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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40890_c0_seq3
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		polyadenylate_binding_protein_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0008143 F poly(A) binding
GO:0022008 P neurogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:1.18 TPM:0.93
ORF EntryO_BomoMG22144_complete:A_BomoMG_comp40890_c0_seq3
Sequence
(Nucleotide)
GGCCTACATTGCTGTGTTGACAAAATAAGAAAGGAATTGAGAAAGAAGCATTAACAGTAC
CTAAGCTATTAAAAGTAATAGTTAAAAAATTTGTGATCTTTTATTGAATTTTATAAAATG
TATCTGAAATATATTATTTTAGTGTTTCTTGGAACGTGCATCTTCTTTGTGTCTGGCACT
TTTGAGAACAAACGTTGCAAGTGTGTGTGTCCGAGCCCCGCAGCTGTCTTCAATAACACT
GCTGACACAGGACGCAGTCCGTTTATCGACAATGTGCCTCCTAATAAATGCAACTGTGAA
GGCCTAGTGCTACCCCGAATTGGAGACCAACTCAAAGATCGTGCTCAAGAATTTTGTCCC
CGTTGTCAGTGCAAATATGAGAACAGAAACATCACAATTATAAAGGTAGTGGTGATTATT
GTTATCTGGGTGATCATGTTGCTGGTGGGGTACATGGGTTTCCTGATTTGTTTGGATCCT
CTAATCAACAAGCGAGCCATGGCATCATATCAGGAGCATACCAATGAGGATGATGACAAC
CCTATACCAGGAACGTCTCAGACGATGGGTGCAACTCCCCGCGGGAATGTTTTGAACCGG
GTTACCCATCAGCAGGACAAGTGGAAGCGTCAGGTCCGTGAGCAGCGTCGCAACATTTAT
GATAGACACACTATGTTGAACTAGCTCATGACCAAACTCAACTCCTCAGACCATGAATGA
TAATGAGAATGTACTGTTCGAATACAGAGATTGACAGGCATGTGTATTGTACAAACAATG
CTGATAGAATGCAATATAAATAAGAATGGGAATTTCAAAGGCTCCCCTAAATTCTCATTT
CATAATTGCAAGATACGACTAAGAACCACAAGAAGATAAAATATTCAATTTAAAGTATTG
TTTCAATTGTTATTTTTGTTATAATACACTGGATTCGGTGTTATTCACAGCTTTGTCACA
TTCGTCCAGAATGTGTACATAAAAATAGAGCATAACAATTTGAGCTGTTACTGTTGTTAT
CAGGATACCTTTTGCATAGTTGAAGCTGTACAGCTTCCTCTGTGTGTTAACATCGCGTTA
ATATTTAAATTATTTGGAGTTGAGTCATTATGGCCCCATTTTGATTAGCAATGAATTATT
ATGTTAAGCAAAACATCATCTATATTATTTGATCATAAACTCAGAATTGGTGACATAAAC
ATTGTCTAATTGACGACGGTCATGAGTTACCATTAGCTGATAGACATACAATAAATTGCT
TGTTTAACATTCTAAGGCAGGGGTGGGCAACGCGGCGCTCGCGGGCGTATTTTAATGCGC
CTTCGCTGGACTAATGTGAATGTATGAGAGCCAGAGCGATTTACTTACTCTTGTCAAACG
GCGATATACAGCAAGTAGTCAGTTGAGTTTAGGATTGTGCATAGATTAGCAGTTTGCTAA
CCTTGAGCGTATTTAATAACACGCACGTATGTTTTGTTAGTGTGCGATCGTATTTCGAAT
AGACCACGCGTAGACCGGGCATTTAAAACTACTACTATACAGTTAGATAATTGTTTAAGG
ACCGGAAACTCTAAATATATCCCCAATTATAAGAAATTAGCTGAAAATATGGACACCCAA
GTTTCACACTGAATTATATGTATCATTATGTATGACACCAACAAAATAAAGTTATAAAAA
ATCTGTTTTTAATGCCTATTGATACCTGTTGATTATCTGTAAAATATGCGCCCTCGGTGA
TTTTCAAATTTAGTATTGCGCCCTTGAGGACAAACAGATTGCCGACCCCTGAACGCCGGC
ATTTATGAGCCAAGACTACAAAATAAAATCCGTTGCGTGCGGTGCGTCTGGCGCTGGTCA
ATGGACGCGTACCTCAAGATGACGTCTGTTGCAAGAGGGGCGCGGTGTGCGTGTGCGGGG
GGGTGTGCGGTCGCGCGCGCGTTGTTCAGTAGGGAACGTACCTGCCGCGTCGCGGGGGCC
GGAAGCCCGTGTAGTAAGGCGCGAGGCCGCCGCGGTAGCCGCGCCCGCGCCCGCGCATCG
TGCGCGGCGGGCGGTTCGTAGACGACAGACCCGGCTTGTTCGTACGCTTCGGCATCACCT
TTATTTGCCTTCCTCTAAATAATGATTCATCCATAGCCATTGCAGTCTGGACACTATCCT
TGTCGCCAAATTCGATGTAGGCAAAACCTTTTGGGTGGCCATCATACTTATTGCATAATA
TTGTAACCCTGTTAATAGATCCACAACCATGAAAGTGCTGCTCCAGCTCCTCAGCCGTGG
CTCCATAATCAACATTACCAACATATACTGATCTATTGTCTGCTTCTATTTTTTCTTCGA
TAGACATGTTTAATGGACTGGTTAGTCCTGGTGGGCTTCCCATACTCATTTGCTTGTCAA
CTTCAGTCTGCATTTGTTTCAGTTTCTCAGCTTCTTCTTCCATCTCCCGCACTCGGGCCT
TGATAGCTGCAAGGTCAGGAGCTTCTCCGCCGGCCGCTTCATCTCCGCCTCCGAGACTAT
TGTCAGTCATATTCATTGAGCCGTTAGTTCCTTCCAAATGATTGTTGTCAATCGAGTCTA
AAAAATCATCATTTTCTGCCATTTCCACCGAGCGTCGAAATCATGAATTATATATTTCGA
GATCACTTTACTTCTCTGAAACGGTAACCAAATCCACTATGAAATCGTTGACCTACTCAG
GTAATACAGTTCATAACAACAAATAGGACAGTTTTCAAATTACAGTCAGTATTCGAATTA
CATAAAATAACAATTTGATGCAAGATATTTACGGATTCATTCTAAAATGCTAATGTATAG
CTATTCGGTTAGATCCAAACATTAAA
(2846 bp)

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