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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41045_c0_seq5
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_argonaute_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004521 F endoribonuclease activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007279 P pole cell formation
GO:0007349 P cellularization
GO:0007367 P segment polarity determination
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0010526 P negative regulation of transposition, RNA-mediated
GO:0016032 P viral process
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0033227 P dsRNA transport
GO:0035071 P salivary gland cell autophagic cell death
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035190 P syncytial nuclear migration
GO:0035195 P gene silencing by miRNA
GO:0035197 F siRNA binding
GO:0045071 P negative regulation of viral genome replication
GO:0046872 F metal ion binding
GO:0048102 P autophagic cell death
GO:0051607 P defense response to virus
GO:0070578 C RISC-loading complex
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:0098586 P cellular response to virus
Transcript
Level		FPKM:59.08 TPM:46.67
ORF EntryO_BomoMG23999_complete:A_BomoMG_comp41045_c0_seq5
Sequence
(Nucleotide)
TTTTTATGTAGATCCCTATATACTATATACCTAGTACCTACTCATTCACAATAACATATT
CGATCAATTAAATTTCGCGATAGCTTTATTGCTGAAGTACACAATTGCACACCTTCATAA
AGATTTGTACGAAGAGATCATTACCACTTTGTAATCATGGCTAGAGGAAAAAACAAAGGT
GGTAAGAAAGAGGCACCTGATTCTACGAAAACCCCTTCTTCTGAAAGTCAGCCTTCAGAA
AGTCAACCTTCAACATCCCAAATTCCAACTACAGAACCAACAACTACTATTGAAGATGAT
TTAGGGGGCCTTGGTCTTGGTGAATCTAGAAAAAGACGGCCCAGGAAGAAGCCAACTGAA
AAACAAGAATCATTAGCTCAAGCTGAATTGTCAAACCCAAAGCTTACTCAAACTGATAAT
CCGAAAGCTGAGGTTCCTAAAACAGAGGCTCCTAAAACCGAGGCTCTTAAACCTGAGGCT
CCTATCCCTGAGGCTTGTAAATCTGAAGCTCCTAAAAGTGAAGAGTCCAAAATCGAAACT
AGAGGTTCTAAACCAGAAGCTGCTGCTGATAAGCCTCAAGATGATGATGATGGTTTGGGT
TTGGGGTTAGGTGGTGGGGGACGAAAAAAAACTCGCAGCAGGAAACCTAAATTTACAGCT
GTAGAAACAGACATCAAATATTCAAAAGCTCCATCAAGTGAACCTGCAATTCCAGGACCA
TCACAAAGTAAACCAATAACGTCAACTGCATCACAGCCTATTCAATATGTACAAAATAAA
CCAGAGGTCAAAGTGGCCCCTGCAGCCCCTGTTTTGTACAAGATACCAGATAAAATATTG
TCTCCACCCTCAAGAACTGTGCCGATTTTAACTAATTATTTGGCTATGAAAATAACAAAA
CCATTGAAAATTTACCGTTACGACGTCACATTCAAACCAGATAAACCGAAGAAATTTATT
GCACAAGTGTTTAAACTGGTAAAGTCTAAAGAATTTCCTAAAGAAATCCTTGCCTTTGAT
CAAACAAAAAATTGTTATTCACTGACTCCGCTGCCAAAAATCACCACTGAGAGATATGGT
GTAAAAGTGGTGATCAAAGATATGAACGGTAAAGACATGCCGTTTGAAGTGTCATTCAAA
GCTAGTGGTATAGTAGACTACAATAATGTTCTGAAGCATATGGCAACGGGTGGATCATCC
CTTAATGCACCAACTGACACCATACAATGTATTGACATAGTGTTAAAACAAGGAACATTG
GAATCATATGTGAAAGCAGACAGACAATACTTCATGCGTCCTGCATCTCCGATTGACTTG
GGCGACGGGCTCGAGATGTGGACTGGTTTATTCCAATCTGCTATATTTACATCGAAAGCC
TTCATCAACGTTGATGTTGCACACAAAGGTTTCCCAAAGAATCAACCTATGATTGATGCT
TTCACGCGTGATTTTCGCTTGGACCCCAACCGTCCAATGGATCGGCAACCAGGTCGTGCT
GTTGAAGCTTTCAATGAATTCATTAGAGGGCTTAAGGTCGTATCGAAGATACTTGGTACC
GGACCTTCTTCGGGACAATTACGCGAGCACATATGCAACGGGGTTGTCGACCCACCGTCA
CGTCAAACATTTACGTTGGAGAACGACAAAGGACCGCCGGTTAGGATGACCGTATACGAA
TATTTTATGAAAGAGAAAAAATACAGGATTAAGTATCCGGACTTGAACTGTTTGTGGGTC
GGCCCGAAAGACAAGAACATATATCTACCGATGGAACTAGTCGAAGTTGCATATGGCCAG
GCCCGTAACAAGCAATTAAATGACAGACAATTGTCGACAATGGTGAGAGAGGCTGCAACC
CCACCTGATGTACGGAAACGTAAGATTGAGGAAGTGATTCAGAAGATGAATTACTCGAAG
AATCAATTCTTCAAAACATACGGTTTGGAGATAGCCAATGAGTTTTATCAAGTTGAAGCG
AAAATTCTCGAAGCGCCCACATTAGAAGTGGGTCCACGGCAATTTACTGTACCAAAGAAG
GGAGTATGGCAGGCCAACTGTCTTCTGAAACCGGAAGCTCTGAATTCATGGGGCTTCATT
GCCATAGAATTGGATCCACGTGGATGTAATTATGAAGACATCGTGTCGAAGCTAATGAAT
ACCGGTCGACAAATGGGCATGAACGTGACCCAACCAAAGATGGCTTGCTTCAACATCCGT
ATAAATGACCTGCACAAGAGTATGCTGCACGCTCTAGAAAAACAGGTCAATTTCCTGGTC
GTGGTCGTTTCTGGACGGGGCCGCGATTATTATCACAAGCTGAAACAGATTGCCGAACTC
AAAGTGGGTATACTGACGCAGTGTATCAAAGAAGATACCGCCACGCGCCGAATGAACCCA
CAAACAGCTCGGAACATTTTACTAAAGGTGAATTCGAAGCTTATGGGAATAAATCAGGCA
TTGGAGAATCGTTCCATTCCTCAGTGCTTAAAGGGTGGGGCTGTGATGATCGTGGGCGCT
GACGTCACGCATCCATCGCCAGATCAGAGTAATATACCGAGTATCGCCGCCGTAACCGCC
TCGATGGATACGAAATGCTACATATACAACATCGAACTGAGTATACAGACACCGAAGAAA
GAGATGATCGTTCAGTTTGAGGACATAATGGTGGATCATTTCCATGCTTTCAAGAAAAGT
CAGGGGATTCTGCCGAAGAAGGTGTTCGTGTTCCGTGACGGGGTTTCTGAGGGTCAATTT
GCTGAGGTAATGAAGAGTGAACTGACTGGATTGCATCGCGCCTACCAACGTGTCGCGGGA
TTGAACGCTAAACCAGAAGTATTGTTCATTCTTGTACAAAAACGTCATCACACGAGATTC
TTCCTGCCCGGGAACAACGCCCGTTTCAACGTCGATCCGGGGACTGTGGTCGACCGTGAT
ATAGTACATCCACGTGAATTGGACTTCTATTTGGTGTCTCACCAAGCGATCAAGGGCACG
GCTCGTCCGACGCGCTACCACGCCGTCTGCAACGACGGCAGGATCCCGGAGAACGAAGTG
GAGCACCTCGCGTACTACCTGTGCCATCTGTACGCGCGTTGTATGCGCGCCGTGTCATAC
CCCGCGCCGACCTACTACGCGCACTTGGCCTGTCTGCGGGCTCGCTCGCTCACCTATGGC
GAGATATTCAATAATAACGATCTCGAGAAGAATCCCAAACGTCTCCGGGTCCTCGACAGC
ATGCTGAAACAGAGCCGTATGTTCTTCGTCTAACAAGATGATATTTTAAAAATGTATATG
TAATCACTATTTAATAAAACACGTATAACAACGAATGACTTCATTCGTAATCTTATTATA
TTAATATCAATAACCATGCCTTTTGCAATGAAAATTATAAACACGTCTCTTACCCTATAA
ATATGATTGTTTCATGACAGAAATTAGATAGCTTTTTGTGTAAAATCAAGATTTTTTTAA
TGAAAATATAAAACGTATGATTTTTTTAAGGAAAACTTCTTTGAGTTAATGAAAAATTTA
AAAACTAATGTTCTTTGTACCGAGTTAATCCGGTAGGTTTCGCTCGCACAAAATACAGAA
GATAAACCAAAGAAGTTTCACTTCTTAGTTTTACAGATTTGCATGTGAGACTCAAATAGC
CTCAAGCGCTTTTTAGATCGCGGTTGTCATGTAAAAACCATAATATATTGTATCTCGACA
TCGGAGGTATAAACTCTGATATAAATTGTTTCATCTGTACAAATTGAGTGACTTAAATTA
TAATTGGTCCAGGATAAGATGTCCGAGTTTGGTTAAGACCCTACACCATCATCATATTCT
CAAATAATATGATATGGTGTTGTTTTGCGGAGTATATATTGTTTACTCTTGCGCTAGGAT
TCGTTTTATCAGGTTCTGATGCTTTGACACGCATTTATTCGTCTGAAGTCGAGATGTTAC
TGCTTATTTGCATCTGCTTTTACTGGTGGTAGGACTTCTTGTGAGTCCGTGCGGGTAGGT
ACCACCGCCCTGCC
(4034 bp)

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