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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41014_c4_seq9
Scaffold_idBomo_Scaf600
NCBI non-redundant
(nr)		S33901_reverse_transcriptase_-_silkworm_transposon_Pao
Ontology
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.89 TPM:3.07
ORF EntryO_BomoMG23648_3prime_partial:A_BomoMG_comp41014_c4_seq9
Sequence
(Nucleotide)
TTCTTTCCACACCGCGGGAAAGATGCAGTGCGTCATAGCGGCATTTAAAATTGTAGCCAA
CATTGCTATCAGTTGGACTGGCAAGAGTTTAAGCGCGCGGTTGTGGATGCCGTCGGAGCC
GGGTGCCTTCCTAGGTTGTAGGTTGTGGATCGCGTCTCTAACTTCGTCGGTGGTAATGGG
GGGTAACGCGTCCGAGGGCGGCAGGGAAGCTCTGCGCTCGACCTCCCTGTCGACTAACTC
GGTGTGTTCGGGGTCCGCGTGTTGAGTGCTGGTGGTGCACTGCTCTTGCAGTGCATCGGC
CAGCAACTCTGCCTTGTCATCGTCATCGTAAGCCGGTGATTGGCCTGAGGGGCGTACGAG
AGGCGGCATAGTGGCTATAGTTTCGGACTTGAGGGTCCTAGCTAGTTGCCAGTATGCTTG
GTGAGTGGGCGCGAGTTCTTCTAAATAACTATCCCAGTTTTCGTTTCGGGCGTCGCTTAA
GCGGGATTTGACCTCCCGCTGTAAGCGACGCATCCGAGTCTACATTCCGACATTGCCTCG
ATGGAGCGTAAGCGCAGAGTTACGTTCCTCAGCAGTGCCAGGTCTATAGTGCTCGGACGG
AGCGCGATGTTATACGGATAACATGTTGGAGTTGGGGGACCGACTACTTCAAAGGTAAGG
TCGTCTATAAACGCGTCGAGACGCCTACCATTTATGTTTGAACTGTGGCAGTTCCACCTA
GTGTGGTGGCAATTTAAATCGCCTGCCAGGATGACGGAGTCTCCCATGCCGAACAGTGAC
TCGATGTCACTGCTCAGAAGGGGCTTGTCCGGGGGGAGATAAACGGATGCGATGACGATC
GGCTGGTGTCCCGTCAGCGAGATACGGCACACTGACGCCTCGATATGTGAGAGCGAGGGA
GTATCGAGAGGGACAACGTGCAGGGCCCGCCTATAGTAAATGGCAGTCCCGCCTTTGGAG
GCGGTGAGTCTGTCATTCCTAACCATGACGTAATTCGCGACTTTCGGGTCGCGACGCGAG
GGCTTCAGACAGGTTTCCTGCACTAATAGAATATCTACAAGATTATCGCGGAGGAATTCG
AAAATTTGATCGCGTTGCCGCGCGAGTCCGTTAGCATTGTAGAATGCTAACGTAAGGGAA
TACGGTTTTTCTCTACCTTTTTGCGCCATTGATTACCGGTAAAGATTTTATAACGTACGC
GACACGGACTCATAAACGTCCATGTGATCGAACGCGGCCGCGAGCCGCTGTTCGGGGGTT
GTCGACCTACGGATAGCGTCAGCGAACGATCGCAGACGGTCGAAGTTCACCGCGGTGACG
AAGTCGCGCACGAGCGCGAAGTCGTTGGCGGCAGAGGGTTGCGGGGGACGGAACGCGGGC
GCGGGGCGAGGTGCGAGCAGGGGCTGAGGCGCGGGGCGTGTCGCGAGCGGGGGCGGGGGT
GCGGTTTGTGTTCCCGCCTTCGTATACGGCAGCGGCTTTTTCCACGCTGAAACCGTGGGA
ACTGCAGCCGGCACGAAGGCAGGTTTCGGCACTGAGGGTGCCGAAGTCTTTGGGCCGACG
GTTCGCGGAGCTGGGAGGGTTGAACGCTTGCGCGGAGCCCTAGGACATCCACGGTAGTTC
GCGGGGTGCCCTTGCTTAAGGCATAGGACACAGCTTGGGGGTTCGGTCGCGGTTTCCCTA
ACACGCGAGCAATCTAGTGTGGCGTGGTCGCCGAGGCACTTTACGCAGCGGGGGCGCGCG
TGGCAATTACGAGCCGAGTGGCCGTAAAGCTGACATCTGTAGCACTGCCCGGGAGTGCCA
CGCTTGTGGGGGGCTTCGATTGAGATCCCGGATAGGCCGCAAATTGTCGTGAGACATGCG
ATCTTCTTTTTGGCCTCCGGGGTGGGTTCTAACGCCACGAGTATCATATTATAGGGCTGT
TTGCCCCGCCCGCTGTGCATCCGGTGCACACTAACTATCGGGAGGGCCTGAGCGGTCAGA
TCCTCCTTTATGTAGTCGATGTCGAGTTCTTTAGGGACTCCGCGTATCACTACGCGGAGC
TCGCGGTCCTCCTGAAGAGCATAGGTGTGGAAACCTATGTTCTCCTTTCGGAGGTATGCT
GAGAGGGCCCTATGGTCGCCCGGCGTTGCGACCTTTATCTGAATCCCATGCGCGACGTTA
CGCGCATGGGTATAATTAATTTTATTTGCCTGAAGGGCCTGGGAAACGCGGTTCCACGCA
GTTTTTTCCTGGAGAATCAGCGGGGGTGGGGCAGCTGCTTTAGGAGCGGGCGCGGGCTTG
GGACGCGGCGGCGGGGTTATGCGGCGAGCGGAGTCCGACTCCGGTGTCACGACTACCTGC
GGGCGGGAGGCGGTCGCGGATTTTGTCTGCTTCGTCGTGGAGCTCCGGGACTCCACGGCG
CGAGTACGCTTTTTACCGCGCGTTACGGTTTGGAACCCATCCGAAGTTCCAGGCTGAGGG
CTTGACGCGGATTCGAAATCCATCTCCGATTCGGTATCGGAGCCTGAACTTGAAACGATC
GAGGTCGCGGCGGACGTAGCGCGTGATGACGTAACCGACGCGGGCGCGGGGGTGGGGGTA
GCGCTAGGCGCTTCGTGAGTCGCATCGTGGGAACGTGCGCTCGAACTTGACGCGGCGGCG
GGGGGTGCGCGGCGTGCCTCCGAGGCACGTTTGAAATACGCGGCGACGGACGCGGGGGGG
GATGGATTGCCACGAGAGGCCCTATATGCCAGATATTCGGCCCTAATTGTCGGGTACCTT
TCCCGGAGGAACCCGACAAAATTGCCTATAAATGGCCATCCTTTTATATTTATTTCAGTA
CCCCATCTCGCGACACGCTATCGATGCGCCACTTTCGGGGGTCCCTTGATCTGTATGTTA
CCGTAGTGAAAGCACTCCACGAATTGTTGCTATTGGTCTATTCACATTCTCTGATCTGAT
ACACTAACATATTGCATATTAAATAATTTAAGATTATACATTTTTGTTACGTAATTACTT
ATTAACTATATTATTTCTATTTGTTTGATAAAATCCTATTTCGTCCTGCACATTACTCCC
GCCGTGCGAGTCCGTCGCATTCTTCTCGGTGCAGGATGGTCTTCTTCGATGGGAAGGATC
AGTAGTTTTCGTACTGGTTTCCGTAGAACTCCACCCTTGGTTCTGATGTCTACGATGCGC
CCCACGTTGTCGGGACCTGGATATGTCACGATCGCTTTTCACTCGTGTGCGCGTGTTTTG
TGGCAGGCACTTCCACTTTTCATGGCGAAGCCTTGGCCATAAGGCTCCCGCCGGTGCTGC
AGCTGCTATGTTTACTTTATCTATTAATTTTGTTGTTGTTACTGTCGCCGATTCCGTGGG
CCAGGAGTCTCGTCGTTGGCGTAGGAATTCTCGCCCTTTGAACCATCTATGTTCGTTGTG
GTATGTCATTGGGACATCTCGAGTCACGTCGTCGGCTGTATTGTGCTTCGTGGGTAACAA
TCGCCTCCCGTTTCCTGTTGAACTGTCTTCTGTAGCTGTCAGGCGTTGGGCAACGTATGG
TTTGTACGAGCGTGATCCCGTTCTTGTCCATCTTAACACTATCTTACTATCGGTCCAGAA
GGTCTTCGAGGTCGGCTTTCTTTCGTGTTTTCGACGAAAGTCTGTAGTTATGTGCACTGC
ATCTTTTAAACCTTTAAAACTGTCTAAGTAGTCGTCTTCGTAGTGTCTGTTCTGTACTGC
GACTGCCGCCTCCGGGTGCGTGGCTTCTTGTTTCTGGGCGGTCAAGTTCTTTACATATAT
TGCTGTGGAAGGAGAACTTGACGCCCCGAAGATCAACGAGGTCATTCTGTTTTCTTCTGG
GGGCTTGTCATCTCGCTGATCTTTGCGCCAGAGATAACGGAGCGCGTCTCTGTCTTCAGG
TCTCAATTTTACTTGTATGAACATCTCTTTGATGTCTGCTATTACTGTTATATTATGCTG
TCTGAATCGCATTATCACTCCTGGTAGTGATTGGAGTACGTCCGGTCCCTTAAGCAGCAT
ATAATTCAAAGCTACCCCTCCTGTTCTGGCGGCGGCGTCGTGGACAACTCGGAGTTTTTC
CGGCTTCAGGGGGTTCACGACGGCGAAGTGAGGTAGATACCACGTTCTGTTCTCTGTTTT
TGTTTTTGGAGCGGGCTCGGCGTAGCCTTTCGCGACGAGTGCTTCCATCTGTTCTGTGTA
TTTTTGTTTCAGTTCCGGATTACGATCGAGTTTGTTTTCTATATTTATCAGTCGCTTTAA
CGAGTTATTGTAGTTGTCTGGTAGACTGACATTATCTGTTTTCCAGAGCAGAGCAGTTTC
GTATCTTCCATCTGTTGTGTGGACTGTATTGCTGTTGAGGATGCGAAGCGCCTGTTCCTC
TGGGTCTGTTTTTGGTCTTCTTGGTGTGATGCATAGCGCATCCATAGCGAAATACTGTTT
TACCAGATTTTCTATTTTATCATCTTCCTGGGTTTCGCTAGCATGATTTATATAGTTTAA
ATGGTGGCCTAGGGTACGAGTGCGACCTCCGTGCAGTACCCAGCCTAGAGGTGTCAGTGA
CGCTATTGGCTGATTCCTGTTGCCTCGTCTAACTTTCGAAGCTAGTAGCATGTGCCAGTT
GTCTTGGCCAATCAGGATTCCAGGTTTCGCGTTCTCGTACGTGATGATGTCACTGATGTC
TCGTAGGTGCGAATACTCGTCTATCTGTTCCTTTGGTATTTTTTGTGCTGTTACTTGTAG
GTCGTTAACTGTTCTCGCTTGTATTATTTCTTTTCGACTGTTGAGGCCTCTGAGCGTGAG
GTTGACTCTTCTTGACCTTGTTTCCGTTGATTTTATGTTGTTAATCGCCTGTATGTGTAA
CGGATCGATTGGTCCTGTTATTCCAGTCTTCTTGCAGATGATTTCGTCTATCACTGTTAC
CGTTGATCCATCGTCGAGCAGCGCGTATGTATCAACCGTGCCTATCGGTCCTTGTACTTG
GACTGGGATTATTTTCAAATAGGACTGTTTCTGTTTTCCGGTCCAAGCGGAATTAATGTT
CTCTGTTGTTTCGTTGTCACTGTTGTCTGTTTTTTCAATTTTTCTGTCGAAGTGTAGCAT
CTTGTTGTGAGTATATTTGCAATTATTGATGCCACACGTCTTCGGTTTACAGTTGTGGGT
TTTATTCTTATACTGTAGACATCGGAAACACAGGTGTTTATTCTTAGCGATGTCCCATCT
TGTGTTTGAATCTGCCTTCTTGAATATGTAGCAGTCTGTTGTGGTGTGTTCGGTGTTGCT
ACATAACGGACATTTAGCTCGTGATGGCTTCTCACTGACTATGTGCACGTTTTGTGTGCG
TCTGTTATGTTGTGCGGGCTGCGAGTAGTGCCCCGCCTGTTCGGGCTGTGCATAAGGGCT
GCACAGTTCGGCTTCTCTTTTCATGAATTTTTCAAATTTAATCAGATCCGGATCCTCCTT
CGGTTGTACCGCGGTGAAGTCGTAGTATCGGTAACGTAGTGTCGGTGTGAGTTTTTCTAA
TATTGTTTTGGTAGTTTCCGGATTATATAAGTAATGTGTGCACTTTAATGCACGAAGCGT
AGCTACGGCGTTGGTCACCTTACTGGAGAATATACATATGTCTCTTGGTGTTTCTGTTAG
TCGTGGCAGAGCTCGTAGCGTGTCTAACTCCGTTATGGCTATTGTTTCCGGTCTTCCGAA
TCGCGCTTCTAGACTTCTTATGACGTCGGACGGATCAGCGTTCGTTATAAGTAATCCGTC
AACGGCTTCCTTTGCCCTTCCTTTCAGGTTCCTTCTGAGTCTGTTTATATTTTCTGTTTT
TGTAAATGAATTCATCGTCTCGTGATAGGCTGCACGAAAGGATAGCCAATCTTGGTGATT
TCCATTAAAGAACGGCAATTCTGTGTATCTTGGTTCGCGGGCGGCTTTGACGGCGAGTGT
TATTGCTGCGGTTAGATCTGAGAAGTCTTGTTTGTCGCAGGCTCCCGCCGGTGTTTCCTT
ATGTCGGTCGTGATTTTCCGTTTTTGTGGGTTGGGTTTCCAGCCACGTGCCCACTCTTTC
AGCGAGTTCTGACTTACTGTATTCTGATTCGCTGTTTTCGTCATCAGATCCAGCTTCGAG
CGTGGCCAGTCGGGCGGCTGCCAATTCCACTTGTAGGCGGGCGAGCTCTTCTCTAGCTTT
GGCTATCTTCTGTTCTTTTCTGTTTCGCGACCGGTCAGTTTTGACTGTACTGGCGCGCTG
TTTTGTTGGCACGTCATTCTGTTTGACTATATACTGTTTGACGGCCTCTGTTTTTGAGTT
CCCAGGTTTCTCTGCGAGTTTCGTCGTGGCTTCCATGTTGGCTGTTGCGCACGATGATTC
TGTTGTGGGGGCTACCAGACTCATGACGGTATTCGCGGCTGTTTCTGTCCACACGCTCTG
TGCTGTAGCTGTGGTTTCTGAGGGCGGCGATTGTTTAGTTTCGATTCGTCCTCTTCCTGT
TGACCGCGTTATCGGCATTGTTCCAGTTTCCTTTTTTCAAAACGTATCCTCTACCCGGCT
CGAAAAAATAATGAAATGTGTCCTCTATCCGGCTCGAATGGACCATGAAATGTACACGAC
CCGGTCTGTATGGCTGTTTCCGAGTCGTGTAATAATATTTTCTGCTGTCTGTTTGTGCGC
TAGTAGAAGACGGCTGTTTCTTTCGATGGGTATCGGCTTCTGTAGCGAGGTTTCACAGGT
AGCTGATTCACTGGTGGTAACTGTACTATCGGAGAACTGCTGGTAACTGTTTCTGTCTTG
CTGATGTTTCTGTGTCGGAGAGCTTCTGAGAACTGTTTCTGTCTTGATGATCTGCTGAGA
ACTGTTTCTGTCGAAGATCCACTGAGAACTGTTTCTGTCTTGCTGTTTCTATGTCGGAGA
TTCGCTGAGAACTGTTTTTGCCTTTTTTTTTTTTTTTTTTTTTT
(6944 bp)

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