SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40976_c1_seq30
Scaffold_idBomo_Scaf011
NCBI non-redundant
(nr)		endonuclease-reverse_transcriptase_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:2.82 TPM:2.23
ORF EntryO_BomoMG23206_5prime_partial:A_BomoMG_comp40976_c1_seq30
Sequence
(Nucleotide)
GAGCCAAGCATTCTCCTGTCTGAGGTTAGGGCTGCTATAAAACACCTCAAAAACAGGAAA
GCGACTGGTAGAGATGCAATTCCTATTGAAACAATAAAAGCCTTAGGAGAACGCGGTGAC
CACATATTTCATAAGATATGCAACAGGGTATGGCAGACGGGAGTTTGGCCGTCGGAATGG
ACACATACCGTGTTTACTCCCCTGCATAAAAAGGGCTCTACGAAGAAATGTAACAACTAT
CGTCTAATTGCTCTTACATCACATTCTAGCAAAATTATGTTACATATTCTGAATGAGCGA
TTAAAAACCTATCTGTCCAAAGAGATTGCTCCGGAACAGGCCGGTTTCGTGAGGGGGAAA
GGCACTCGGGAACAAATTTTCATCGTACGTCAGATAATTGAGAAAGCAAGAGAATTCAAC
AGGCCGACATACATTTGTTTTGTTGACTTCTCCAAAGCATTTGACTCGGTGAAATGGCCT
GTTTTGTGGAGGACCTTACTGGATCTGGGGACACCGAAACATCTTGTGCACCTACTGAGA
CGCTTATATGAGAATGGTACGGCCTCGGTGCGCGCGGATGACGTTCTCTCTGATAACTTC
CATCCAAGTGCTGGGGTTCGCCAAGGTTGCATTGTATCGCCGCTCTTATTCAATGCGTAC
ACAGAAATCATAATGCGCATCACTTTGGAGAACTGGACAGATGGTGTAGCAATTGGGGGG
TATAGGATTGCAAACTTGCGATACGCGGATGATACCACTTTGTTTGCAACTGATGCGCAA
TGCTTGGGGGAGTTACTGTCGAGGATGGAACGTGTGAGCCTTGAGTTTGGATTAAAGATT
AACCGCAGTAAGACCAAGGTGATGATTGTCGATCGCGCTATGAATAACTCGCCGGACGTG
ACTCAAATAGCGGGTTGCGACGTGGTCCAGTCCTACATATACCTTGGGGCGTTAATCTCA
AATAATGGCGGATGCATGGACGAAATCAGAAGGCGCATGGCTATCACGAGGTCGGCGATG
GACGGGCTGAGGAAAGTATGGAGAAATAGAAACATAACCAAAACCACAAAGATCAGGCTC
GTTAGAACACTAATATTCTCTATATTTCTATACGCTGCTGAGACGTGGACCGTGCGAGAC
GTGGAAAGGAAGAAAATAGACGCTCTGGAAATGTGGTGCTGGAGAAGAATGCTTGGAGTT
TCGTGGACCGACTTTCGTACAAATGTCTCGATACTTCAGGAACTCGGCATCAAGCAGCGT
CTATTTGGTATAGTACAGTCTCGAATGGTGAATTTCTTCGGACACGTTTCGCGACGAGAT
GGCCGGTCCATAGAACGCCTCGTTGTACAGGGAAGCGTTGATGGTACAAGACCGCGCGGG
AGGCCACCAATGCGGTGGACCGACCAAATTAAAACTGCAGTGGGAGGTCCCCTAAATGAG
TGCAGTAGAATGGTCTCGAGCAGGGAGAGATGGCGCGACATCGTGAGACGCATCAAGTCT
GCCCCTTCCAACACTACATGACGATCACGACCACTCTGTCAAGAGTGACACGACTGAGAA
GAAGAAAAACCCGATTATTTCAGGCGTAATAATTAATCTTAATAGTCATTGTATGATTTT
GTCGTTGTCTTATAGGTAACTGGCTGTACCCGTCCGCTTCGCTGGGTAAAATTAACATTA
TTATTTCTCAACCCCGCAAAGATCCTCAACATTGACGCCCCCGCAACTAG
(1730 bp)

- SilkBase 1999-2023 -