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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40884_c2_seq36
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_chondroitin_sulfate_synthase_1_[Bombyx_mori]
Ontology
GO:0002063 P chondrocyte development
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0009954 P proximal/distal pattern formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030279 P negative regulation of ossification
GO:0031667 P response to nutrient levels
GO:0032580 C Golgi cisterna membrane
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
GO:0051216 P cartilage development
GO:0051923 P sulfation
GO:0060349 P bone morphogenesis
Transcript
Level		FPKM:5.00 TPM:3.95
ORF EntryO_BomoMG22062_complete:A_BomoMG_comp40884_c2_seq36
Sequence
(Nucleotide)
AAAAACTCGCACTAAGCACACTGAGCGCAAATTCTTGTCTGTTCATTTTCAACGCAGTGT
GACGTAAAAATTAATGAAACATTAATTTTGAAACATGATTTTTAGTTACATCTTCGCTTT
CGGTTAGACTTCATTAAAACATTCCCTGTAAAAGACCTATATTATGCAAAAATGTAGCAC
TCTCTCCCGCTACTGTTATTCATCACAGCGACGACTAATACATGAGAGTCGGAAAGCCTG
AGAGGAAAAGTAGTTTCCGTATCGAGAACTCGATACATTTACATTACGAATTCGATAAAT
TTTCGGGCTTGATCTATAGTTTTTCTCTCGTAATGAGGTCGCATAGCATTGTCTATAAAT
TGTTTAAGTGGAACTTTTCCGGGCAGAGCGTTCATGGCCGTATTCCAAACGATTAGTCAG
TACTCTTACATGAGAATTACAAAAATCAAATCTCCAATTTTTATATCAAACAAAATAAAT
CACATCATAACTGATGAGCTGGAAAGATACATTGTTTATTGACTTCGTCGAGCATGATCG
AATTAGTCATCGTGTATCATAAGAATATCCTCCTCCTCGCGTCGTTTCCTCACTGCTGAG
GGTCGTGACCATTATAATTCGACATGATTTTACTCCTTGTGATGTCCCGCCAGCGCCTCC
GATCATTGGCCGCATGAAGGGCGTCATAAGAATATCAACAGTGCTAATTTTCAACAGGCA
TAGCTTCGGCCTTCAATATTTCCTAAGCATTTATATAAATCGCCTTGCTGATTTGAAATA
GCTTTAAATTTATGTTTCTATACAAAAGCATATAAAAAGATAATTACGAACCCGTCACTT
ATATATACATTTTAACTGTAAACAACTGATCATATTTACATGTGAAGTATATTTTACACA
ACAAGCGGAGCGGACAATATCCGTGACCAACCAGCTGGGGATGTATTGGAAAATTCGCGT
CTTGTCGAATTCAAACAGCCTAATGAACAAACTTGAACGTTTGACCGGACTGTTTTTATA
TTGACGCCTTCACGAAACATCGAAGAACACATGATTCGTTGTAAGCTAGGACTGCGGAGA
CGCCGGGCGGAGGCGTGTCAACAGCACAGGGGGCAAAGCGCCCGTTGGAGGAAAAAATAT
CCGTTTTTATTTACTTTAATTTAATTCTTATACAACACAATTGAAACTTCAAAATAAACA
GTAACGAGACGTTCATTAATAAGGCCATAAAAGTTATATTTGTGTGTTTCAAAGCGAGTT
AAAATTTCAGAAAGAACAGGATGAAAAATTTTAAGATTCCATTGAAATTTGATTTTATTA
ATTCAGGAAGTCCCACCGGTCTCGTATTGAAAGGAGTTCGAATAAACGTATCCACCGGTA
ATAAAAAAATATAATAAATAAATAGGAGTGATAAAAAATTAGAAATTGGTTTTACTAGAT
AAAGCATTTTGTTTCACGAATTTTGCTAGATTTTTTTAGAAATATGTTTTTTTTAAAATA
ATTCTATACCATCGAACGTGTGAGGTGAGTCTTGTCACCCCCTTCCCTCTACGACATAAC
AGATTATATTAAAAACGTAATAAAATTCCAAAAGTTTTTAACATAATTTTCAAAGTGAAT
TAAATTAGCTCATTCAGTTATTTTCTCCAAACTCAGAGGTCTACTTGTAAAACCGAATTT
ATAAAAAGTTCACAGGATTTGTCAAAATTCGTTTTGATGTCTATATTACAAAAAGAAGCC
CTCATAAACAAAACTTACATTCGTGAATTCCAGAAATAACCAAAACATATTACAAATTTG
CATTTCATGAAGAAAAAAAAACAGCTGTCATAGAATAAGGCACATGAATAACAATTAATT
GACGCTGTGACTTAGTAAATATTTATAGAGAAATAAATTCCTAGCGAGTCATTATGAATT
AGGATATTTTACAGTAACTCTAACAGCACTATACTTAAAGATACATAGTTATATAAAGGT
CCAGAATTCCTGACGAAATAATAGTTGTAACTTTGATGTATTTAGAAATCCAATTATCAA
AAAGTCAACGTGAAAGTTTATGGCCTCTGCTACGGCTATTATTTCAACTGAAAAACGATT
TTGATTACATAATTGCTTGTTTTGTTTTGAGTTTTGAATGGCATACCTGTCTAACTAGCT
TACGTATGATGTGGTATCCGATTTGCTAGTAAACTAGGATCCCATTTATATAGCACACAA
AGAGTCCCCTCAAAACTATTATAAATACCTAAGTTTGACTGCACCTAACCTAAGCGACCC
TGTACTACCTGGCACCTTTCTCGTTCTTTTCCTTAGGTTTCTCTTCCACCACTTCCGCTT
CCGCTTCCGGTTTATCTTGTGGCGGCCACAGGACATCAGGGTGGTTTAGCATATAATACG
CCATGTGCTTTTCACTGCCGTAAGTCGATGCCTTCGTTCCCAGACACATCTTGAACTGGC
TCTTCTCTAAATTTTTATCACAGTCAACCGAATGGAATATATGGACTAGAGTCTCGTCAG
CTATCCTGTATACCGTTAAATTTGATTTAATTAGCGTTTCAAACAGCTGCACGTCTTCTA
GACCCCAACCCTTAATGTTCAAATCGAATCCCCCTATCCGTTCGAAGTCACGTTTATAAA
TAGCTAAAATACCAAAACCGTACTGCCTGAAATAGCCCGTATCATCAGTTATTTCCCGGC
TGTACTTCAAATTCGCCAATTCTCTGTCCGTTCTCACTGTTTCTTCGTCATCAATAAACT
TCTCCAATTCAGTGTCCACAAACAGAGTTTCGCCTTTAACTTTATTATAATCATCACCGT
TCACTACATCTGGATTGTACTCACTAAACACTATTGGGAAATAAACTTGGTTATATTTTA
TTGTGTTGATTCTTATTCGACGAAGGCTCTCGTGGTTGAACATCATGTCCACGTCAATGA
AGAAGACAAGGTCGTCGCTATCGCAGAGCTTGAGTCCCTCGGTCAAGGCGGCTCCCCGTG
AAAACATATTCGACCCCATTTTAACTATTTGGATGTCTTTCCCGTACATCTCGATATAAT
AATTAATTAGTAACTCTGTGTTTCTATAATCCAATGGATGTTTGCTATCTAAATAAGCTA
CGACAATTAGAGAGGCAGCTTGACTGCTTTTTAAAACTATATCTTCGTAGTTCTTCATGA
ATCTACCGAATGTCTCTTGTCTACCAGATAGGGGCAGAACGAAGTGTATTTTTCTGTCAT
ACACCGGGTACTCTTCAGAATCATCACTATTCCACTTCAACACCTTGGGTAAGTTGTTCT
GGATCTTCTGAAGACCAGTTTCGAGAGCTTCCTTGACTTTTAATTTACCGAAGTCCAAAA
AGCTGCTCTGTTGAGCACTGGACTCGTCAAAGTCCTCGTAGTCGTTCGGATATAATCCAT
TCTCAGTCTTTTCTAGTATGGCTGGATCTTCAAATGGAGGCGGATCTCCCATTGGTAACT
CTCTTATCTCCATACCTGTAAATGACTGCTGCAAATAAGCATGTCGTCTAACTGCCGCTG
TCATTTTCCTTCCTCTGTATCTCCTGTACTTCAACAGCAGATCCAAGATGTGATCGGCCC
CGTGCACCGGCTGGAGCCTGGTGTATCCGTACAGAAGCTCGTTGAAGTCAATCACACGTC
CTCGTTGACGAGACGGTGCATTAATAATCTCCATAACTTCTCTGATAACATCATCCATAG
CTTCTTTCAGGGGTAGCTCCACTCGTCTTTTCGGGTTTGAGTGGTAGGCGGAGTACAGGC
TCTTGCTGATGAAGTCGAATATGACGATATCGTCTAGATTGGAGGGCTTGTACCGATTCA
TGTCTATCGGGGCACCTAATATTTTATTATCCCCCAAGTATCCTGGCTCCCCAATCTTGG
CCGGGAACAGCGGGACGTCTCCGGGTAAGACAAAGTCATCGACCTCGTCCCGGGGAATAG
AGAGCTCCCGAAGCGCCGAGGAGATGTCCCGGTGGAGATCCAGGGAACGTTCGCGAAGTT
CTTGGATACGAAAGTTCTTGAAATATGAATGTATTCTGTACATCTGGCGATGGTCTTTCA
CCGGATGCAAGGTGATGGCTCGGTGCACCTCTCTGGCTTTCAACCGACCGGTGTAGGCAG
CCTCGCCGCTGCCATTGTGATGGAGAATCGTTTGCATATCATAACTCCAAGTACAGGATA
CACCGGCAAACTTGGCGACACAGCGACCCAGCTCCACGTCCTCGTGAGTGGAGTACAGGT
GCTTCAAGCAGTACTTCACGTGAGGGGCCACTCTCCGCAGGGTCTCACGAGAAATCAGTA
CACCAGGACCACCCATACAGAAGTTCTCATTATAGTCCAAAGCTAGCACATCTTTTTCAT
CGTTGGTTCCCCTACCAGCTTGCCCTATGAACTGAGGCTTGCGGCTGTCCACCGAACGCA
GGAATTCCTCTAATTTATCACCTCTTACGTATACATCATCGTCCGCTCTCATGAACCACT
CGAATTTCTCCCCATACTTTTCGTACATGTGCAACAACATGAGGAAAGATTTTTTCTGAG
GAGGATAACTGTCGTCTACGTTGCGCAGCGGCACGAGGGGCAAACCCGGGGCCCGAGACA
CTTCTGAACTGAAAAACGCGATACGCCCCGGCAGGTCCTGGGCCCAGGTGTCGTACACTG
CCCTCGCTCTCGTCGTCAAATATTGTTCGGCCGTCATCACACCGACAAACACTAGAGTTC
TGTTTGAATTATGAACAGTCTCGTTCGGGTTGAGACCTATTAAGGCTAGCGGTTCCGGGT
CCGCATACGAGCGGGCCGACTCCGGACAAGCCTCTATGCTCGTCCGCGAGGAAGTCCTCA
AACACAGCTTGAGAAACACTCCGAACACGACGCCGGCCACGAGCCCAGTCACCATGTGCA
TCCACCTACTTCTTCGAGGCATCATGGCGGTACTGCAGAATCAACACTAGCAACCACGAT
CACCCGGCGTCCACATGTGTACGTTCCAGGAATAACGTTTTTATCCCTTTTTTGTATCGT
CCGGGAGGGGTAGACATCAGCGGGCTGCTTTTTTGTTCGGTTGTCGCTCCCGTCGGGCGG
GGAGCGCTCACATGGCCGCGCACGTCGCCGGCAGACCGTCGCGCAACTCGAAATCGAACT
CTATCGCGATATCGCCGGCCTAAATATCAGATTTTGCAGATGTTATCGGTGCGAGCGCGG
CGAGGCGCGGCGCCTGCGGTAATGCGACTCGTGCATGCTCCGCGTCGCAGCGAGTCACCG
AGCCGGGCAGCTGTTATCGCGCGAGAGCAGTTCGACTCGTGCG
(5323 bp)

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