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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40890_c0_seq4
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		polyadenylate_binding_protein_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0008143 F poly(A) binding
GO:0022008 P neurogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.19 TPM:0.15
ORF EntryO_BomoMG22146_complete:A_BomoMG_comp40890_c0_seq4
Sequence
(Nucleotide)
GGCCTACATTGCTGTGTTGACAAAATAAGAAAGGAATTGAGAAAGAAGCATTAACAGTAC
CTAAGCTATTAAAAGTAATAGTTAAAAAATTTGTGATCTTTTATTGAATTTTATAAAATG
TATCTGAAATATATTATTTTAGTGTTTCTTGGAACGTGCATCTTCTTTGTGTCTTGTTTT
GGTGAACAGGGCACTTTTGAGAACAAACGTTGCAAGTGTGTGTGTCCGAGCCCCGCAGCT
GTCTTCAATAACACTGCTGACACAGGACGCAGTCCGTTTATCGACAATGTGCCTCCTAAT
AAATGCAACTGTGAAGGCCTAGTGCTACCCCGAATTGGAGACCAACTCAAAGATCGTGCT
CAAGAATTTTGTCCCCGTTGTCAGTGCAAATATGAGAACAGAAACATCACAATTATAAAG
GTAGTGGTGATTATTGTTATCTGGGTGATCATGTTGCTGGTGGGGTACATGGGTTTCCTG
ATTTGTTTGGATCCTCTAATCAACAAGCGAGCCATGGCATCATATCAGGAGCATACCAAT
GAGGATGATGACAACCCTATACCAGGAACGTCTCAGACGATGGGTGCAACTCCCCGCGGG
AATGTTTTGAACCGGGTTACCCATCAGCAGGACAAGTGGAAGCGTCAGGTCCGTGAGCAG
CGTCGCAACATTTATGATAGACACACTATGTTGAACTAGCTCATGACCAAACTCAACTCC
TCAGACCATGAATGATAATGAGAATGTACTGTTCGAATACAGAGATTGACAGGCATGTGT
ATTGTACAAACAATGCTGATAGAATGCAATATAAATAAGAATGGGAATTTCAAAGGCTCC
CCTAAATTCTCATTTCATAATTGCAAGATACGACTAAGAACCACAAGAAGATAAAATATT
CAATTTAAAGTATTGTTTCAATTGTTATTTTTGTTATAATACACTGGATTCGGTGTTATT
CACAGCTTTGTCACATTCGTCCAGAATGTGTACATAAAAATAGAGCATAACAATTTGAGC
TGTTACTGTTGTTATCAGGATACCTTTTGCATAGTTGAAGCTGTACAGCTTCCTCTGTGT
GTTAACATCGCGTTAATATTTAAATTATTTGGAGTTGAGTCATTATGGCCCCATTTTGAT
TAGCAATGAATTATTATGTTAAGCAAAACATCATCTATATTATTTGATCATAAACTCAGA
ATTGGTGACATAAACATTGTCTAATTGACGACGGTCATGAGTTACCATTAGCTGATAGAC
ATACAATAAATTGCTTGTTTAACATTCTAAGGCAGGGGTGGGCAACGCGGCGCTCGCGGG
CGTATTTTAATGCGCCTTCGCTGGACTAATGTGAATGTATGAGAGCCAGAGCGATTTACT
TACTCTTGTCAAACGGCGATATACAGCAAGTAGTCAGTTGAGTTTAGGATTGTGCATAGA
TTAACAGTTTGCTAACTTTAAACGTATCTAATAACACGCACGTATTTTTTTGTTAGTGTG
TGATCGTATTTCGAATAGATCACGGGTTGACAAAATCTATTTTTTTTAATGCCTATTTAT
ACCTATTGATTATCTGTAAAATGTGCGCCCTCGGTGATTTTCAAATTTAGTATTGCGCCC
TTGAGGACAAACAGATTGCCGACCCCTGAACGCCGGCATTTATGAGCCAAGACTACAAAA
TAAAATCCGTTGCGTGCGGTGCGTCTGGCGCTGGTCAATGGACGCGTACCTCAAGATGAC
GTCTGTTGCAAGAGGGGCGCGGTGTGCGTGTGCGGGGGGGTGTGCGGTCGCGCGCGCGTT
GTTCAGTAGGGAACGTACCTGCCGCGTCGCGGGGGCCGGAAGCCCGTGTAGTAAGGCGCG
AGGCCGCCGCGGTAGCCGCGCCCGCGCCCGCGCATCGTGCGCGGCGGGCGGTTCGTAGAC
GACAGACCCGGCTTGTTCGTACGCTTCGGCATCACCTTTATTTGCCTTCCTCTAAATAAT
GATTCATCCATAGCCATTGCAGTCTGGACACTATCCTTGTCGCCAAATTCGATGTAGGCA
AAACCTTTTGGGTGGCCATCATACTTATTGCATAATATTGTAACCCTGTTAATAGATCCA
CAACCATGAAAGTGCTGCTCCAGCTCCTCAGCCGTGGCTCCATAATCAACATTACCAACA
TATACTGATCTATTGTCTGCTTCTATTTTTTCTTCGATAGACATGTTTAATGGACTGGTT
AGTCCTGGTGGGCTTCCCATACTCATTTGCTTGTCAACTTCAGTCTGCATTTGTTTCAGT
TTCTCAGCTTCTTCTTCCATCTCCCGCACTCGGGCCTTGATAGCTGCAAGGTCAGGAGCT
TCTCCGCCGGCCGCTTCATCTCCGCCTCCGAGACTATTGTCAGTCATATTCATTGAGCCG
TTAGTTCCTTCCAAATGATTGTTGTCAATCGAGTCTAAAAAATCATCATTTTCTGCCATT
TCCACCGAGCGTCGAAATCATGAATTATATATTTCGAGATCACTTTACTTCTCTGAAACG
GTAACCAAATCCACTATGAAATCGTTGACCTACTCAGGTAATACAGTTCATAACAACAAA
TAGGACAGTTTTCAAATTACAGTCAGTATTCGAATTACATAAAATAACAATTTGATGCAA
GATATTTACGGATTCATTCTAAAATGCTAATGTATAGCTATTCGGTTAGATCCAAACATT
AAA
(2703 bp)

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