SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40988_c2_seq18
Scaffold_idBomo_Scaf031
NCBI non-redundant
(nr)		PREDICTED:_mod(mdg4)-heS00531_isoform_X3_[Bombyx_mori]
Ontology
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005730 C nucleolus
GO:0005886 C plasma membrane
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0007060 P male meiosis chromosome segregation
GO:0007141 P male meiosis I
GO:0008195 F phosphatidate phosphatase activity
GO:0008354 P germ cell migration
GO:0010032 P meiotic chromosome condensation
GO:0016311 P dephosphorylation
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
Transcript
Level		FPKM:18.47 TPM:14.60
ORF EntryO_BomoMG23297_complete:A_BomoMG_comp40988_c2_seq18
Sequence
(Nucleotide)
GTCGGGGGGAGATCAAGAACATCATTCAAACGGGGAGGACGTACTTCAGAAATGTGTAAA
GTGCTCTGTTGGGAACATTGAGTTATATTTTTTTCAAATGTTTCTCCTACCGGAATTATA
AGTACAAAGCTTAGGATAGGTTCCACGTCGAGTCGTCGCTATCATGGCGTCGGACGAACA
ATTTTCACTATGCTGGAACAATTTCCACGCAAATATGTCAGCGGGCTTTCATGGCCTGCT
GTCGCGTGGAGATCTCGTAGACGTAACGTTGGCTGCCGAAGGCAGGTTATTGCAAGCACA
TAAATTAGTTCTATCAGTATGTTCTCCCTATTTTCAAGAAATGTTCAAAATGAATCCAAC
ACAACATCCGATAGTATTTTTAAAAGATGTTAGTCATTCTGCACTAAGAGACTTATTACA
GTTTATGTATCAAGGTGAAGTTAATGTTAAGCAAGAAGAATTAGCATCATTTATTAGTAC
AGCGGAACAACTTCAAGTTAAAGGTTTAACCGGTAATCAAAATGAAGAAAGTTCCACGCC
ATCCAAACCAAAGCCGACTTCGAGGCCAGGCCCCAGGTCGTCACAACAAAGACAATCTGT
TATGACTAAGTTAGAGACTGATCTAGATTCTAAGCCCTCCTCAACTCCAGTAGCCGTTAA
GAGGCCAAATAGGCCATCAATAGCATCAAATAACTCTTCTTCCTCACAAAGTGGACCAGC
GAAACGAAAATGCGTAGATCCACTGGAAGCAGGTCCCTCTGGTTCTGCAAAAGACGAATT
TGTGACGATACCAGACGAAGATGAGAACAATGCTGTCGCTCCCAAAATGGAACCAGAGTT
TGTTAATGAGAGTATGTGGGATGACGATGAAGATGGCACGAACAATGACGAAACTAATTA
CGGAGAGGACGATTCTAATATGGAAATGACTGGTTTTGATGGCTCTGCAACTGGAGATGT
TAATATTTCTGGAGGTGAAGGTGGAGCAGTCGGCGATGCACAAGGTAGGTTCGCAATTTC
TTATACAGAACAACTCTGCGATACGTCGGAGAGATGTTCGCTTCAAAAGCGCCAGAATGA
TCCTTCTTTAATCAGTGGACCTATGTTAAGCTCAAGGATCATGAAGGTCATTAGTTTTAG
TGATGAAATTTGTAAGTTAGACCTAAGTAGTTTGTAGTAGACTAAATTAATTTAATGTTT
CAGGTATGTATTTTAGTAGGCAATGCTTCATATGATCACATTCAATGAAACACTGTCTAG
CATTCTAAAAGCTGGTGGTAAAACTTTGGTAAAAGGTTTTTAAAAAGGTTAAAAGGTATT
CGTAATTCCAACAGGTGTGTTTGTATGGATTTTAAGGTAACTAGTTTCTGGTCTGGTTGC
GATATTATGGTATTTAGGTTTTTTATGTACAAAGTGATTAGAATACAGTAGTCGGTAAAT
GGTAAGACTGCGCTCTGGCGCGAAACCAAACTTCAGCATGACTGAACTTTTACAAGGTAG
CTTTCATGGCGCCGAATGTTGCAGCGAGTGATCATGTGAAATCCATCTCTCTATTTCAAA
CTTAACACTATGGTAAAACTTGGATGAATGCAAAAGTTTTTAATGCCCGGGTATGTTCGC
TGGACTAAATATCCGCATGATTAAGGATAAGTATCTGCGCACACTGGCCATCAGCTACAA
CTGCTGCAGATGTATTTCCTGTCTCCATAGCTATTTTATATGGGCTCTTATGTATACTGT
TTACACCGGTGGCCGAAGCTCCAAGGTGTCTGAAAATTGCAGGAAATATGTCTGGCGTGT
TGTGGCTTATGTCCGGCGACCATAGATTGTGGAAGTTCAAGCGTGATTGTCACGATGTAG
GTATATCAATTTCGTAAGGTAATTTGGAGGAGTAATGGTAAATTGTTGGTTGGGTTGATA
TCAATCTTTGAGAAAATTAATTGTGCGCGGAAATTGTCCCTAAAGCTAAAACAAAATTGA
GGTTAAAAAACGTGAATCCTAACTTTCAAAGCTTGATAGTGCTTATGCTAGTATCCCAGA
AGTGTTTGCTTACTCTACTAATAAACCCAGAATACACAGGTGATTACTGGTTATAAAATT
CAAGAACATTCGCAAGCGCTTCATACTGCGCTGTTGTCTCAATCTCCCGAAATTTGTCCC
TTCCGGAGCGTAGGTTTTAAGTTTAAAATGTTTAAGGGTTCATCAATCGATAGCGGACTG
GACTGTTTGGTATGCTTAAGGTAAGTATAGTATGTATCCTATGCTAAGCCGGAAAACTTT
AGGGAGATTTGTTCTGTGTAGGTAAGATGATAGCTGTTGGCAAACTTCGTAAATAGGTAC
CGTAAAACGGGATGAATAAAAACGCAGGGGTCAATAGATACAAAACAAAAAGTTTCTGCA
TATTAAAGCCAACTATTTTGAGAGAAAAACGTTCCGAAATTTGTGTTAAGACTGCAGCAT
TATTTTTCTTGAAATAGCAGCACTTAATTGACGTGAGGTTTGTCCAACATAATAAAAGAG
ATCTTGCAGTGAGTCCCTTGAATGCAGGTTAAACGAGGTCCTATAAAATTCGAGGTTAAT
AGACACGGGGAAGAGGCTAATAGATACAAAATATAGGTTCAATAGACACGTGAAAGGGTT
CAATAGAAACGAGTAAGAGGTGATTAGAAAAATATTATGTATTAGGGCTGCCACATATAT
CGGCTTCCCCCCGGTGAAGGTCAAGGGGCGACCTGAGGGGGTGAGGCCGCGCGGCGCGCT
ACCAGCACTCTAGCGCGCCGCCGTGGAGTGAATAGAGCGACCGGTCGACGGTGTATCGCG
TCCCGACCCGGCAGGCTGGTTCTGGTCCAGCGGGGTATTCCGGGACACCAGCGGCACCGT
CTGGGCGGCCCGACGGGCTGCCGTACCGAGACGGCCGACGTTTCAGAGCCTTCGATTCGC
CTCGAAGGCTCCGTCGGCTGGGCGTCCTTGGGGTGAGCCGCGCCGTCTGGTTGTAGTGTT
GACCGCGGTAGCCCCCCTACCTCATCCGGGTTCTGACCTCGGAGGAGATCGGACGTCGGG
TGTAAGA
(3067 bp)

- SilkBase 1999-2023 -