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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41046_c0_seq3
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		retrovirus-related_gag-pol_polyprotein_[Lasius_niger]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:4.87 TPM:3.85
ORF EntryO_BomoMG24010_internal:A_BomoMG_comp41046_c0_seq3
Sequence
(Nucleotide)
GGCTACGTTGTTAAAGCAGCTAGTATTAAAGAAAATGACTCCACAAGAAGATGTGAGAGA
CCATCTCAGAAATTTTATGGATGTAGTAGGTAAATTAGAAGACATGGATGTCAAAATTCA
TCCAGAGTTATTAAGTATAATGATGTTGTACAGTTTACCTACAAATTTCGATAGCTTCCG
AACGGCAATTGAGTCGAGAGATGTTCTACCAAGTCCTGACAGTTTAAAAATAAAAATCGT
TGAAGAATACGAAGCAAGAAGGCAAACCGAAGATAGTGAACCTCAGGCTTCAGAAGCTTT
CTACACAAAGACGAAGAAAAAGGTACAATTTTGTAAGGATTGCAATAAGAAAGGGCATTC
CACAGAAGCTTGTTGGTCAAAGAAGAAACCCAATAACCCCAATAAAACTAAAGGTCAAGA
AAAGACATTTAACATCTGTTTAACAACAGGAACATCGAAATGTAAAGGCAATTTATGGTA
TCTTGACAGTGGCTGTACGTCACATATGACGGGTGATAAAAGTATACTCCATAATTTAAT
CCCCGCGACTGACACTCTAAAGCTAGCTTCAGAAAAGCATACGACCGAAGTTAAAGGGAA
AGGAAAAGCCGAACTTTATACAAAGGATCGACGCTATAAAATTAGTCTTTCTGACACATT
ATATGTACCTGATTTATCGAATAATCTAATTTCTGCAAGCAAAATTACGGATCATGGCTA
TAAGGTTCTATTTGAAAAAGAACAAGCCAGTGTCATAAAAGGCGGAAAAACTGTATTAAA
AGCTAACAGAAGAAATGGATTATACTATCTTGAATTTGATAAACCGGAAGAGACAGCAAA
CTTCGCACCTAGTGATGAAAGCGAAATTATGAAATGGCACAAGAAATTAGGTCACATCAA
TGAAAGAGACCTAAAAGAAATGGTTAAAAATAAAATGATGCGAGGACTCGACTTTAAAGA
AAAAACTTTGGGTACCTGTGAGACTTGTATCAAAGGAAAATTTTCCACTCTACCATTCCA
AAGCCATGGACAAATAATCTCTACCGAAGTGCTCCAGATAATTCACAGTGACGTGTGTGG
CCCATTTGAGAACGAATCAATGGCCGGATCAAAGTATTTCGTAACATTTATTGACGATTA
TACAAGATACTGCTGTGTATATTTCTTAAAAGAAAAGAGCGAAGTAATCGATAAATTCAA
GGAATATAAAAACTTTGTTGAACTGTTTCATAAGAAGAAAATTCAAAATCTACAAACTGA
TAATGGAGGCGAATACAGGTCTAAAGCGTTTGATAAATTCCTCAAAGATAACGGTATAAG
CCGAAGACTATCTGCACCTTATACCCCCCAGCAAAACGGCATGAGTGAAAGAAAAAATCG
(1380 bp)

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