTTGTGGCTACATTAGTGAGTCTCATTGAAAGCTTGCATTGTTACGTTTT
GTTGGTCAGGTCGCAATCTGTTCGGTCGATTAAGAATAGTCTGTCGCGATTCCAAAAATT
ATGTTTCGGTAAACTTTGAAACTGCAGTTTCTACATAAACTCGTATATTGTTATAAAAAG
CACGAGTCATTCACTATTGTGAATTTAGCAAACAGCTAATTACTTTCAGCGACTTGCTCC
CATAAATATTCGCACGTAAAGCAATGCAAAGTTAGATAATTTAGTGAGAAGTCAGTTAGG
TGGTGGTAGGACTTGTGAGTCCGCGCGGGTAGGT
(4534 bp)

- SilkBase 1999-2023 -