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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41088_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		blastopia_polyprotein_[Lasius_niger]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.85 TPM:0.67
ORF EntryO_BomoMG24667_5prime_partial:A_BomoMG_comp41088_c0_seq1
Sequence
(Nucleotide)
TTTTTTTCTAGGGTTTCACAATACTTTTTATTTAATTCTTAGAGAGCACTTTGAACACGT
CTTACTCCTAATGGCGGCGTCGTGCGAGAGAGCTACATCCGTCCCTTTCACACATCATGC
GTTCAGAATCTTTCACTCGTTCAGAAATGTTTTACAATAATTAGAAATGTTAGTAATAAT
TAAATCCTACAACTCGGCCTTCCTGCACATCAGTCTGGCCTCAGACTGAAAGTACTGAGA
TAATAAAATAGTTCTTATGAATTAAAAATAAAAATAACAAAAATAAAATCTCTAACTTTA
CCTTAATTTACCTAATACTACTACTATGCAAATTTTTTTTCTAAACATTTTTACACAATA
ATAACGCTACAAAAATATTTTTAGTTAAACCTTATACTACCTATTACAAACAATCATGCT
ATAACTCTGCACACAGCTAATAAAACAAATAGTAATTACTCTTACTTAGTACATAACACA
ACAAAAACAGTAGGTTTAAACTATCAGTTTAGAGGCAAACAAGTTACAATGACAGAGAAC
AGCAATGCATGATAATTATTCACAGTTACTTATTCAATAACAAAATGAGCAATGTAAATA
CTAGATCAACCTAAAATAAACAAACAGTGTAGTGTTACAATGCACCTAAACACTCAGACC
AGAGTTAGATTGAGTCAAGGCCACCTCTTCATGAAATCTAATGCTGATGTAGTTCGTACT
GGCCCATCTTTGCTTCTGTCTATTTTTTCGACCTCATATCGACCTTTCCCCATTTCCCTA
GTGATGCGATATGGTCCATAAAATTTAGGTTTCAATTTTAGGGCGTTCCCAAATTGTGTC
CTTTGAATAGCTACAAGATCTCCAACCTTGTACATTTCTCCTACTTTACGTCGTTTATTA
TAAGTCTTTCTATTCTCCTCTTGCATTCTTAAAATTTGAGCTTTGGCTTCTCTTCGTGCT
TCTTCTCTCCTATTCATAAATTGCAATCTATTTTCTTCTTCTAAATATTCTAAAATTGAT
AAATCTTCTTTCAGTTTAAGTTTCACTCCTGTTAACAGTTCGAATGGCGTAGTACAGATT
GCCCGCTGGTATGTGCTGTTTATCACTTGTTGTAGTTTGCTTGTATATTTGTACCAGTGA
CCAGGTTCTTCAATACACATCTTTGTCAACGCAGAAATAATAATACTGTTCATGCGTTCT
ACTTGGCCATTTCCACGAGGTATTCCAGTAGTGATTGTAACATGTTCGATGTCTTCTTCT
TCACAATATTCTCGGAACTCACTGCCTGTGAATGCTGTACCTCGGTCAGTGATAATCCTC
CGTGGGTTGCCAAAATCCTTTTGATGTAATCTCAATTTTTCCACAGTTTCTTTTGCTGTT
ACAGTCTTGACTGGATAAATCCACACAAACTTTGTAAATCCATCAATTATAGTAAGTATG
TAGTTATACATTTTCTTAGTTGCATCTAAGGGTCCTAGGTGATCACAGTGAAGAGTATCC
AGTGGTAATTCTCCTTTTTCTATGGGATTTAACAAACCTTCCTTCTTTCCAGACTTCCTG
CTTGCTAATAGACATGGTACACATGTAGAAATTACTTTTTCAATTTTGCTATCTAATTTA
GTAATAAAGTAATCTTTCTCTATAATATCCCTTATCTTCTTTTTACCAAAGTGTCCTGTA
CAATGTGCTTTCTTAATAATTTCCATATCCAGTATCTTAGGTAACACCAACTTCTTTTCT
ATACCCTTGTAAATAACTCCATTCTCAAGGAAATAATCTTCATACTCATTTTCTTCTAAG
ATTTTTCTGATAACCTTCAAACTTTCGTCATCTGCTTGAGCCTTCTTCACTCTTGCATGT
AACTCGACATCAACAAAAAGTATGTTTCTGCTCAATGCATCAACATGCTGCATTCTATCT
CCCGTTCGATGTTCAATAGAAAAGTCAAAGTCTTGCAAGTATAGTATCCAACGAGCCACT
TTTGCAGATACATCCTTTTTATTCAGGGTCTTCTGAAAAGCTTCACAATCTGTCACAATC
TTAAAA
(2046 bp)

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