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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40972_c2_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0070742 F C2H2 zinc finger domain binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:7.28 TPM:5.75
ORF EntryO_BomoMG23140_3prime_partial:A_BomoMG_comp40972_c2_seq1
Sequence
(Nucleotide)
GCAAGATGGTCGTGTTCAATTCTTTTTAAACATAAACATTTAATCTAATAATATTGTATA
TAATACGAAATAATGTATAATGGGATCGGGTTGACGACGCCACGGGGCTCCGGTACAAAT
GGCTACGTACAGCGAAATTGGGCCACAGTAAGAAAAACAAAAGACTCCGTCAACTACCGG
ACTGAAGATGAGATCGCCAAGTTGGATTCGGCGTCAAACAAACAACCAAATAGAGAAATA
CTCGATCATGAGAGGAAAAGGAAGATTGAAGTCAAGTGTGCAGAGTTGGAAGATAGCCTG
GAAGAACAAGGGTTCCCGAAGGATGAGATAGCGGCGCGGATTGCTGCGTTCAGAGCGAAA
ATCTCCGAGACCAGCAGCGGTGAGAAAGATGTTCCAAGGGACGAATTCGGGAGGGTAGCT
GTCCGCGAGACGCACGCCGTTGCGGAGGCTCAGCAGGAGAAGAATGCAAGATTACGGGAC
GCCTTCGGGATATCGCCGCGGTTCGTCGAGGGCTCGAGCCTGGACCCGGAGCGAAGGGCG
AAGGAACAGGCCGAGAGGTACCCGCTCGTGCGCACGCCGAGCCACGAGAGGGAAGACCAT
GCCGCCAAGAAAAAGAAGAAACGAAGCGCATCGCCCGAACCAAAGAAAATGAAGAAGAAA
AAGTCGAAAAAGAACAAGAAAGAAAAGCACGAATCAAGCAAAAAGAAGAAAAAGCGTTCG
AAATCTTCTGACAGCGACAGTTCGAGCAGCTCCGAGGGCGCGGACTCCGACTCCGCCACG
TCGGACGACGAGAAGCAGAAGAAAAAGAAAAAGAAAAAAACCAGCAAACGTCGCACCAGC
ACTCAACCGACCTCCCGTGATGTCTCGCCAGTGAAGAAGTCGAAGGATAAAAATCGCGAT
CGATCGATCGAGGCGCGGCGGGAACGTTCGACTGAGGACCGACGAGGCGACGACCAGCAC
AGGAGGGACGACGCCCGGGACGGCAGGAACTTCAGGCGCGTCCAACGCAGTCGCTCCAGA
GAATCCTCGCACGAGCCCAAACAGCGCTCCTACATCACTAAAGTGGACAACAGAAAGCGG
GAACCGTCCCGGGAGAGGTCCAGAGAGAAATCAACTAAACCTAGGGACGAGAAACGATCG
CGCCGCGAACGAGACCGCAGACACACTTCGGGCTCCGACGCGGAACAAGCGCCGCACAGA
AACAGGGACGCGAAAACTAACAAGTCGCTTAGAGACAGTAGCGCGTCGCCACCGCCTGAC
AAGAGGCGACGCACCAGCCCCGACCACAGGAGCACCGAGCGAACAGACAGGGACAGCAAC
AGGACTCGCAGAGACACTCCACTAAGAGAACACAAACGCGAGACCAGACGAACTAACTCG
CCAGACTACCAGAAGCCAAGACGCGAAGAGCCCCATTCAAAGAGAAACAAAGAAGACGCG
AGACAAAGAAACAAAAGCGAAGACCGGACCGACGACAATCAACAGAAACGCAGGGAAAAG
GAAGTTCGCGACGAGCCTAGACGTAAGAAAAATAAGAGCCCGTCCAGAGAACGCCGCGAG
ACGTCCCCGGAGACCAGGGACAAGTCACCGAAGTCTGCTAAACAAAAAGAAAAACGTAAA
GAAGCGGAGAAGACGTACAAAAAATCCAAACCGAGCAGACGATCTGTTTCGTCCGGATCT
GAATCCGATCGTTCTGCTAAACGTAATTCTGATAGAAAAACAAAAGGCTACGAACGCTAT
TATAAAGAACGTACCATGTCACCCGCAAGAAACGAAAGGAAACAGGACTCGCCATCTCCC
GATAAGAGAACACAGTCACCTCCTGCGAAAACAGACAGATATAAATATCTGAAATCACCA
GAGAGACCAAAGAGTCGATCGAGACAAAAATCTCCCTCAGCAGAACGAAGGTCGCGGCAT
CGAAGGTCCGCCAACAGATCTGAATCTCCTCTCCGCAAAAACTATGGAAG
(1970 bp)

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