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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40917_c3_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_104_kDa_microneme/rhoptry_antigen_isoform_X2_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:6.23 TPM:4.92
ORF EntryO_BomoMG22337_5prime_partial:A_BomoMG_comp40917_c3_seq1
Sequence
(Nucleotide)
AAGACGAGCCCAGGAACTTTGGTCAACGAAAGGTGACGCCAGGTACTCCGGCCGGCAGGG
ACTTAGTCCGTGGGGATATCATCGCGAAGATCGACGATTATGACGCACGTGACCTTCGAC
ACGAGGACGCACAGAATCTATTCAAGAATGCTCCAAATCAGATTAAATTAGTCATACAAA
GGGGCGGTTCGAGTCCTCATCTATACTCTGTACCACGCACGACGGGCAGCTATGTAGGCC
GTGTGCCGACACCCACATTTTATCACGAGCTCGCCGAGGACGTGGAACGCGAAGGACTGA
GAGGTTCAGGCACGCCACTAGCGCCACGTTCGCCCATACCCAACGCAAGCGCCACACCAT
TCAGGACTCCAAGCCCGTTGCCTCCGTCATGGCGTGGTCCGGAATCTCTGCCTCGCAGCA
CACCGGTGCCACCTTCGCAATTCCAGCCACAACTGGACGGCGAATACAGAACCTATCTGC
TGTCGCCTTCTTCCACGCGCACCGATGAGACCATCGATGAGTCTATTCAGAGTCAGCCGT
ACCGCACCACTCCTCTCGTGCTCCCGGGAGCTAAGGTCCGAAGGGAGCCTGGCCCCACAG
AGAGTTACCTGCGTCATCACCCCAACCCAGCAATGAGGGCACCTCCTAACCACGACTACC
GTGATACCCTTATGAAACAAAAGGTGGCAGAGTCGGTGCTGCAGCGAGTGGTTGGCGAAG
AGGCACCTAAGGTGTTGCACAAGCAATTCAACTCTCCAATCAATCTATACTCGGAACAGA
ACATTGCAAACTCTATCAGGCAGCAAACTTCGCCTCTGCCAACTAACGGCCATTACGGAC
GGCCGCACGTTGTCAAGAGGCAAGTCTTTTACTAGAAACGCCACAATGCAACAGTCGACG
CACATCCTTATTGACGCATTAATGCTTTTATCAATTTATTACGCTATCTTTCGATTCTTG
CAAACTATTTATCTGTTTCACGCCAAGCTATCTGTGTCTTTTTACGAGCATGAACACGTC
GTCGATCTGTTAGCAGAAGATCTAGAACCCGCTCCGCAGACGCGCTAAAACAACGAATGC
GCTGCGGACCGGTGTTTATTTCACAAAAAAATTAATAGTTCATAAGTTTAAATTAATAAA
GTAATCGATTTATTTATCAAAAAATTAATTAAGTTTAAGACTTATTCTACATGATTAATG
TTAGTATTTTTATCGACCTGTCCTTCCTCAAACACAAACACGACTAAACGTGTAAACGCG
TGCATTAACCGCTTCCGCGCCCCCCGCTAACTAAACGTCCTGCGGTGTCGAGTCTAATGT
TTTCTGTCGTTATGATTGCGTCGCGCCCGCTAACCGACTAAATACTAACCTGCCCTCGTC
CGCGTCCGCGCCCGCCACCGCACCGCAGCCCCAGGCCGGCCGCGCAGTACGACCCCGCCA
AGTCCGAGACGTACCGCGCGCTGCAGGAGGACGGCCTGCCCGACGCCGCCACCGAACTCT
CCGCGCCCGTCGCCACCAAGGTCTTCACAGCGCCGACCAGCAAGAGGCCAGCGCCTACAC
CGAAACCGACGAAGCAGTCCGACGCGAAACCGAAAGGAAAACAAACGACCTTCGTAAATT
CACTACACGAAGAACACATTCAACAGTCGAATTCATTCAAACGCCTCATGTTCAACGTAC
TTGGGGACACCGAATTCTAAAGATGCGACGCGTGACCTCCTTCAGCGCACTAACGACTGC
TCGATGTTCCTAATTATGCGGCAATAATACCATTAACCACCATAGTGCAGTTGTAGTAGC
CTTGTCACACAACTCATGGAACTCATGTGTTGCTAGTTGACAAAAAAAAACCGGTCTTGC
CATCATCTTAAAATTTAAATAACCGGGGATAGGACGGTTACTGGAATTTTAATTAAAATA
AATAAATAAGACTAACATTTTTAATTTTAGATAAAGCTATTTTAATTGTCTTGGCAGTGT
GAAATATTTATTATTTTCGGTGGTTTTAATCGTTTCTAATACTCGAGTATTAGTGATATA
ATTTATTATTTACATTAAGTAGAAGTATGACGTTTAAAACTAAGTGTTGAGTTTTCTGTT
TTGTACAGGAAAATTACCATTATTTATGTATAATTTAAGAAATGTTGAGTGTACAGTCTA
GTCACGGCGACCAGAGCTCCGGTCGTATCTCACGAAAATATATAACGATCATTCTTAAAT
AAATTATTTTTATTTAGTTACTGTGTTATTTATTTCTGTCGTATACGGGAAATAAAAAAA
AATAAAAAAGTTTAATTTCAAAAAAAA
(2307 bp)

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