SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41030_c3_seq13
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_cell_division_cycle_5-like_protein_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
GO:0071987 F WD40-repeat domain binding
GO:0072422 P DNA damage checkpoint signaling
Transcript
Level		FPKM:14.15 TPM:11.18
ORF EntryO_BomoMG23926_5prime_partial:A_BomoMG_comp41030_c3_seq13
Sequence
(Nucleotide)
CTCTCCTCTTTCTCAGAATGTCGCAAGGATAAGCAAAAATTGAAACAACGCAAGGAAAAT
GATGTGCCACAAGCCATGCTACAAGGTGATGCTCCGGCAAGAAAACGCAGCAAACTTGTG
CTGCCAGAGCCACAAGTTACTGATCAAGAGCTGCAGCAGGTGGTAAAGTTGGGGCGTGCT
TCGGAGGCGGCTCGCGAAGCCGCGTCGGGCGGTGCGGCGGCCGCTACCGACGCTTTGGTC
GCGCAGTACGCGCTCACACCTGCGCCCGCCACTGCTCTGCGCACGCCCGCACAACATGAC
AGAATTCTAATGGAAGCACAGAATGTAATGGCACTAACTCATGTGGACACCCCATTGAAA
GGAGGCTTGAACACTCCATTACATGAGAGTGATTTTTCTGGGGCACTACCTCAAAATCAA
GTTGTGGCCACACCTAACACTGTTCTGGCTACACCATTCAGATCATCTCGCAGTGAAGTG
TCCACACCTGGCAGTTTTAACACTCCAGGACATGGCAATAGTCAGCTTGGGCTGACCCCA
GGCTTGCGAGATAAACTTAACATCAACCCTGAAGACAGAGTGAATGGTGGTGACACTCCT
CAAATTTCCCATCAACTTCAAAAACAAGCAAAAACATCAGTCAGAAACGCTTTGCAATCT
CTGCCTGTTCCGAGAAATGACTACGAAATCGTGGTGCCAGAGCAAGAGGCTGGTGAAGAT
AAGGACGATTCGGCCGCAGTCGTTTCCGTGGAGGACCAAGCTGATGCTGATGCTAGATAT
GCTAAGGAACAAGAAGAAAAACGCGCGGCCGAGTTGTCGCGTCGCTCGCTGGCGGTGCAG
CGCGGCGCGGCGCGTCCCGCCGACGTCAACGTGTCGGTGCTGCGCGGTGCCGCCTCGCTG
TCCGCCCTCACGCCGCTGCAGCACGCCGAGGAACTGCTCAAAGCCGAGATGGTCACCATG
CTGCACTACGATGCCCTCAGGGACCCGCCTGAAGGTGTAGATAAAAAGCGTGCTATTCAA
CTACAAGCATCCCATTTAGCATACTTAGAACAGCATCCATATGAAGAGTTTGCTGACGAA
GAATTAGCTGCCGCTAAAGAAGCACTGAAGAAAGAAATGGAAGTCGTGAAAGCGGGCATG
AGTCATGGGGACCTTAGTATAGACGCGTACACTCAAGTCTGGGAGGAATGTTTAGCACAG
GTACTTTTTCTACCCGGTCAACATCGTTACACGCGTGCTAATTTGGCAAGCAAGAAGGAT
CGTTTAGAATCTGCAGAGAAAAGATTAGAGCAGAATAGAAATCACATGGCGAAGGAAGCA
AAAAAATGTTCAAAAATGGAAAAGAAACTTCGTGTGCTAACAGGAGGTTACCAGAGTCGT
GCCGCAGCTCTAATAAAACAGTTTCAAGAATTACAAGATCAAATAGAACAAGCTAATTTA
GAATTATCGACCTTTAAATTCTTGGCTGAACAGGAGAAAGCGGCCATTCCACGTAGAATA
GAATCGTTGACCGAAGACGTCAGCCGACAGACTGAACGCGAGAAGCTTTTACAAAAGCGA
TACTCGGAACTACAGGCCGAGGTAGAAAACATGCAGAAAGGGAAGAAAAGTCAAGTTTCC
GAAAATGTTAATTCTCAAAAAACGACTGCATAAAAATGTTCTTGTAAATATTAAAATGGT
GTAATGAAATGACGCACTAAGTTAAGGAAGATATTATCGTTTGTCCGCAAAATTGTTTCT
CATACATTTAAAGCTGCAGTTAAAAGTTTTACCTCTGTATCGACGTAGCTGATATTTAGT
GCTGATGAATTACTAGTAAAAACTAAACAGTGGATCAAGACTATCTGTAGTATAGTAAAT
GAGAACGGTTCTATTAGAAGATGAGTAACATTAATAAACACTGGAATAATAGGTAGTAGA
ATTATAACAAAAATATGTAATAAATATCAGGTTTCCATTAAATATAGTTTTTCAAACCCA
TTTTTAATGGTTCGACAAAACATGTTTAACAGTGTGCGTGTTTATTTTCACATTTCATTA
GTCACATTATAATTTAAAAAAAAAAACAACGATTATATCTACACAATAAGGTCAGAATAA
ATCATAAATAAGTAGTATTTTTTGTTTCATTGTAGTTAAATCCAATTGAATGTTAAAGAT
TTAGTTTATATACCAATATATAGTGGATATAAGAACTCCATACTTTAGATTATTGACATT
GCGGAAATTTACCAACATCAATCTTCTTTCGATGGTAAGGTATATTTTTTGCGAGGTTAC
TCTGTAGTTTTAGTATGGAAGAAAAAACTGGTCATATTTATCTTTACATGTATGTATTAC
AAATATACTATTATTTACAAATGACATAATTCGTAGTACAATATATCTCGATTATAATTG
ATATTTACAGTTAGATTGATAATTTATATCACAGAACCAAATGTATATACGAATCTATGA
ATACAAAGATCATCAATTAACAAATCAAATTTAAATTTAACATTCAATGACTGTGTTCTA
GTAGGCCATAATATCATTGTTGGCTTGGTTACAAGTGTACGGCACTATCCATCAAGATTG
GAAACTCTTGAAATGCAAGAAACCATAAATATGTAACACACAAAATTGCTCTAGTCTAGA
AGAACATTCAGCATGTCTCTTAAATAGTTACAGCAATTCGTTGTTGCTAAGTTGTTGTTA
AAACTTAAAAAAAAACAGACGAATTGAGAACCTCCTCCTTTTTTGAAGTCGGTTAAAAAG
AAAAAGACTACTAACAAGTTATTTTGATGGTTCTTTCTCAAATTCATATTCTAAAATTCC
ATATTATAATCTATTATTAACATACGTCAGCTGCTGTCATCCGAATCGCTTTGTATTGAC
CTCTTACAATTTTTGTTACTTCGCTTCACAAGAGGACTGTCACCAGCTTCTGGAGACTGT
GGCTCCTGTATTCTACTTTTTTTCTTCTTTTTTCTCCGTTTTTCTAAAACCATTTCCGCG
ACTTCAAGTGCAGAAACTTCATTGACTTGAGTAAGTCCAATATGAGAGTCTACACAGAAA
CTATCCATTTCGTATGAATCTTCTTCAACAAATTGCGATAAAATATCTTCCTTCAGTCTT
CTAGGTAACTCCGGTATCTTGAAGCCACCCTGTTTTAGGGGACTCTTTGTTGTTTTGAGG
TAAAGTGCCTGCACATCCTCGTGTTGCGTTACGTTGTCGTCACATATGAAGTCGATGATA
CTACCGACGCTTTCGTCTGACAGTTCATCACCACTGTCGCGATCATCTTCATCAGACAGT
TCCGCTTCCAGATCCAAGTAAGAGTTACATTTCTTTTTTTTTTTTTTAATTTTGATTGTT
TTGAGCGAACAGTTTCGCGCGGGACTGTCGGCAAATTTATTTTTATCATCTAAGATGAAA
TCGTCATCGCTATCGTCTAAAGCAATTTTGCGTTTTTGCGGTGATTGTAATTTCTCAGGG
CTTCTATTATTAAATATTGTACTAAACTTATTCATTAAGCTTTGTTGCAGCTTATTTGGA
TCGCGTCGATAGTTTTGTAGGAACTCCAAATTTCCTTTAACATCTTTCTCGGTAGCGCTT
GTAGTTTTCGCGAATTGAGAAGCAAATTGTGGATTTCTATTTTCCTTTTGCGACAAGACG
TTGCTTTGGGAAACGGAGCAATGGAAGTTATCGAACTTTTGTTTAACCTTGAACGAACTA
ACGGAAGCCAAAATCTTTTCTTTTAATGTTCTCTGTTTGTCGGGGCTCTTTGTTAACTTT
GGTTTTTTATTAAAATACGGAGAAGCTATCTCGTCATCGTCCATTTCTAATTTACGTTTA
GAGTCAATTTGTACAGAGAATTTATCTTGCATTAAACTAGAAACTTTGTCGGAATGAGAA
ATCGAGCCGCCACTTTCACTATTATTTTCACGTTCGCTTTTGCCAAATACATCAGCCGCA
TCATAGATGACTGTGTCCTTGGAATCGCTGTCACTATCTGAAATTATTATACTGGACTTT
TGTGAAAGATCTCTGGAAAAAGAGTTTCTATTAGATTTCGCCAAATCGGTTAACTTCTTG
CGTTCAGTCTGTGATGGTAGAATAGGAGAAACGCATAAATTATCCTCATTGTCGTTTATA
TCAGTTTTTGAATGTGTAGCTACCGATGCAAGTGCTTTCTCGTCTTTTGTTTTGTTAATT
AATTCAAGTACTTGTGTTATTGTAAACATACTATCTTCGGTTGTGTTTGATGTATTTTTA
TTTTTAGAACTTGCATTGTTGTCTATTTTATCAAATAATAGACTCTTTTTAGCGATCGGT
GTAGAGTTCCGATGTATCTCTTTCTTGGTGCTCAGCTCGAATTTGCGTTTTTGAGAACAG
AGTATAGGCGACGTCACCTGTTCTTTAACTTTAACTCTTCCAGATAAAATAGATGGACTT
AACGGATTTTCATCTGGCATTGGTTTGTGAGTTTCTGTTGTGGAACGAACGTTTAGGAAT
GTCACATCATCAGTTTTATCTGCCTCGATATCTTTCATCTCTGGTTCGTCGCATTTCTTA
TCGAAACTATCTTCGTAATCGGCAAATATATCTTCAACGCTGTCGAGACCGAAGAAACTC
AGTACCTTCTTCTCATTTTCTTGGGGTTTATCAGTTTTTTCAGCTTCAAAATTGTCCAAA
GGACTACTGTTGGCAAATATATCATGAAGTTCTCCTATATCAAAATTGTTCTCTCTATTC
ACCTCATCTTTTTCAAATTCATTGTCATTCGATTTCTCACTAAAGATCTGTGAGTCGAAT
TCCAAGTCTAAATCAAAGTTAGCTGAAACATTTTTTTCAGCTAAATCTGTTTTGTTGACG
TCAGGTGAAGCTCGATCCTCGACAGCCCTATTCCGGTATTCACTAATAGACTTCGAAGAA
ATGTAATCGATTAGATCTACATCAGGTAAATTTATTTCATTCAAATTGATCAAAAGACCG
GAAGTTTGTTTTTTGTCTGATACGCCATTGAAAATTTTACATTCGCACAAGTTTTCACAG
ATATAACATTTGTTCTCAGATTTCGAGTTATTTAAGTTCAAATCCACAAGAAGGTCGACG
AAGGCAACGGGTGCTGTGTTATCATTTTGGAGGCCTAAATCGTTGATTAATTTCGTGTAG
CTTTTGGTCGACTTGGTCGCCGTGCTGAACAAAGCCCTGATGTCTCCGTTCTTTTTCCCG
GGCGAGTGCGTTATCTTTTGTCTCTTTCTTGCCTGTTTCGATTTAACCGGAGAGGGCTTT
TGCAATTTTGTGAGGAATTCTTGTGAAGCGAGACTGTTCTGTGAATTTTTCAATTCGTTT
TTTTTCGTTTTACTGAACTGAAGTAGTTCGGTCAGAAGAACTGTGTCCTCCGAATGTTCA
ACGTTCACAGTGTC
(5414 bp)

- SilkBase 1999-2023 -