SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40950_c5_seq3
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_pyruvate_carboxylase,_mitochondrial_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004736 F pyruvate carboxylase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006090 P pyruvate metabolic process
GO:0006094 P gluconeogenesis
GO:0006107 P oxaloacetate metabolic process
GO:0006629 P lipid metabolic process
GO:0006768 P biotin metabolic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0010629 P negative regulation of gene expression
GO:0016874 F ligase activity
GO:0019074 P viral RNA genome packaging
GO:0031406 F carboxylic acid binding
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044794 P positive regulation by host of viral process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:77.08 TPM:60.90
ORF EntryO_BomoMG22834_complete:A_BomoMG_comp40950_c5_seq3
Sequence
(Nucleotide)
AAAAAAAAAAAAAAAAAAAAAACGTAACGAATCACTAAAATGAAATAAACTGTGTTATTA
GGATATTAAATAGAATTATTAAGTTTGTACTTATTTAGTTTATCAATTAATAAGTTCACT
AGTATAAATAAAAATGCAAATACTAAAGGCAAGATTCGCGTTACGCGCCACAGCGTCGCA
ATTCCAGGCATGGAGCTCGGCCAAAACTCGGACAGCTGCTACGGACTCGAAGATAGTGGA
ATACAAACCAATCAGAAGCGTTCTTGTTGCGAATCGCGGCGAAATCGCCATACGTGTGTT
CCGAGCTTGCACGGAACTAGGCATCCGTTCTGTGGCTATTTACAGCGAACAAGACAAACT
GCAAATGCACAGACAAAAAGCCGACGAATCGTATATAGTCGGAAAAGGTCTGCCACCAGT
CGAGGCCTACCTCAGCATCCCGGAGATCATCAGGGTTGCGAAGGAGAACGACGTTGACGC
CGTACATCCCGGCTACGGTCTTTTATCTGAAAGGGCCGATTTCGCCCAGGCCATCATTAA
TGCCGGTCTGCGGTTCATCGGGCCCTCGCCGAAGGTCGTGCAGCAGATGGGAGACAAAGT
AGCCGCCAGAAAAGCTGCCATCGAAGCAAAGGTGCCGATTGTTCCCGGAACCGATGGTCC
GGTCACAACGAAAGAGGAGGCTGTGGAGTTCTGCAAAAGTCACGGTCTTCCGGTTATCTT
AAAGGCTGCGTACGGAGGCGGCGGTCGTGGTATGAGGGTGGTCCGTAAGATGGAAGAAGT
GCCTTCGGCTTTCGAACGAGCTTCTTCAGAAGCTCTCGGCGCTTTCGGCAACGGTTCCAT
GTTTATCGAACGATTCATCGAACGACCCCGGCACATCGAAGTGCAGTTGTTGGGCGACAA
AGCCGGCAACGTTGTGCATTTATACGAACGGGATTGTTCAGTACAGAGGAGACATCAGAA
AGTCGTCGAAATTGCTCCTGCACCGAAACTGGACCCTAAGATTCGTCAGAAAATGGTCGA
GTGCGCCACACATCTGGCGCGGCACGTCGGCTACGAGAACGCCGGCACGGTCGAGTTCCT
GCTCGACGACAAGGGGAACTTCTACTTCATCGAGGTCAACGCCAGATTGCAAGTAGAGCA
TACCATAACAGAAGAAGTCACAGGTATCGACCTAGTACAGTCACAGATACGTATCGCCGA
GGGGATGACCCTGCCCGAACTAGGGTTGACGCAGGATAAAATACAAGCACAGGGATACGC
GATACAATGTCGTGTTACTACCGAAGATCCGGCCAATAACTTCCAGCCCAGTACGGGCAG
GATCGAGGTGTTCAGATCCGGTGAAGGGATGGGAATCCGTCTCGACTCAGCCTCCACGTA
CGCCGGCGCCGTCATCTCTCCGTACTACGACTCTTTACTTGTCAAAGTGATCTCTCACGC
TCACGACCTACCCTCGTCGGCGGCCAAAATGAATAGAGCCCTCCGCGAGTTCCGCATCCG
AGGCGTCAAGACCAACATCCCCTTCTTACTCAACGTGCTCGAGAACCAGAAATTCCTAAA
CGGTTCGGTCGACACGTACTTCATAGACGAAAATCCGCAACTGTTCATGTTTAAAGCCTC
ACAGAACAGAGCGCAGAAGATCCTCAACTATCTTGGCTATGTGCTGGTCAACGGGCCGGC
CACTCCTCTTGCCACCAAAATACCCCCATCTGACGTCAAGCCCTACATACCTCAAGTGCC
GCTGGACCTTTCCCCAGAGGCTATTAAAAGACAGGAATTAACCGGAGAAAACACAGCCGT
CCAACCGCCGAAGGGCTACAAACAAATACTCGACGAGGGTGGCCCCGAGGCCTTCGCCAA
AGCGGTCCGGCAGCACAAGGGTCTACTCCTGATGGACACGACGTTCCGGGACGCGCACCA
GTCGCTGCTGGCCACCAGGGTGCGGACCCACGACCTGCTCGCCGTCTCGCCCTACGTAGC
GCACAACTTCAACAACCTGTACTCGCTCGAGAACTGGGGAGGAGCTACATTCGACGTGGC
CTTGAGATTCCTCCACGAGTGTCCGTGGGAGCGTCTCCACGACATGAGGCAGCTGATCCC
GAACATTCCGTTCCAGATGTTGCTCCGCGGCGCCAACGCGGTCGGTTACACCAACTATCC
CGACAACGTTGTTTTCAAGTTCTGCGACATGGCCGTCCAAGCAGGAATGGACATCTTCCG
AGTTTTCGATTCGCTGAACTACCTGCCGAACTTGGTACTGGGCATGGAGGCAGCCGCGAA
GGCAGGCGGAGTCGTCGAGGCCGCCATCTCATACACGGGCGACGTTTCGGACCCCAGCAA
AACTAAATACGACCTGAAGTATTACACGAAGCTGGCCGACGATCTGGTGAAGGCCGGAAC
TCACGTGCTCGCTATCAAAGACATGGCCGGACTGCTGAAGCCCCAGGCTGCGAAGTTGCT
GATAGGCGCCATCCGCGCGGCGCACCCGCACGTCCCGCTGCACGTGCACACGCACGACAC
GAGCGGCGCGGGCGTGGCCGCCATGCTGGCGTGCGCGGAGGCGGGCGCGGACGTGGTGGA
CGTCGCCGTGGACTCCGTGTCCGGACTCACCTCGCAGCCCAGCATGGGCGCTCTGGTGGC
TTCCTTGCAGGGCACCCCCTTGGACACTAAGATACCGCTACAAAAGGTGTCAGAGTACTC
AGCCTATTGGGAGCAAGCTCGTACCCTATACGGACCCTTCGAATGTACGGCCACAATGAA
ATCTGGCAACGCTGATGTGTACCTCAATGAGATCCCCGGAGGACAGTACACCAATCTACA
ATTCCAAGCTTTCTCCTTAGGACTGGGAAGCCAATTCGAAGAGGTCAAGAAAGCTTACAG
AGAAGCAAATCTCCTCTTGGGTGATATAATCAAAGTTACTCCATCGTCGAAGGTCGTGGG
AGATCTTGCACAGTTCATGGTACAGAACAAGCTGACGGCTGCCGATATCAACGCTAGAGC
TGAGGAGCTCTCCTTCCCGAAGTCGGTGGTGGAGTACCTGCAGGGAGCCATCGGGATACC
GTATGGAGGATTCCCTGAACCATTGAGGTCGAAAGTTCTGAAAGACATGCCGAGAATCGA
AGGACGTCCCGGAAAAGAGTTGCCTTCTCTGAACTTCGATAAACTAAAGGGTGAACTGAA
AGAATCTTTCCCAGACATAAACGACGAGGACGTGATGTCGGCGGCGATGTACCCGCAGGT
CGCGAGCGACTTCTTCCGTTTCCGGGACAAGTACGGGCCCGTCAAACATCTGGACACCAA
GACCTTCCTGGTCGGCCCCGCGGTCGGCGACACCATAGAGGTTAAGATAGAGCGCGGCAA
GACCCTGGACATCAGGACGGTGGCGGTGTCGGAGGACATGACGGCCGCGGGAGAGCGTGA
GGTCTTCTTCGAGCTTAACGGACAACTGCGGTCAGTCTTCATCAGAGACGAAAACGCCAG
CAAGGAAATGAAGATCCACCCGAAGGCGGTGAAAGGCGATAAGAATCAAGTGGGTGCCCC
GATGCCCGGAACCGTTCTCACTATCAAAGTGAAGGAAGGCGACAAAGTCGAGAAGGGGCA
GCCGATAGCCGTGCTCTCCGCTATGAAAATGGAAATGATCGTTCAAGCCCCCAAAGCTGG
TACCGTCAAGACCGTCTCGATTACAAACGGACAAAAACTAGAAGGCGACGATTTGATCTG
CACTATCGAATAACAATAATAAAAAAACAACAACAAAAACATCCGATGAGGTTAATGCTT
TAAATTAAAAAACAAATATTGAAAAATTCCTCAAACGCCACGAAACCTTATCTCCAGTAA
TATTACCTCAACTACAATTTAAGACATGAGTGTATGAAGGCATATGATGCAATTAGTTAA
TTTTTATTATAAAAAATACAATTTAATAGTTTTTTTAATTTTTAAATAAACTACTACTAA
TTGAATAAGAACTGTCTGATGAACTCATCTTTGTTTAATACTTCACTATTAAATTTTATT
GCCTTTTGTTTATTTCACTTTTACACTAAACACAATATTGCAAATTACCCGAGCACGACA
ATGTCGGAGAATTTTAGGTGCGTGAGTGACTAACGCGCATGCGCACTTATCAGTACCCAG
GGAGGAAAAGTTATACTTTCTTTCCTGTACAGCGGGACGAAAACCGAACTTTCGGCGTAG
GTAGGAGAAAAAAGTCCCTTCATCCACTCATGTCTTCAATTGTACAAGTTCATTAGTTTA
GAGCCAACGCTTAGTTATAGAGAATGTTTGATATTAAACATTCTGAATGAAAGGCATTGC
GAGCATTCTCTAAGTTTGTTGAACTATTTGGTGAACGTATAATTTTCAAAAGTGTCTGAA
TACCAACGATGGACTACTCAGCGCTTTATTTGCGAGAATCCATCATCACGTTTTATGGCT
GTTTTGTATAAAGACATCAGATGTTAACTTGTATTTATGTGCTTCGTTTTTATTTGTGCA
TATCGTCGCATAGAAGGATCTGGCAAAAGCGATCGTTTTTTTTTTTTTTTTTTTTCATTA
AATAATCCTTTAATCACATTAACTTTGCAAAATTTTAAACCATACACATTAAGGCGGCTG
TTTAC
(4625 bp)

- SilkBase 1999-2023 -