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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40951_c2_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_homeobox_protein_3_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007050 P regulation of cell cycle
GO:0007420 P brain development
GO:0007517 P muscle organ development
GO:0008270 F zinc ion binding
GO:0016604 C nuclear body
GO:0019899 F enzyme binding
GO:0032922 P circadian regulation of gene expression
GO:0043231 C intracellular membrane-bounded organelle
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045662 P negative regulation of myoblast differentiation
GO:0045663 P positive regulation of myoblast differentiation
GO:0045664 P regulation of neuron differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071559 P response to transforming growth factor beta
GO:1904059 P regulation of locomotor rhythm
Transcript
Level		FPKM:4.85 TPM:3.83
ORF EntryO_BomoMG22841_3prime_partial:A_BomoMG_comp40951_c2_seq1
Sequence
(Nucleotide)
CACGGAACTAGAGCGCACTCGTGCCCGACGACGATGCCGGCGACATGAGCCCGGAAGAGG
AGCCGCGCAACGCTCCAGCGGCACCGGCGGCGCCAACGCCGGCGCCCTCATCCGCCCCTG
CGCCCACCTCACCGCCCGCCGCGCCCGATGCCGTGGACCTCACCTCCCGCCGTGACTCCC
CGCCCCTCTCCTCAGACGTCGAACGATTTGATGGCAAAATTGTGTACAACCCCGACGGTT
CCGCCTATATCATCGAAGATCCCGAAATGTCAGAGGGCGAAACAAGCTTATCGGAATTAT
CAAAAATTGAACCTGGGTGCATTGTCGATAGCCGTGATAGCAACGTCGTCGAAAAGCAGC
TTGAATTTCCTCAAATAGCCAGTGCTTTCTATGTTTCAAGAAACCCATCGTTATACGGTG
CACTTTATGGAAGACTGGCCGTTGAGAGAGCACGAGCCAGGCCTGACGCGCCTGTTATGC
ACAGCTATCGAGTGTTTAGTTTTAGAGGTGGAAAAGACACTCCTAGACCGTCATCCCCGC
TAACTGAATGTCCAGTCAGCGTACCGGTCAAACCAATATTAATGTGCTTTATATGTAAAT
TGAGTTTCGGCTACGCCAAGTCTTTTGTGGCGCATGCCCAATCAGATCACAGTTTATCGT
TACTAGACTCTGAAAGGGACGCTTTATCGAGGGAAAATGCATCAGCAATTATTCAGTGCG
TGGGGAAAGATAAAGAACCACTAGTCTCATTTTTAGAACCAGTAGGAGCTGCAGCCCCAT
CTCGCATTTCTGCTTCAGGTAGTCCTGCAAATATGTCAGAATATTCAAACCCTTCAATAG
ACAAACGAGCAGAACAAATGACGTCAGATAGAGAAAACGATTCAATGCTACCTAATGGCA
CATGTGATGATAGAAGGCCTAGTCCAAACACATGGAGACCACCAAGGTCAATAGCTGAAT
CAACAATGATTCCTCAACATTCCTTGATCTCTGTAGCACATCCTCATACGATTAACGCAT
CAGTTCAACCACGAGCGAGTCCGAATTCTTCTCCACCGTTCCAAGCCACTCCACCGGCTT
TCCTATCTGGGACAACGATAGGAGTTTGTCCGGACCATCTAGGCGGGCGTCCATCTGGAG
CCGATTGTCCGAAGTGCGAATTAATTTTAAATTCAGGACGCTTAGGCGGTCCATTAGCAG
GAATGCACAGTCGGAATTCCTGCAAAACATTAAAATGTCCGAAATGTAACTGGCATTACA
AATATCAAGAGACTTTAGAAATTCATATGAAGGAGAAACATCCCGAAGCCGAAACTAGCT
GTATCTACTGCATAGCCGGACAACCACACCCGCGACTTGCCCGTGGTGAAACCTATACGT
GCGGATACAAACCCTACAGATGCGAAGTGTGCAATTACTCTACAACTACCAAAGGTAATC
TCAGTATACATATGCAATCGGATAAGCATCTTAATAATATGCAAGAACTACAAAACGGTG
GTAACCCAGGCGAGGGAGCTTTACCACCTGCACCGCAACACACGCCTCCTGGTGGACACA
AACCACCTCTGCCACACCATTCACCTCTTGGCCAAAAACCAAAACCGACCTTTCGTTGCG
ACGTATGCAACTATGAAACTAATGTGGCGCGCAACTTGAGAATACACATGACTTCCGAAA
AACATACGCATAACATGTTGGTTTTACAGCAAAATGTTAAACATATGCAAACATTATCAG
CGTTACATCATAGACAGCAGAGCCAACAACAGCTGGAGACTCTATTACATTTTCATGGAG
GAGACGCGCCGCCTCCCAATCCAGAAGCTGCCCTCGCTGACATGGCTTACAATCAAGCGC
TAATGATCCAACTGATGACTGGAGGTCCTGGACCGTCTCCTCCAGAATTAGGCGCACACC
TTGACGTCGGCCTAAATCCTGAAGCCATGGAACCCCCACCGGAACCAGCAGACCCGGAAC
CGGAAAGGACCTTTCATTGTTGTATTTGCAATTGTTTCTCGACTGATTCTTTGGAAGCAT
TGGGACACCACTTAGCCCAAGATCGTACAAAAATCCGGGAACAAGAGATACTAGCACTAG
TTGCGGGTCATTATGTCTGTAAGCTCTGCACTTACAAGACTAATTTGAAAGCGAATTTCC
AGTTGCACTGCAAAACTGACAAGCATTTACAGCGGCTGCAGCACGTGAACCACGTTAAAG
AAGGCGGCCCGAGAAACGAATGGAAATTGAAGTTCTGTGGGGCTGTGGGGACTGGTGGGG
CGGGGGTCGGAGGGGTCCAGGTGCGGTGCTGCGCCTGCGACTACTACACTAATTCGGCCC
ACAAACTGCAACTCCACGCAGCAGGAGCTCGACACGAAGCCGCTGCTCTATTGTTGAGAC
ATCTTCGGGAGTGCGCTTCGAGGATGCCACGGGAACGACCTCGCGTCTACCGCTGTGCTC
TATGCGGCTTCAACGCTCCGCATCGACTTCCGCTGTTACAGCACGTGCGTTCGGTAAAAC
ATCTACAGATGGAACAAATCCATCAGCTCCAACGACGCTCCGAAGGGAAAGACCCGACGC
CTGACGTCGCTGAACTTTTCCAAGTCATACCTCAGCCCCAGGAGTTGTCCTATGAACAAC
AGGACAATGACACCAAAGAGCCTATTGATCAGAAACCAGAACTGACCCAAGAACAGAAAA
TGTTGCGATTTCTCGAACATCACCATCAACAGCAGCAACAACAGCAACTTCAAACACAAC
AACAAAATCAACAAGCCTCAAATGACAGAGACGAAGAAAGGGAAACTCCAGGACCTCACG
CGTGTCCTTACTGTAATTACAGTTGCCCGAGTGAAGCTCGTCTACACGCTCATGTCACTT
CCGTGCACGCTGACACTGCACGTCATTTTATTTGTCCTTTATGTCAAGATGCCTTCAAGG
ATCGACCTGCCCTAGAACGACATGTAATGCAAATTCATTCAGTCAATTCAGAAGGCTTAC
AGAGGCTACTGCTTTTAGTAGATCAAAGTCATTGGCTAAATGGTGGCACCCAGCAAAGGG
ATGAATCTCGACAGGGTGACGAAGATAGAGAAATATCATCTCCACGCTCAGAGGGTAGTG
CTGATGGAGAGATGGAACGGTGCTCGACATGCAGCCGAACATTTAGAAATGTAGATGAAT
TATGTCAGCACCAAAATGAAACAGGACATTTAGAACTCAAGCAAACGCCTCAAGGGCCGG
GCTACGTGTGCTGGAAGAAAGGATGCAATCGTTACTTTGATGCAGCCCACGCCTTGCAGA
ATCATTTTCGGGAAGCTCACGCACGAAACTCGATCGCTAACATGTCAGTATCAGAGAAAC
ATGTTTACAAGTATCGTTGTAACCAATGCAGCTTGGCGTTTAAAACAGTGGAGAAACTAC
AACTGCATTCACAATATCATGTCATCAGAGATGCGACAAAGTGTGTGCTGTGCGGCAGAA
GTTTTCGATCTGTACTCGCTCTTCAGAAGCACGTCGAAACTTCACATCCGGAACTATCCG
AGGATGAGCTCACTGCTTTTAAACGTAGCTTAGCATCGAATCCATTGATGCAGGCCGGAC
AAGGCACCGCTCTCGATGCTGCTACTGCAGAGCTTCTCCGTAAAGAAGCCCTAAGAACAC
CAGACGACGATTTAGCTGATATGGAGGATAGAGATTCAAGTGCGACTGTGGCCGATGAAT
CCGGTCACAACGACGCTGAAAACTCTGATGATTCAATAATTTACAAAGATCAACAATTTT
TGGAAGACTACCTAAACTCGCAAGCCATGGCTGAAGATTCATATAATGACCCGAACAGGA
AATATAAGTGTCACCGATGCAAAGTGGCATTCACACGTCAGTCATATTTGACAGCTCACA
ACAAAACCTTACTGCACAGAAAAGGTGAAAAATTAACTTATCCAATGGAAAAATACCTTG
ATCCAAACAGACCTTTTAAATGCGATGTATGCAAAGAATCGTTTACTCAAAAGAATATCT
TATTGGTACACTACAACAGCGTGAGCCATCTACATAAACTCAAACGGGCCATGCAAGAAC
AACAGAATAATAATAATCCTCCCGTATCGCCTGGAGCGGGTTCGGCGCCCTCTAATCTAA
CATTAACTCCCAAAAGTACTTCGAGTGAAGAAGACGATCGTAAACGTTACAAATGTAACA
TTTGCAAAGTAGCATATACTCAAGGCAGTAATCTCGACATACATATGAGATCAGTCTTAC
ATCAGACAAGGGCTGGCAAGTTGCAAGAATTAGCCGCAACTGGACAAGTCGACTTGACAC
GACCATTAGTAGAGCAACCAGATAGAAAGGACCCCGCTAAAATTTTACAAGACGTGCTGT
CGCCAAAAAATACATCCCCTTCGTCTACGAGCAGTGGGGGACCGCGATCTTCACCCCCCG
CCCGGCCAGGTAGCCCTCGTTCCCCTCGCGCAGGTAACGCCGCGTGCGATCGGTGCCACG
CGTCATTCCCGACTGCGGAGTTACTCGACGCACATCGTGCGTCTTCATGCCCGTTTAGCG
ATGCGCGGGCGCATTCGCCGTTAGGTGAGGCAGAAGCTGCGGCATTGGACGAAATGGTCG
CAAAGGGCAATCCGCCCAAACGTAACTCGCAAATGTACAAACAACTCTTAGAAACCTTCG
GATTCGACCTCGTCATGCAATACAATGAGAACCAGCGACGAAAGCTACAAGAGGAACGTG
AAATCGCACGCGCGCCAAGTCCGCCGCCACCGCCACCTGAAGAAAAGCCGCCGGACGGTG
AAAATAAATCGACATGTCAACATTGTAATAAAGAGTTTTCTAGTGTATTCGTTTTAAAAA
CACATTGTGAAGAAGTGCACAAGGATAAAGTGCCATTGGAGTTTTTGGAACAGTTCGCGG
AACAATTTAAGTCGGAATATGAAAGAAAATCAGGTGCGCCAAACTCGCCGCGTGCTGCGT
CTCCAGCACCGCAAGGTGAGAGGTCGCCGTCGCCGCGGGGTGACAGTAGTGCGAATTACA
ACGAGAACGGAAATGCGGCTGGTGAAGCGCAGGCCGGTGCGTTGCTAGCTGCTCAAGTGC
AAGAGATGCAAGCAGCGCTGAACATGATCCAGTTACAACAGCAGCTGGGCACGATACATC
CGATGGTCGCACAAATGCTATCTCTGGGATTGCCACTAGGATTGAATGTCGGGGCATTGG
CTGCAATGAACCTGCAACCACCTCTGGTACCAATAATGATGCCACCTCCGCCCTTTGACG
CGATGTCCTTCGCACACGACGCCCAACTCAAACAACAACAACTGATCCAGCAACAACAGC
AGGCAAATGCTGCGGCTGGACAGAAGCGAGCCCGCACTCGTATCACAGACGAACAACTCA
AGATTTTACGAGCACATTTCGACATAAATAACTCACCAAGCGATGAGGCCATCGCTAAAA
TGGCCCAACAATCTGGACTTGCCACTAAGGTAATCAAACACTGGTTCAGAAATACATTAT
TCAAAGAACGACAACGTAATAAAGATTCACCGTACAACTTCAATAATCCACCATCTACTA
(5580 bp)

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