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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40880_c7_seq13
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_protein_Gawky_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000932 C P-body
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0031047 P gene silencing by RNA
GO:0032880 P regulation of protein localization
GO:0035195 P gene silencing by miRNA
GO:0045475 P locomotor rhythm
Transcript
Level		FPKM:3.69 TPM:2.92
ORF EntryO_BomoMG21992_5prime_partial:A_BomoMG_comp40880_c7_seq13
Sequence
(Nucleotide)
CGTTAATTTTATAAAAATTACAAACTAATTATACATCTTTGTTAATCTGTGAAATGCACT
TGCGTTTTTATTGCTGCGTAAATATCACTAATGGAAAACGAAAGCTCGACGCCCACGGTG
AGGATTCAAAACTAAAATTAAACAGTTTAAAACACGACGTATATAAATTAAAAAAAAAAA
AAAAACGAATACTAAAAATTAAAAAAAAAAAACGAACACGAACAAATCTCGGAACGCGAT
CGCCCGACGGACAAAACAGCAACAGCCCTCGAGCGCAACAAAATAAATATGAGGAAACGG
AGGCGCTGACTCACCTCCGCAAACGAGAGTCTTAACTCTATCCGAGGAACCAAGCCGACT
CGATTTAGATGGACTCTCCGCCGAGCAGGTCCGGCGGCAGGAACGAGTTGAGGCTGGAGG
GCGTCGCCCGCTGGTCGTGCTGGTCGGGCCACAGCGAGTTGTACCCTGCCCATTCCTTGG
TCTGACCGCCGCCGCGCCAGGCACCGCCGCCGCCCGAACCCAGGTGCTGCAGGATCAGCT
GCACCTCCGACTCCGCGGGAGACTCCGCGAATATCGTCGTGTTAGACAACACGCAATTGT
TCAGTGCCATCTGAGCCTTGGCAGCTTCTTCGCGAGTGGAATAGCGAGCTAAAGCCAACC
CCTGGTTTAAGTACAAGTGAAAGTTCAGAAGAGGTCCATGCTGCACGCACAGGGTCTTGA
GTGTGGAACCATCAATCTGAGCTGTGAGGTTCTTGAGAAGGAGCCAAGTGGAAGCCTGCC
AAGACGGGATCGGATGGCGCGGCTGGGGCCACGGCTTGTTCAGACCGGGCGGTGCGGCGC
GAGGCTTGCCGGCCCACGCGTCCTTGCCGGCGGCAGCGCTCGGCGCGTAGCTCCACGTAG
ACGAGGAGAGGCTGCGCTCAGCGCCGGGCGGGGAACTCTTGCCTCCTAGCATGTCGGTAT
CCTTGATGGCAGTCAGCGACAATGGTGATCGGACGACTGAACCGGGTGTCATCGCAGGGT
CTTCTTCGACGCTCTTCATCTGATTACCCTTCCAAGGTTTTCCAGGTTCAAACTCAGGTA
CAAGATCAAAGACAGGCTGGTGGGACGTATGGGTGGGCCAATCTTTTCCGTCGGCCACAT
CAGAAGTAGTGTCGCCCCAGCCCTCAGAGCCACGACCTACTCCCCATGTCGAATCAGGCT
GCAATCCTAGCTGGTTAAGTTGAGGACTTGTAGCAGACTTGGCAGTACCGGGGGCACGGC
TAAATTCCGAGCCTTCACCTTCCTTGTCAAGAGAAGGCAACTTCCACTGAGTTAGGCGAG
ACTGCTGATTTCCACTTCCACCAAAAGACGGTTGTGTATCTTTCGTGATGGATATTTCAT
TAAAATTGCTCTGTAATGGACCAAGTGGGTCATGACCCTGCTTGAACAAGTCTGCGCCTC
CACTTTGCTGCTTCATGTACAACGCTTGCTGTGTTGCTATTTGGTTTTGTAGCCCAGTTA
TCTGCTGCTTCGCTTTAGTAATTTGTACAGAGTATTGTAGGGCTACTGAAGAGTGCCCTT
TCGCCATAGCCAATGAGTTTTGCTGTAAAAGCTGCTGAAGTACTTTTATCTGTTGTAGAA
GTTGGTTTAGTAAAACGAGGGTTTGAGGCGCCAGTGGTTGATTCAATATTTGATGATTGA
GGTAGCCAGCAGAGACAGCCATTTGTATTTGTTGGACTAGCATGCGGAGCTGAGCAGCAC
TTGGCTGCCCACTATTACCCGTACCACTGGTGGGATATTGTTGATGGTGCACTGGCTGCG
GTGGAGGTTGGTTGAGCAGTTTCTGTACAACAGCAGGCGATACCGCGGGAACGGAAGGAG
GTTGAAATCCACCTCCAGGATGAAAATGTTCATCGCGTCGCCAACCATCACCTCGTGCGC
CTGCTAACAGTTCTAGCGCTTCTTCAGCGTTCATGTCGCGACTACGCAAGGCTACTTCTG
CCTCTTCCTTTTTAAAACCCATTTCCACCAGAAATCTGAATTGCTTGCTATTCCAAATGA
CTTCTTTTGGAAGCTGTTTGGCTAGGGACCCTTGAGGTGGTTTGGGCCCACCCCACTCTC
CAATATCGTCAGGCCAGCCACCTGCAGGGCCGGACGGTTTCGGTTTGGGCACGGGCCATA
ATCCCGGGCCAGATGCATCCGGCCAAGCTGGCCCATCTCGGTCGGGCCACGCCGGAGCGT
GCGGCTCTTCCCAAGAACCATTTCGCTGAGAGTGAGAGCCCCACACCGCATCAGGTTTAG
TGGGCGTAGGCGGTATCCGAGACTGGGTGGGCGGTCCCTGTGGGCCTCCACGACCCATAC
TCATTCCAGTTCGTTGAGCCCACAACGCCGTACCGTCATCAAATCCACTGCCAGTGCGCC
GCACCGCTGGTGGCGAAGGTTCTTCCCATCCACTCGATTTGATAGAGTCCTGTGTTCCCC
ATTGACTGACACCACTGCCTGGCATCATCTTGCTCGGTCCTGTATGTTGATGCTGGCTCC
ACATATCAGTGTTGAGTCTACCCGAAATACCACCACGCAGATCATGACGAGGATCCACGG
GCTGCTGCCGAGGGTCGGAGCCTCTGTGTGGATCCAATCTTGGATCTGCTCCTCTATGAG
GTTCACCCCAAGCATTCCAATCATCTTTCTTTGGCATGCCCCATTGCTGAGAATGTTGTG
GTGGACCAGCTGGCCACTGTTGTGGTGGTGGAGGCCCAGTCCACACATTAGCAGAATCAG
AAACATCATCATCTTCTCCCCAGGTGCCACCAATATTAGTCGTCGGAGTATGACCCCAAG
GTGTCTTAGAAGCGGGTTGTGGAGGTGGTTGTCCACCATTTCTCAAATTAGCTTCCCACA
GATCAGTTCCAAGGAAAGCACCATTATTAACATTGGGTTTCCATGCAGGAGGTCCTCCTG
CTGCTGTCGGTTCAACTTTTGCACCGGGTTCAGGTGAACCGGGGACATCCCAATTAGTGT
CTTGATTAACATGTTGACCTCCCCAACCGTCTTGACTAAATAATGCCTCTCTCATTGAAT
TTAACTGTTCAATTTTGGCTGATGAAGTGCTGTTGTTGTTACCATTGGTCCCATTGCCAG
CAGCTGAACCATTCACACCCCCATTAGCATTATTAATTCCATTATTTCCATTAGTTGTAT
TATTTGTACCATTACTAGCAGGTGCTCCATTATTGTTAGGTTGTGAATTCGGCAGGTTTG
GTGGAGAATTTTGCCAATTTTGTGCAGATGCAGCACTGGTTGGTGGCAATTGGTTTCCAT
TGCCCTTGTTGCTGTTCAAATCAGCTTGAGAAGTAGGCGGACGTTGAGCTGTATTATTCC
ATTGCTGAGTATTGTTTGTTCCGTTATTTGTTTGACCACTGGTGCTACCACCCCAGTTAC
CAGCTGCATTATTATTGGCTGTTGGAGGACTACCCCAGCCACTGCCAGCATTAAGGGAAC
TTTCACCTCCACCACAAAGCCTAAGACGATATGGGTTCCCCCAACTATCCAGATCTGAGC
TTTTCATAGTATTTATAATTTTCTTCTCGTTATTTGCTAATTCTATCATAGCTTCAAAGG
TGAGATCACCATTTGTAAATGTCTTTACGTGTGGCACAAGGGCCAATTCATCATGAAGTT
TCGATACATTATTGTCATGGTGCGTTCTCAGAGACATTTCTGTGTCACTGATCATTCGAG
TTTTCGTTTTGCACATTATATCATGAGCAGACTTATCATTCAGTAGTTGCATCTCACAAG
ACTCATGTTGTATAATACAAACTGAGGATTTAAAAGCGTAATCAGACTTGTTCATATACT
CTGGCGCTCGAAACGCCATCTTATACTTTAAGTTAAAGCTACTGAAATACGGGTCACTGT
ATGAG
(3905 bp)

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