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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41003_c0_seq2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		putative_Chromodomain_helicase-DNA-binding_protein_Mi-2-like_protein_[Danaus_plexippus]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007517 P muscle organ development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035327 C euchromatin
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0051276 P chromosome organization
GO:0051312 P chromosome decondensation
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0071923 P negative regulation of cohesin loading
Transcript
Level		FPKM:7.24 TPM:5.72
ORF EntryO_BomoMG23508_3prime_partial:A_BomoMG_comp41003_c0_seq2
Sequence
(Nucleotide)
TGCCGTCTCTTGAAGTGCGATGGTTGATCACACGGTGTACTACAAGCCACTCAGGTTTGA
CGCCATATCTATAATACTTCTCTTCGAGTAATTTTTCGTTGTTAGATTCCGTATCCTGTT
GTTTATCTTTGAGTCGTTTGTACCTACTATCTCGTTCATCGAGGGGCTCTTCAAGTTTAG
GCGGTTCTTCGGGATCCGACTTACGCATGTAGTAACGATACATTAGTGGATGGAACACGT
CGAGCTGTAGTTCAGATATCCAGCTGCAGTGCCAATAAGATCGTTCATGCCACTTCACAA
AAAATTCTCTTGAACGCGGAGCCTTGGACTTGCTTGACTGTTCCTTCCAACGCCAAGTTA
AAATTTTGGCCACTTTTCCATCCAATGGTGGACAACTGCATCTGGGACATTTCCACTCGC
CATCGGGAATTTCTTCAAGCGGCGGATTCAAGCAGAACCGATGATACGCTGAAGGACAAG
AATCGCAGCATAACAACTCGCCGCCGTCCTTACAAATTCTGCAAAACTCCTGATGTTCAT
CGTCGTCGTCATTGTCGGGTGCGGGCTCGGCCTCGCAGTGCGGACACGACCAGCGGCCCT
CCGGCGTCTCCTCGAGCTCGGGGTCGAGGCACACGAGGTGGTAGGCCCGTGGACATGTGT
CACACAGAATTATCTCGCCGCCTTGCTGACACACCTCACAATAGTCCTGATGTTCGTGCT
CTCCCTCAGCACCATCAGGAAACTTGCTGGTCGTCTTCAACTTCCTTTTCTTTTTAGATT
TGTTTCCGATCTTTGTCTTTGCCTTCTTTTTAGGTAGCGCCGCTGTAGGATCTTCTTCTT
TAGGTGGCGCGGCTTCGTCAGCTGCAGCTGCAACAGGAGGCTTTGTTTCCTCGGCTTCAG
CTAACATCTGCTCGAACTCGGCGTCTGAATCTGAATTTACAGCGCTGCCTTCTTGTTCCT
CCTCGCTGCTGGTTCGTTTTCTCTTGCTGAACTTGATCTTCAGTGTAGGTACTTTAGGCT
TCCTGCCGGGCTTGCCTCGTGGCGTGACGGCGCCGGTCGCATTCTTGGGCTTGCGTCCAC
GTTTCCGCGGCACAGTAGCGCCTTCGTCACTTGCTTCTTCCTCCTCTTCTTCTTCGGGCT
CCTCTATTGTCTCATCAGTCTTTGCTTCTTTGGGTGTGCGTCCGGGTCTCTTAGAGACAT
AGTCAGAAGTAGCAGAAGTATTTGTATTCTCTTCAGAGCCCATACTTTGTGGTACACTAG
TGCTTAAGTGTGGATTCGTTTCACAGAACATCCGCCATTTTGCAGCTACTAGCATCATTA
ACTTTGATACTGGCACCTTTGGATTCTCTTTAACGAGCATTGGACGAACATGTTGTTGAA
ACAGTTTGTATGTAGTCAAGTTTTCGTAGTCCGCATCCGCATATTGTATGTCAACATCGG
TAAGGCCGAACGAGGAGCACACCTCCTCGACTGTTGGCATACCAGAGCCAGAGTCTGATG
CTGTAGTTGTGGATGGTGTGTTGTGTTTGCTACTTCGACCTTTACGGGATTTCTTGCTTG
AAGAGACAGCGCTCAGTGCATAATCACTGTCACCTTCTGCTTCCATCTCGAGGCCAAAAT
CATCATCATCTTCACTTTCATTCTTTCGCTTCTTCTTTTTCTTTCTTCCCTTTTTTTCTT
CTCCTCTGGCTTTCCTTTTCTTTCCCTTTTTCTTTTTTCTACCATCTTCAGGGGAATAAT
CTTCATCTTCCTTTGGTGGAGCCTCGTCACTATCTCCGGAATTGTCATTTTGACCCTCAC
CTTCCTCTACTTCCTCATCACCTGCAAAAGAGCCGTCCACTTCCTCATCTGATGCCATTT
AGATTACTATCAAACACAACTTGGAATAAGATGATAGATTTTTGGCTAGAAAAGATAAAG
GACGCGCAGTTTTTGCGACAAATGGTAATTAATTCAGAAATTGATGCCGCCGTCACTTCT
CG
(1982 bp)

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