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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40916_c6_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_IIB_[Amyelois_transitella]
Ontology
GO:0001174 P transcriptional start site selection at RNA polymerase II promoter
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0017025 F TBP-class protein binding
GO:0046872 F metal ion binding
GO:0051101 P regulation of DNA binding
GO:0097550 C transcription preinitiation complex
Transcript
Level		FPKM:6.36 TPM:5.03
ORF EntryO_BomoMG22328_5prime_partial:A_BomoMG_comp40916_c6_seq1
Sequence
(Nucleotide)
TGGGGGCATATCTTTATGAGAATTCTTCTCAAGAAGAGTCATCCAGTTAGGACATATTAA
CAAACTATAACATTAAGAAAACTTACAAGATTTTTCAGACTGCTCACATACATTTTAAAG
CAATTCTAATAGTACAAAAACATGTAGTCTACATCTGTGGTAGGAATTCAATAGGAGTTG
CGAATTTGAAATCTTCAGGGAACAGTCTTGCTGCGGATGGATACATCAATTTGTAAGACT
GTCGGATCGTAACGTCCGCAACACCAGCAATATCGCCGATCTCTTTCTGACTGCGTTTGT
CTTCTGATGCCTGTGAAGCCATATAAATGGCAGCTGCAGCAACTGAAATAGGACTTCTTC
CAGACACTATGTCCAGCTCTCCAGCTTTCCTTGCGATATGTGTAGCTGCGCGTTGCACTG
AATTTGGCAGACCCAAATTCGAGCAAAACCGAGACATAAAATCTGCTGTTGTAATGAGAT
CAACTGAAGTCTCCAGTGCTTTCAGAATCAATTTGAAACACCTTCCTATTTCTTTTTTAC
TTATCTTGCTGACGGCACAGATCTCTTTAAATGTACGTGGCACACCTTCTTGACGACAAG
CAATGTAGAGGCAAGCTGAAGCTATAGCATCATTGGCACGACCCTTCAAGTTTTTACCGT
CGTGAACCTGTTTAAAAAGATTGTTTGCTCTGTCCACAATAGTTTTTGGAAGATTAATTC
TATCCGCCATTGTGTTGATTTCTCGGAATGCATTGATTAAGGCTCTATCTGTGCTGCTTA
TGTTTCTTCTATTTTGATATTTGGAAACTCCAAAGCTGTCAAATGATGCATCTCCTCGTC
CTGGCCCAATGATAGTTGACAAATCACCTCCAGATAAAAGTGGGTTTTCAGGACCACCAA
CACGAGACGGATCTACTCCAGACTTCTCATTGCTAAAAGTACGCCACTCCGAACCGACGT
CTATGACTCTGTCTCCGACCACCAAACCGCATTCAGAACATATCATATCACCCGCTCTGT
AATCCTCGATAAGGGGCGCATCAGGGTGAGCATAGCAAACCACTTTATTCGCCTCAATTC
TCGATGTACTCG
(1092 bp)

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