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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41061_c0_seq4
Scaffold_idBomo_Scaf318
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:4.94 TPM:3.90
ORF EntryO_BomoMG24183_complete:A_BomoMG_comp41061_c0_seq4
Sequence
(Nucleotide)
TTATATTTGATTTAATAATTTGTGGTGGTCCGTGTAGCGGGAGATACGGGGTTGTCCCGG
CGTGTTCCAGAATATATCCCAAATTAAACACTCCACCAACAGTTAATAGTTTGTATTTGG
TAAGAAGCACAAGCACAGGGAAGCAGAAAGAAGAAGTGGATAATTAATTATAAGTTCAAA
ATGATAAAATATATTTACTGGCGGTAGAACGATTGTTTACGATATTATAGCAGTGTCACA
TGCGTCGCAAGCGAAAGCGTGGTGCCGACTGGCGGGCGGGAGGTGACGTGACCGGCCGTC
GTACGAGTCGAGCTTTTTACGTTTTGTTTATGCACATTACACCGTACGATTTTTTTTGCA
TGTCTGCCACTGTGTGGAGGACGCCACACCACTCCCCTCCAGAGACCGTCCTACGGGCGA
TAATACATGGGTAATCGTACTGTTCTTCCGGAACGTGTTTTCTTAACAGGTCCTTCATTG
TCAGGTGTCTCCTTTTCAGGTATCTCCTTTTCAGCAGCCTTTTCGTCGTGATTCTTTTTC
ATCCGTGAATAAGGTAGAAATGACGTGTTTCTTCCAAGATCTGTGTTATCCATGAGCATA
TAGGCAGGTTTTAATCTTTCTATTGTTACAGAAACTGGTTTCCCTTTTATCAACAGCTTG
AATACCTTATCATTCCTTTCCAGTATTTCGTGAGGTCCGGTGTAAGCTGGTTGGAGGGCC
CCCTTCAAGGTGTCTTCTCTTAGGTAAACATGGGTTGTTGTAGCGAGATCCTTAAAAACA
AATGCTGTTTTCTTGCAGTGCCTAGATGCGGGTTGCGGTTGTATATCTTTCACTATCGAT
CGGAGTCTAGTCATAAAATCGGTAAGATCTTCTGTTTTGTTTTTGGATGAATGAAACAAT
TCCCCTGGTAATCGAAGCGTTTCTCCGTATATCAACTCAGCCGGACACGCTTGAATGTCT
TCTTTAAAGGTGTTTCGGATTCCAAGTAAGACAAGTGGTAGTGATTCTGTCCAATTTAAT
GTTGAGTGACATACTATAGCAGCCTTCAACTGCCTGTGAAATCTTTCAACCATGCCGTTG
CATGCAGGATGATAAGCCGTCGTTCGTTTGTGCTCGAACCCGACCATTTCAGCCAAATTC
TTAAATAGGACCGATTCGAATTGCCGTCCTCTGTCAGTGATAACGGCGGTAGGGCAACCA
AAGCGTGCTATCCATTCAGATATCAGGGCTTTAGCTACGGTTTCGGCGCTTATGTCCATG
ATCGGTATGGCTTCTGGCCATCTTGTAAATCGGTCAACGATGGTTAGGCAATACTTATAG
CCGTTCGATATTGGCATTGGACCTATTAGATCTATATGTATAGTGGTAAATCTGGCCCGT
GGTAATTGAAATGTTCCAGGAGTTGCGGTTACATGTCGGGTAATCTTGGAATGTTGACAG
GAATGACATGACCTCGTCCATTCACGGCAATCTATTCTCATACTGGGCCATACGTAGCGC
TGGGCTACTAACTTTGCAGTTGCTGCAGCGCCAGGGTGGCTTAGTGAATGCAAGTTATTG
AATACTTGACGTCGAAACGGTGTTGTGACGAATGGTCGTGGAAGTTGTTGGCTGTCATCG
CAAACGAGCTGTGTTTTTGTCCCAGGTATAGTTAGCTTACGAAAGGTCAGTGACATTGAT
CCCTCTTTTAGTAAACGTTTTAGCTCTGGATCGCTATCTTGTGATTTCGCTAACTGTATC
AGGTCGATGGGTTGTGCTACTTGTTCAATTCTCGATAAAGTATCTGCCACGACATTTTCT
TTCCCAGATATGTGACGTATATCTGTCGTAAACTGCGAAATATAGTCGAGGTGGCGGAAC
TGTCGAGGTGAGCACTTATCTTTCCTGGTAGCGAATGCGTAGCATATGGGCTTGTGATCC
GTGTATACGGTAAAATGTCGAGCTTCTAGCATGTGTCTGAAATGTTGGATTCCCTCATAG
ATCGCAAGTAGCTCCCTGTCGTAAGGAGAGTATTTTACTTGTGATGGACTGAGTTTCCGT
GAAAAAAACGCTAGAGGTTCCCAAGTATTATTCTTACATTGCTGAAGAGCAGCACCAATT
GCGGTATCTGAAGCATCTGTGACGATTGCCATTTTCGCATCTGCGTCAGGGTGTGCCAGT
AGTGTAGCGCGGCATAGGCTGTTTTTACATTCTTCAAATGCGTATAATGCGTCACCAGCG
ATGTTTACAGGGTGAGAACCTTTTATTTTGTCGGTTAGTAACATGTGAAGTGGCGCTTGA
ATTTTAGCTGCGTCAGGTATGAACTTCCGGTAGAAATTTAGCATTCCCAGAAAGCGGCGT
AGTTCTTTAGCAGTTTTTGGTACTGGGAATGCTCTGATTGCATCTACTTTTGTTTCCAAG
GGCTTGATTCCGGCAGATGAAACCTTGTAGCCTAGGAAAGTAACTTCTGACGCTCCAAAT
ACGCATTTCGATGTATTTATTACCATGCCATATTGTTTGAGCCTTTCAAATATTTGGCGT
AGGTGATTCCTGTGGGAAGATTCATCCCGGGAAAATATCAAAAAATCGTCCAAGAAAGCG
TAAGTGAAGTCCAAACCTCTTGTCATCTCGTCCACAAAGCGTTGGAACGTTTGGCCTGCG
TTTCTGAGTCCGAAAGTCATATACGGAAACTCGTATAGACCAAACGGGGTTGTTATTGCG
GTTTTTGCTATATCCTCGCTGTTTACTGGAATCTGATTGTAAGCTTTTACCAGGTCTATG
GTAGAGAAAACCTGGCATCCAGAAATATTGTGGGTGAAATCGTGAATGTTGCGTATGGGG
TAGCGATCAGGAATCGTTCTCGCATTCAACATCCTGTAATCACCGCATGGACGCCATCCG
CTGCTTTTCTTCGGTGCTAAGTGGAGAGGTGATGACCATGGACTCTCTGATGGTCTAGCA
GTTCCATTTTTCAGCATAGCTGCGAATTGTTCTTTGGCGATAAGCAGTTTATCCGGAGCT
AAGCGGCGTGGAGCACATGAAATTGGAGGTCCCGGCGTAGTCCGTATATGGTGGACTGTG
CCGTGATGGATGACACGGTCGGTCCCAGCAGGGCGCGTTATCTCAGGAAATTGACGCAGT
AATTGATGGTAAGCTGTTTCGCCGATCAATGTCTTCACAGAAGAAATAGTGTTCGACGAT
GAAACTGCAGCTGCTGGTGTCGTCAATGTCGTAGTGCTGTCGATTAGGCGATGATTACGG
CAATCGACGATGAGGCCGTAGAATGATAGAAAGTCGACTCCAATGATGGCTTTTGTGACG
TCTGCCACGATGAAACGCCATTGGTAGGCACGACGGAGGCCCAAGTTCAACTCTAGGTGA
GCGAAACCGTAGGTGGCTATGGCAGTTCCGTTTGCTGCGTAGAGTTTGTAGCTGGTGGGT
GATCGCCGTTCGCGTAGAGCGGTGCGGGGGAAGACGCAGAGATCGCTGCCAGTATCAACT
AAAAACTGCATCTTCGTTTTCCGATCAGAAACAAATAGGCGACCAGGTACATGTTGGCTA
TCGGACGTCGCCATTACCGACTGCCTTGGTAGTTTTCCGGCCGAAAATCACAAGGTTTTG
TGCACCATTTCGCTTGATTGCCAAATTTATAGTGGTACCAACATGTCGGAAACTTTTTAT
AGCTGGACTGTGACCGTTTCGTTTTTCTATCTGGACTGTCTCTTCTAGTCCTAGATCTGG
AGCGGTGTTTATGAGTCGTAAGTGCCTTCACTTGCCTTGAAAGTTCGTCGATCTGTTTGG
CCATCGACGCGAGCGACGGTTCTGTAGCCTTTAGTGCTGATGTTGTGGCTATTTGAGGCG
AACATGGTATTATTTCGTGCACACTGTCGGCTAGGTCTGCTAAAGCCAGTAAATCCAGTC
GTTTCTGAGATACAATGATCGGTTGAAGTGTAGTGGGCAAGCGGCTGGTCCAGATGGTTT
TTATAAATTCTTCTGGAACCGTTGGTCCTGCGAGTTGCTGCAAATGTCGGAGAAATTGCG
ACGGTCGTCGGTCCCCAAGCTCCTCATGCATAAGTAGCTGCTTTACTTCCTTTTCTCGTG
ATGTAGATAGACGCTTGATCAGTTCGCTTTTCAATCGTTCGTATTTCCCGGTTTTTGGAG
GTGAAACGATGATATCTTTCACTTCTGCGGCATATCTATGTTCCAGTGTTGAAGTGACAT
AATAAAATTTTGTATCGTCATCCTTAATACCGGACAGCACAAAATTGCCTTCTAGCTGTG
AGAACCAAACGGCTGGTTCTTCGGCCCAAAATGGTGGTGGTCGCACTCCGATACGATAAA
TGTCGGTCGTGTCGGATGGTGTAAAAGTCTTCGATGATCCATTGTTTGACTTCGATCCGC
CATCTTGATTGGCCATGACTAATGTAAATCGTCTTCTTACTGTTTTATGCTACTTATCTT
CTTGTTGTCGGGGTCACCAG
(4460 bp)

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