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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41046_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Trichinella_murrelli]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:11.41 TPM:9.02
ORF EntryO_BomoMG24007_5prime_partial:A_BomoMG_comp41046_c0_seq1
Sequence
(Nucleotide)
TACTAGCTGCTTTAACAACGTAGCCTTTCTTGCCGGCCCTGAACTTTGGTGAATAGACTT
AAGTTTGTCCCATACCTCCTTGGATGTATTACACCCTTTAACTTGTTTCAGTTCTGGTGG
AGATATAAGTAAAATTAGCTCTGACCTTGCCTTTAAGTCTTCCTTTATGAACGCACTCTT
TTCTTCGGCAGTCGTAGTTGCCGCTAACGCTTTTGCACCACTAGCGTATTCCCATAAATC
GTATCTTACGAGAATCGCCTGTGCTTGTAAGCACCAGGTATCATAGTTTGATTTTGTCAG
CGATTCTATGTTTCTGATACTCGAGCTCATTTTAAATTTTTTTATTTTCTCATTTACTTA
CTATTTTAAATTTTAATATGCTTCTTCCATTTGCCACTAGATATTTATCGCAACCACGCT
CTGCTACCACTGATAGGGTGGACTAGCGGCCATAGCAATTAAAACGTAAATTAAATACTT
GAAAACATTGTGTTGTATATGAGAAAATATAATTCAGAATGACACCGCACATCAAAAGTA
AAAAGAACATATTACAAATTCAAATATAGTGCATCATAGACAATTATACGTGGACAGCAT
CACGACCTTCCAACACCTTCTCCTGATGTTCACTCATGTTGCCGAGACACGTTTCTATAC
ATGCATTAATCTTGCACAGTGTCTTTCAAATTTTACTTTTGACAATGGTTTTGTCATTAC
GTCAGCTAACTGAATTTCTGTGGGACAGTAGCTAATATTTATTAATCCATGCACGAAGTG
TTCATGTATAAAATGGTACCGCACGTCTATGTGCTTAGACCTTTTGTTGAAGGATCCAGA
CTTCACAAGTTGAATCGAACTTTGGTTATCAACATGTAGATTTATTTTTATGTCCATACC
GGTTATTTCCTGTAATAGAGATTTGAGATACAATGCCTCTTTGCAACAGTCGGCTGCGGC
TATGTACTCGGCTTCGGTCGACGATAGCGCTACTATAGGCTGCCTCTTGGATGCCCATGA
TATTGGTCCATCGGCTATCATTAGCACGGAACCAGAAGTGCTTCTTCGCGTCAATGGGTC
TCCAGCATAATCCGAGTCGCTGTAAGCATCGATGCTCTCTATCGGTTTGTTTCGTTTGAA
TAAAATGCCTTTATGTTTGGTTCCCACTAAATATTTGAATATTTTCTTCAATTTTGTAAC
GTCTTCTCTAGTGGGGTTTTCGACCTTCCTGCTAACTAGATTGACCGCTTGTGCGATATC
TGGTCTGGTTCTGGTAGACAGGTACAGTAAACTTCCCACTGCTTCCCTATAGGGATATTC
CTTCTCCTGGGCAGTTTCCTGTATCGACTTTGAATCGCTACTTGCGGGCGTGTCACAAGG
TTTGGCATTTTTCATGTTGTATTTTTCCAGTACGTCATTTATGTAGGATCTCTGAGTAAG
AATGATTCCTTCTTTTGAGTTTTTTATTTCCATACCCAGATAAGTACTTGGATTTTCATT
CTTTTTCATTTGAAATTTGGTTTCAAGTTTCTTCAAAATAGCTTCGATCTTTTTCTTATC
TTTTCCTATGACAAGTCCATCATCAACGAATAGTCCGATTATTATTGATTTATCTTCGTT
TATGAAAACGCATCGATCTGTTTTGATTGTCTTGAATCCCAAATCAAACATCGCTTGGGT
AAAAGTTTTGTTCCATGTAAATGGAGCTTGTTTTAATCCGTACAAAGATTTTTTTAATCG
GCAAACTACTTCAGTAGTATTGCAGTTAGTCTCATAGCCAACAGGCAATTTCATATAAAC
TTCATCTGATAACTCTCCGTATAAGAAAGCTGTCTTGATGTCAAATGTCATGAAGTAGTA
AGATTTAGATGCGGCAATTGCTAATAAAGTTTTTAATGCAGATTGACTTACTACTGGGCT
ATAAATGTCTTCGAAATCCAGGTTTCCTTTCTGCTCGCATCCACGTACGACTAATCTAGC
CTTGTACGTACCGTCATCTTTAATCCGAAATACCCATTTGTTCGACAGTATTTTTGTCCT
TTGGCTTCTGACTTGTCTACTAATACCCAGGTGTTATTTTTCTGTAATGATTCCATTTCA
GATTGTATCGCCTTCTCCCAATTTCGTCTGTCGGTGCCAGTCACAGCTTCTTTGTATGTT
AGTAAAGAGCAGTCATAGTCGTCATTATTTTCTGACGTAAACATGGTCACGCAGCGACTT
AACTCATAATCTTTGGTCCATGCTGGTGGTCTCACGTCCCTTTGTGGTCTTCCACTTGAG
GGAGATGGTTCATCAACATGATCTTGACTAGAGCTGGAATAAAGGGGGTTAGGTTCCTGA
AAAGGTAAGTTCTCATTAATGTTGTTTCTTTTTTCTGGAATTTCAATTTGTTCTGTTTCA
GGTTCTGGAGTAAGACCTTCGCGTTTCTCAGCAGGAGTACCGCTATAATGCATCTTTTCG
ACTACTTTTACATCTCTGCTGATAACAACATCATTCCTTTCGGGTATATATATTCTAAAA
CCTTTTGTATATTCCGCATATCCCAAGAATACTCCTTCTGTCGCTTTGGCTGTGAATTTT
CCTCTTCGGTTTTTGTTCATCACAAACGCTCTATTTCCGAATACGTGTAGGTGATTTCCT
GATGGTGTTCGTTGTACCCATTTCTCATATGGGGAATTGCCTTTGAGAGCTCTTGCTGGG
CTTCTATTTATTAAATAGTTTGCAGTGTTTACTGCTTCTGCCCAAAGTTTTGCAGGAATA
TTGGCATCTATCATCAGACATCTAGCTTTATCCATCAGCGACCGATTTTTTCTTTCACTC
ATGCCGT
(2827 bp)

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