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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40935_c1_seq15
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_dicer-2_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0016442 C RISC complex
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0046872 F metal ion binding
GO:0070578 C RISC-loading complex
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:13.75 TPM:10.87
ORF EntryO_BomoMG22718_complete:A_BomoMG_comp40935_c1_seq15
Sequence
(Nucleotide)
GGAACGTGACCTAAGAAATCTCTTGAAGTTTATATTTTATTTTTTTAAGCTTAGAAAGGT
TTCGTAGTCGTACCGGCTAAGATTAAAATTAAATGCTTACTATTAAACATACTTTATGAC
AGTGCTGGTATGTAACCGAACTTCCAAATTCTGCATGCACAAGTAAAATGACTACAACAG
AAGGAATACAGTATCACGAACAGAAAGCTCGCCCCTATCAAGCAATACTGGAAGAAATAG
CAAGTTCAAAAAATACAATAATTCATTTGCCTACTGGTTCTGGAAAAACTTTTATTGCTC
AGAGGCTTATAAAAAAGTTCCGTAACCAATTAAAAAAGCCTTGGGGAGAAGGTGGGAAAC
GCAGTTTCTTTCTTGTAAACACAGTTCCGTTAGTAAATCAACAGAAAAATGTAATTGAAA
TGATGTGTCCCGTCGACGGTGTTGGTGCCTATAGTAGCGAAGATGGGGTAGACTATTGGA
AGAAAGCCGATTGGGACTCTGAATTGGCACGAAACCAGGTAATTGTAATGACCTCTCAGA
TATTAAGTGACATGCTTACACATGCATATATAAGAATCGAGGATATTAATCTGATTATAT
TTGATGAATGTCATCATGCTGTGGAAGACCATCCAATGAGAGTTATAATGAAGCACTTTT
TGAATTGTAAAGCTCACGAACAGCCCAGAGTTCTAGGTTTAACGGCGACATTATTGAATG
GGAATGTATCAATATCTAAGATCGAGGAAACACTTAAGCAGTTGGAAAACACGTTTCATG
CAACCATCGCAACTGTTGATGATCTTGGTGAAGTTATGACTTACTCTACCAACCCCCAGG
AGTTTATACAGTACTTCAGGAAGCCTCAAATGTCGGAAGCAGCTAAGGAAGCGATAAGTT
TACTTAATACGCTACAAAATCTTGTGATGAGTGTTAAGTTGCCTGTCTCTCTGCCATCAA
AAGATTTTAAAAAGACACCATGCCAACGAGATATTTCGAACGACCCTAACAAGATTGTGA
AGGCGGTAAAAAATCTTATAGTAGGAATGATAACAAATCTCGAAGAGATGGGTTTGTATG
GTGGATCTTTGGGTATTCTGGCGTACATTGTCTTGTTAGAAAGATTAAAACGTAAAGCAT
CAACAAAAGAGGAAAATTTGTTGTATTCAACTGTCATCACCCATTCCACAGAAGCTCGCA
TGATACTCTTGGACGCCATGGAAAACGAGACTGGGTACGATAAAATAATAAAACATTCAT
CGGAAAAGATTTTACAATTGATTGACTTGCTGAAGGAATATAACCCTTTGATATTGGAAA
AGCCTGGAGAATTGTTGAAAGTAAACCACTCAAGAAAACCTCTCTGTGGAATAATTTTCA
CGAAACAAAGGTTTACTTCAAAGATTCTGTATAATATCTTAATGGACTTGAAAAAAGCTA
GACCGGACGAGTTTGAATTTTTGAAACATGATTTTGTTGTCGGCTTCAGTATCAATCCTT
TTAAAAGTACAAGGGAAGAACATTATTTAAAAAAATCATCCCAAAAAGCCATTTTGGGAT
TTAATAACGGAGACCTGAACTGTTTGATATCGACGAGCGTCATCGAAGAAGGCTTGGACA
TACCTCAGTGTGCGTTAGTTGTCCGATACGATGCGCCAACCGAATATCGATCTTATATCC
AAAGCAAAGGTCGTGCAAGAAGTTCTGAAGCCAGTTTCGTTATACTCGTTGATATTGAAG
ACAAACAGTCGTTCTTAATAAAATACGACGCGTTCCAAAAAACCGAAGAACGTATTCGTA
ATCTCATAGTCGGCGATGACAGCCGCGCCGCTCCCACAACTCAAGACATTCATGAGAACT
TGTATGATGACGACGAGGTTCCCCCATACGAAACGTCTAATGGCAATATATTATATTCCG
TATCAGCAATTAGTTTACTAAGCCGGTATTGCTCGATTTTACCACACGATCAATTCACAA
CGATCACTCCGGTTTGGTTGCAAGAGGTGGTTGAAAACGGAGCTAAAAAACAGGTCACCG
TCATACTTCCCATAGGATCCCCCGTCAAAGAAGAAATTAAGGGTGACCCGTACTCAAATA
CGAAAACCGCTAAACGCTCCGCTGCACTGAAGGCGTGCATTAAGCTACATGAATTGGGCG
AACTTCATCCGTTAACATTACTCCCGTACAAATACGCGGAAGTTGATTACGAACGAGATG
ACATACGTGGCTGCTTTCCGAACTGGACTAAAGATTGCGAGACCGAGATCAAAGAGAATG
TACCCAAGCCTGGTTCCAAGAAACGAAAACGAAAGCATAAAATACAGTTCCCGTCACACC
TAGACGCAGTACCAGATAGTTCGGTATTCTATCTTCACGTAATAAAAATGGAGGCGGCAT
TCGAGAAACCCAACGATAATCGTGAAAAGGCTTTGTACGATTTTATAAAGAGAAACGAAT
GCTACGGGTTTTTGACGCAGAAGCCTTTGCCTAAACTGTGCGAGTTCCCAGCGTTCACGT
CCGTTGGAGAAATCACCACGTCAATAGAAGTCAATTACGCAGTTATAAAACTGACCCCGA
TTATATTCGAGCTAGTGAAGCAATTCCATTATTTTCTATTCGACCAAATCTTGGCGATCA
ATAAGAAGTTTCTGATATTCGAGGGAACTAAAAACTGCATGTACGTTGTCCCGGTACTGG
AACATAATGGATACAACATTGACTGGGCAACAATGCAGACTCACCACACGGTGCCACCGG
TCGCCGCGCCTTCAGTTGAGGAAAGAAAATCGCTGGTAGTCACAGAAGAAAACTACACGA
ATTGCATTGTAACGCCCTGGTATCGCGGGACTATTCTACCTGAACGGTACGTCGTGACGA
AGGTTCTCGAATACATGACGCCGAAATCTCAATTCGATGCTGACTGCTATGAATCGTATG
CAAATTATTATGCAAACAACTATAACTTGGATATATTAGGAAGTGAAAGTCAACCACTGT
TGGAGGTACGTAACATAAGCACGCGGATGAACTGCCTCCTACCCCGAGCAGCAACGCTCA
AAGCGTTCACAGACAAGCAGCTGAAGATGATATCGATTGCGTTCGGCGACGATAAACCGA
AGGGATTTGCAGAGATATTTATACCGGAATTCTGCATTAAATACGATTACCCAGGAGTAC
TGTGGTATAAGGCAACGCTACTGCCCAGTATTATTCACAGAGTTCACATGTTGTTAGTGG
CACATGAATTGCTCGTGGAAATATCAAACGCCACTAAATACGGGCAACCAATTTTGAAAA
AAACGGAATCATTTCAACCGATACAAGTGGACCGGTATATAGCCATAAATTCATTATTGT
CCCAAGTTGAAGAACCACTTCATGTCCACACTATTGACAGAATACACAAAGGCACAGATG
ATTGTTTGAAGAAAGTTGTACCGTTAAAAAAGAGCTTATATAAACTGCAAAGAAAGAAAA
TCGACAAAGAGTACCCCTGGGATCAACGAATCGAACCCATCGACGTAGAGCGTAACTTGT
CGACCATCACGTTAATGGACATAGAATGTTACGACGAGTTTGTGTCGGCTCCGATATCGT
CTGCATCGAACAACCCTTGTTCCCCGCCGAGAATCGTTCCTAAGGCCCCAGCTATAGCAC
CGCCGCCCATCAAGTACGTTGATAAAATCGAAATATTAAAGAAGACGCCGACCGGGCGAG
GTCCGGAACTGAGAGACGTGCTCGCCGCGCTCACCACGATCAACTCAAACGACACCTTCG
ATCTGGAGCGACCGGAGACACTGGGGGACTCGTTCTTGAAGTTCGCCGCCAGCCTGTACC
TGCACCACAAGTTTCCGAACATGAACGAGGGTCAACTAACGAACATCAAGGGCAAGCTGA
TCAGTAACAGGAATTTATATTACGCTGGTGCGAAATTCAACTTGGGTGGACGCATGAAGG
TGGAGCAGTTCAGCCCTAGAAGTGACTTCCTCGTCCCAGGTTTCTTTGCGCCCCCTAAAT
TGGAAGAATTTATTGAACAAAGACAAATTCGTCCAACATTCTTAATCGGCATACAGTTCA
CCGAAGAGGAAGTAATGACCGGTGAATTAAGTGAAGAAAGCTGGGAATCTGTGATGAATA
ATTTCCAAAATGGCATCGCTGAGGCAGAACCCGAAGGCTGTGCCCAAAATTCTATGCAAT
GCTATGTACATTCACAAGCAGTTGCGGACAAATCTATAGCCGATTCCGTGGAAGCTCTGA
TCGGCACATATCTACTTAGTGGAGGGATATTAGCAGCTGTAAAACTACTTGAATGGATGG
AGGTGTTTCCGCCACAGGATAACTTTGCAGACATGCTCCACAAGCCGGTGCAAACACCGT
TATCGAAGAATTTAGCTACCGAAGCTGATATTGACTTTTTACTAAACAATTCGAGAACTG
ATGTCGAAAAGATCCTAAACTACACGTTCAAAGATTCAACCTTCCTGCTAAACGCTCTGT
CTCACTCGTCGTACATCCGGAACAGGCTGACGAGCTCGTACGAGCGCCTCGAGTTCCTCG
GGGACGCCATAATCGATTTCCTGGTGACGTCACACATCTTCGAGAACTGTCGCGAACTGA
AGCCCGGCGAAATGACTGACCTGAGATCCGCCCTCGTCAATAACGTCACGTTCGCGGCCT
ACACCGTCAAACTTGGATTGCACAAGTACCTCTGCTCGGAGCTGAACCCTTCGTTGGAGA
AGGCGATAATGAAATTCGTCGAACATCAAATAGAAAGAAATCACGAGATTGAGTTCGACG
TTCTGTTACTTATCAGCGAAGTCGATTGTCAAGTCGCTGAATATGTTGATGTGCCGAAGG
TGTTGAGCGACATTTTCGAAGCATTAGTCGGCGCCGTGTACTTGGACTCGGGCGGGAATC
TGGAGACGGTGTGGTCGGTTCTGTACAAGATAATGCACGTCGAGATCGATTCGTTCTCGA
AACGCATACCGAAGCAGCCCGTCAAAATTCTATACGAAATGATACACGCTTGTCCGGTTT
TCGAAAAACAAATAGTCGTCAATCCGGACATCCCGAAGGTAATGGTGCCGGTTTCGTTCA
CGAAGAACGACCAGCGTCTCGCCGCCTACGGAGTCGGCGTCAACAAATCGCAAGCGAAGA
GGGCCGCCGCGAAATTAGCTCTCAAAATATTAGACTCTTAATTTCCAACGGAACGTTATT
CACATAGACATATAAGAAATAGACATGTTATAATATATTCGATGCCTCCAATGAACACTA
CTCTAACACAAAATTTTTTAATTTTCGTTTTTCACTCAATTTGTTTCACTATGTTAAAAG
TATTACAATTAATCATTATTGATGGGGTTAGAA
(5373 bp)

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