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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41091_c0_seq2
Scaffold_idBomo_Chr27
NCBI non-redundant
(nr)		PREDICTED:_lysine-specific_demethylase_lid_isoform_X2_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0032922 P circadian regulation of gene expression
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034720 P histone H3-K4 demethylation
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0043970 P histone H3-K9 acetylation
GO:0043992 F histone acetyltransferase activity (H3-K9 specific)
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070822 C Sin3-type complex
Transcript
Level		FPKM:4.29 TPM:3.39
ORF EntryO_BomoMG24697_complete:A_BomoMG_comp41091_c0_seq2
Sequence
(Nucleotide)
CAATTTTGCATGGCGGACGTGCAATTGGATTGTGTTATTTGTTGGTGATCATTTTAATAA
TTTATCTCTTGTAGATTCCTTATGGAAAGACTACTTTTAATAATTTTATTCCTTTGTGGT
CGTGCTTTATTCATACCTTAACGATAGATGATGCTAAAGTGTTATTTATAGTTGCATTTT
GTGAGAACTGCATAGTGTATCTCGAAAATGGGAAAATGTGACGAAGCTAATGTCGAAGTT
AGCATGGGGGACTCAGCGTCCCCCATGAAACCTGATAACTTTACGTTTACTCCACCTCCA
GAGGCTCCTGTCTTTGAGCCTACACCAGAAGAGTTTTTGGACCCTTTAGCGTACATCAGT
AAAATACGTCCTATCGCCGAGAAATCGGGCATTTGCAAGATAAAACCACCAGCGCACTGG
CAACCCCCATTCGCAGTTGATGTGGACCGACTACGGTTTACACCGCGAATACAACGGTTA
AATGAGCTCGAGGCAATAACGAGGGTGAAGCTTAACTTCTTAGACCAGATTATAAAGTTT
TGGGAACTGCAAGGGTCAACGTTCAAAATCCCGACTGTCGAAAGGAAACCGCTCGATCTC
TATTCGTTGCATAAGATTGTGAAAGAAGCCGGGGGCTTCGAAATATGCTCAGCAGAGAGG
AAATGGTCGAAGATAGCCCGCCGCATGGGCTACCCGCAAGGCAAAGGCGTCGGTTCAATA
TTGAAGAATCACTACGAACGCATCCTGTATCCTTATGACGTGTTCAAGAACAATGGAGCA
GTCGGAGACAATAAGGAGACAAAAATCGAAGTCAAATCAGAACAGACGCCCGAGAAGGCA
ACGGCGACGCGGAGTCGCTCCACGACAAAATGTCCCCCGGGGGCCGCGGCCACTCCGCCC
CCCGCCCGTCGGTACAAGTCCGAGCCCGAACCGGCAGCTGAAGGTAGTCACACCGAAGGC
GCCCTCGTCGGATCTGAAGATTCGATTATGAAAACTCCCATTAAAGAGGAGAACCCCGAA
ATAAGACGGACAAGTCCTCGTGAGAACAAATGGATGTCGGCGGGAGCCAGTTGCGGTTCG
CGAGCGCGCGTGACCCGCTCCACCCGTCTCCGCGAGCATCGCGTCAACAACATGACGGTC
TCCGTGACGCCTGCCCCGCCCGCACCCAACACGCATCCCGATGATCCGTTGGCGAAGTAC
ATGTGTCACGTGTGCGGCCGGGGCGACGTCGAGGAGCAGATGCTGCTGTGCGACGGCTGC
GACGACTCGTACCACACGTTCTGTCTCGTGCCGCCGCTCGCGGACGTGCCCAAGGGCGAC
TGGAGGTGTCCAGTGTGCTTAGCCGAAGAGGTATCGAAGCCGACTGAAGCTTTTGGTTTC
GAGCAGGCCACCCGCGAGTACACGCTGCAACAGTTCGGCGAAATGGCGGATCAGTTTAAA
TCAGATTACTTCAACATGCCCGTGCACATGGTTCCAACGTCGACCGTGGAAAAGGAATTT
TGGCGCATCGTATCGTCGATAGACGAAGATGTCACGGTCGAGTACGGAGCGGACCTTCAC
TCGATGGACCACGGCTCGGGGTTCCCGACCAAGTCCAGCGCCCACCTGTACCCTGGGGAG
CAGCAGTACGCAGACTCCAGCTGGAACTTGAACAATCTACCGGTTCTGGAGGGTTCTGTG
CTTGGACATATCAACGCTGATATCTCAGGAATGAAGATACCTTGGCTGTACGTGGGCATG
TGCTTCGCAACGTTCTGTTGGCACAACGAGGACCACTGGAGCTACTCCATCAATTATTTA
CATTGGGGAGAACCTAAGACATGGTACGGAGTGCCAAGTTCAAAGGCCGAGCAATTCGAA
GCTGCAATGAAGGCCGAAGCTCCAGAGCTGTTCCAGCTGCAACCGGACCTACTGCACCAG
CTTGTCACGATCATGAACCCTAATGTTCTGATGAAAGCTGGTGTTCCCGTTTACAGAATG
GATCAACACGCTGGAGAATTCGTGATCACGTTTCCTCGCGCTTATCATGCCGGCTTCAAC
CAAGGCTATAATTTTGCCGAAGCGGTTAACTTTACTCCAGCTGATTGGTTGAAAGTGGGC
CGCGAATGCATCGCGCACTACTCCACGTTGCGGCGCTACTGCGTGTTCTCCCACGACGAG
CTGGTCTGCAAGATGGCGCTGGAGGCCGACTCGCTCAGCCTCAGCGTCGCGCTGGCCGCC
TACCGGGACATGCGCACCATGCTGCACGACGAACGGAAACTCCGGAAGGGACTGCTGGAT
TGGGGTGTAACGGAAGCGGAACGCGAGGCCTTCGAGCTGCTACCAGACGATGAGCGGCAA
TGTCACATGTGCAAGACGACGTGCTTTCTGTCGTGCGTGACGTGTCGCTGCACGCCCGCC
GTCGCCTGCCTGCGACACTACGTCGAGCTGTGCAACTGCAGCCCGCAGGCGCACAGGCTC
AGATACCGTTACACCTTAGATGAGTTGCCAGCGATGCTGGAGAAACTAAAGAAGAAATCA
GAACAGTTCAGGGAGTGGGCTGAAGCTGTGCAGAATGCTCTAGATCCAGATACGCCTAAG
ACTTGTGATTTAGACGGACTGAGGGCGCACTTGAAGAAAGCTCACGAACTTAAGATTCAC
AAGACCGAGCTAGTTCGTGCTTTAGAAACGGCTATAGAAGACGCCGAAAAGTGTGCTTCG
GTAATACAGCAACTGGACTTGAACAAGATGCGGACTCGAACCCGACACCACGACCCCAAA
TACAGGCTGACCATACACGAGCTCACTTTGTTCGCGGCAGAAATTGACGGCCTCGCTTGT
GTTTTGCCCGAAGGTTCAGCTGTCAAAGAAGTCTTACGTCAAACGTCAGAGTTTGAGTCG
AAAGCATCGGAATTGATCAACAAAGACCTGGACAAGATTGAACCTGGTTACGTTAGGGAA
TTAGAAGAGGTTGTAGATTTAGGATCTCGGCTCTGTATAGTGCTGCCGCAACTGGCGCCC
CTGCAGGCGCGGCTCCAGCAAGTGAAGTTTGTCGATGAAGTGCAGCAATACAGGGACGAG
TGCTCCACCCTCACTCCGGAGGTCATCGACCGGCTGTTGCAGGATGCCGAAAAACTTGTA
CCTCATCGCAGGGTTGAACTGGAGAGGGCTGGACTATACAAATTGAAAGCCCTAGTAGAA
GAATGGGAGGAACGCGCCCGAGCAGTCCTCATAGATACAACAAAGTCGAAAGATTCGTCG
GAAGCGGACGAGCCGCAGTACACGACCCTGGCCGAGCTGAGTCTGCTGCTCGCCGACGGT
GATGAGATCGAGGCGGCTCTGCCCTCGTACCACGCGCTGCAGACCGCCGTGGCTCACGCG
AAGGACTGGCTGGCCAAGGTTGAAGAGATGCAATCCAAAGATCTGTACCCGTACATGCAC
AGCGTGGAGTCTGTTGTGCGTCGCGGGCAACAGATCCCGCTGGCGCTGTACGAGAAGGAT
CAGTTGGCGGCCGCCCTGCAGTCTGCGAAGGAATGGAAACGTGGTGCGGCCGAAATGTTT
CTAAAAAAGAATTGGCCATATTCGTTACTGGAAGCCCTGTCGCCAAGAACTGAAGGCGCC
GAGAGCTTATCAACAGCGCGGCGCCGGGCGCGAGCCGCCGTCGGAACCGAACCGCCTCCC
TCGACGTTAGAGGCCGGCTTATTCCTCAGGAACTTCAGCGAAGACTCCACCCCCACAGAA
ATCGTAGCGGCGTTCAAACAAGCGGAGATTACTGAACTCAATTCAATAAAAACTTTAAGA
GCCCGTAACATGAGGAAGGAAGTCCGGGCCCCACCCGCGGCAGGCGTCACGTTTTGCGTC
TGCCAGAAACGGCAATATGGTGTCATGACCCAGTGTGAGCTGTGCAAGGATTGGTTCCAT
GCTTCGTGCATATCATCGATGAAGGACGAGCGGGAGGAGTCGCCGGACCGCGGGGAGGGC
GCTCCGTTTTCAGGAGCCGAAAGTAAATTCCTGTGCCCGGACTGTATGAGGACCAAACGG
CCCAGGCTGGACCGGATCTTGGGGCTACTGGTGTGGCTGCAGAAGCTGCCGGTCCGGCTG
GCGGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCCATGTCGTGGCAGGACAGCGCG
CGGGCGCTGCTGGCCGCCCTGCCGCACCGCGCTGATATGACGAACAGAGAAAAGGCAGAT
AAACTGAATGCTGAGTTAAAGAAGGCAACAGGAAGAGCTCATGATCTCCATAACGCGCAT
AATCCAAGGTCGTCGGCCAGCGTGGAGCACGCGTACAGCGCCACGCCGCGGTCGCCCAGC
GCGAGGATGGCGCCCGGCATGCTGCACAAGCTGGAGGAACTCATGCTCGAAGGCGACCTC
TTGGAGGTGCGGCTAGAGGAGCAGGCGCAGGTGTGGTCGGCGGTGTGGTGCGCGCGCGCC
GCCGACGGACGCAAGGCCACGCGCGTGCTCGACGCCGGCCGCCGGAAGCGGCAGCGACAG
CAGCGCCACCACCATCAGCTCAAGAGGACCCGGACCAGGCATCACCACGGACCTACAACA
ACGAAAACATCAATCAAACGCGGCTCGGCCACGACGACTAATTATCTCAACAGAAAGCAG
GGCGTGTCGTCGGGCTCGAGTCTGATGATGAGGAAACATTACATGGCGCGGCAGGAAAGA
CGTAAACGCGGCCTCGCCGCTGCCCGGGGGAAACATTCGTCGAGGGGAGATGGCGCGTCA
CACAGTACCGGAAGCCGGGCAATCGCGGCGAGTCGACGGAGCAGCTCATCCTCGATGTCC
TCCGCTGATGATGACGAAGATTGCGCCGCTTCTAATTGTCTAAGGCCTACTGGTAAAGTT
GATTGGGTGCAGTGCGACGGCGGGTGCGACCAGTGGTTCCACATGCACTGCGTCGGGCTC
AGCCGCGGCGCGCTGCGCGACGACGACGACTACGTGTGCGGCACGTGCGCCGACGCGCGC
TAGCCCCGGACCGTCAAGCGAAAATAGCTCCTATAGTGTTTCGTGTAAAGTGTTAAAACG
AGTGCGCGCGTTGGACTTCCAAAAGAACATCGATTCGATTGAAGCCATTCAAAATATATA
TATCGACGCTTGAAAGG
(5117 bp)

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