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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40874_c4_seq20
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_Niemann-Pick_C1_protein-like_[Papilio_polytes]
Ontology
GO:0001618 F virus receptor activity
GO:0004872 F signaling receptor activity
GO:0004888 F transmembrane signaling receptor activity
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0006897 P endocytosis
GO:0006914 P autophagy
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0007628 P adult walking behavior
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015248 F sterol transporter activity
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016242 P negative regulation of macroautophagy
GO:0030301 P cholesterol transport
GO:0031579 P membrane raft organization
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042632 P cholesterol homeostasis
GO:0045121 C membrane raft
GO:0046686 P response to cadmium ion
GO:0046718 P viral entry into host cell
GO:0048471 C perinuclear region of cytoplasm
GO:0060548 P negative regulation of cell death
GO:0070062 C extracellular exosome
GO:0071383 P cellular response to steroid hormone stimulus
GO:0071404 P cellular response to low-density lipoprotein particle stimulus
GO:0090150 P establishment of protein localization to membrane
GO:2000189 P cholesterol homeostasis
Transcript
Level		FPKM:198.71 TPM:157.00
ORF EntryO_BomoMG21953_complete:A_BomoMG_comp40874_c4_seq20
Sequence
(Nucleotide)
TCTAAAGTCTCAGTATAGTTACAATACATATTTATAATTACTTTTTTTTAAATGCACCTT
TTTTTGAAGTGAAACTTCTTTAAGCGCAATAAGGGTAAAATTTTACTCGTGACAGATTCG
TTACGGCTAGAGAGAAAAGATACAATTTAGGAAGAGCGAGAGTGAGAAAATAGACAGAGC
GTCTCGCGAACCATTCGGTTCTGAAGAGAGGGAAAGGACAAAGCGAGTTAAGATGTTTCT
TTTATACACAGTATTCGCTATTACAAGTTAAATTTGATATAAGGATGAAACATGAACAAA
ACCACAATACTACATACCGCAAAAGAAGTTTCACTTCTTTCACGTGCACCAAGTTGCGCG
TTCACATTTTTTTTATTATTGAGACAACTCGCCTCTATGTTTTCTATACCTACTTCTCCT
GTACATCATGAAGAGAGCCTTTGTGTAATGTTCAGTTTTCTAGTTTCAATAGCTTGGGTT
GGATATTTATCAGTGAGTCAGTTATGAGCGAGTCCCACAAGTCGGTTAATATTGACTTTC
ATAGAATCGAATTTTTTACGTACCACATTGTTCTTCTCCCTAAATTATTAAAGAACTATA
TGCTTATAGCCATTAGCTTTTATATAATAAGTACATGTTACTGGTAGTTGATTTTGGTTT
GTTAATTAATCTTTATTTTTGTAAATTGCAAATTAATAAATAAATAAAAATTAGACAATA
ACGAGATTAAATAAATAAAATTCCGAATTTATCTGATCTTATTTTTTTGATAAATCCTGT
TTATGCTATTTTCGTTTTTTAAATTATATCATTGTTTTCTTAACTACATCATCTTTGGGC
ATAAGTCTCCCTTTTTTACCCCATAATCTTCGATCGTCCGCCAGTCTCATCCACGACTTA
ATACATAATAAATAATAATTTAAAAATTTGAAAATATTATCTTAGTGTTTTAAGTTAACG
TATCTTTATTCTAAAATTTCTAATCACCGATTAATATACCTTTAATCACACACCTGCATG
TTTAACTGATAGATATCGATAGCGTTACGATATCGTTTAGATTAATTTGTCCGTCGTTCC
TTATGGTCTTTCACTCGTGAAATAGGGCCGCCGTGAGCCGATTGTCTGTTATTACTTAAA
TATGCAAAAGTAGCACCGTATTTACGTATAAAATGAATTTTTTTATAACGCTCGTTCTTG
TGTTTTTGTATACAAGCGATGTGAAGGCGAAATGTCGATTTCGCGGTGAGTGCATTGAAA
TAGCAGGCCATGCAAAACCTTGCCCTGTGGATATTGAAGCAAGACCTGTCGTAGAAGGAC
TGTCGCCAGCAGATGCCGAAGAAATCGTTGACATTTTAACTGAAAGATGTCCTAGTCTTG
TTTTCGATGAAAATGGTGATAAGAAGCCATTCAATGAAATCTTAACTTGCTGTGAACCCG
TCCAAATCAGGAAGCTATCGGAGAGCTTAATGTTGGCCGATGGTATCCTGGGCCGTTGTC
CAACATGCTTAAGAAATTTCGCCAGACAAATTTGTGAGATGAACTGTTCTCCTGATCAAT
CTCGTTTCGTTGATGTCTACACTGAAGTATCAGGAGGTGTCCGATATGTGAACGAAATCG
ATTATAGACTTTATGAACCGTTTATGTTGGGAGCTCACGCATCGTGTGCCGGCGTTATAA
TTCCACAAACGGGCTTACCAGCAATTAACATGATGTGTGGCAATGCAGTTGTTTGTGATG
CTGATGCATGGTTTGGATTTACTGGAGATACCTCAAGCAATCCAATGGCACCGGTGCAAG
TTAACTTTTTAAGGTGGCCTACACCCGAAGACTCAATGAATGCGCCTGCTCCACAGTGTA
ACGAAACCGCAGAAGGTGATCTTCCATGTAGTTGCGTTGATTGCGCTGCGATGTGCCCAA
CTGGGACTGAGCCCGTTGTTCCTGAAATTTGTACTGTTCTAGACGTTCACTGCGTTGGTT
TCGCAGTTGGTATTACGGTATTTGTAATAACAACTATAATATTCATTATTTTAACGCTAC
TAGAATACCGTAAGCTAAGGAAAGTTGAAACCAAGACTCCGTTACCGGCCGATGTTCAAA
GGTTTACAGTATTTTTCCAAAATCTATTTGCGAAGATTGGTGTTTTTGCCGCAAACAATC
CTATACTTATAATAATGGTAACCTCGTGGGTATCAATAGGTGTGTTATATGGCGCTTTTA
GTCTTAACATAACTTCGAATCCTATTGAACTTTGGTCTTCACCAGTATCCCGCAGTCGAG
AGCAATTAAATTATTTCAATACTAGATTTGGTCCTTTTTACCGTGCGGCACAAGTTTTCT
TGCAGTTCAAAGGATTGGAGCCATTTGAAGTAGATAATGTGACATATGGATCTGCATTTA
GAATTGAAGCTATTCATGAATTGATCAAATTAGAAGATGAAATTTATAAAATTGGAAAAG
ATGACGGTGGTGTTTCACTAGAACAGGTTTGTTATGCTCCTAATCGTCCCAGAGGGGGAG
AACAAAGACTTGATCAATGTGTTTCGATGTCTGTATCTGTATACTTCGGTCAGGATAGGG
ATAACATCAATGAAAATACCTATTTAGATCAAATACAAAATTGTCTGAACAATCACTATG
CACTCAACTGCTTAGCATCATGGGGAGGTGGTTCCGAACCTGAGATTACTTTTGGAGGTT
TCGAAGGAAACAACATTCTTAGTGCTGACACGCTTCTTATTAACTTTCCAATTACAAACT
TCATGTTAGAGGAAGATTTGAGACCTGTCTTGGAATGGGAGCAGAAATTCATAGATCTAT
TGCATGACTACAGAGACAACTGGAAGTCAGATTTCGTTGAAGTGGCTTTCGGAACCGAAA
GATCAATCGAAGATGAGATTCGACGGGTTTCAGTTGCGGAAATTTTGCCGATTTCGATAA
GCTACATTATAATGTTTATATATGTTATTATAGCGTTAGGAAATGTAAGGCACTGTAAGA
CGTGGTTACTTGATAGTAAAATAGTAGTAGCAGCTGGTAGTATTGTCGTAGTACTCCTTT
CCATTGGATGTGCTTTAGGCTTAATGGGCTACACAGGTATTACAACAACCTTATTGGCCA
TTAATGTTATACCTTTCTTCATTCTTTCAGTTGGTATTGACAACGTTTTCTTAATGGTGA
ATACATTGCACGATATTCAGAACGATCTTAAATCATACGATGACTATAACGAAAATTTTA
GTTTTTCAAAGAAACGTAGTTTCGTTTTTGAAAAGATGATGAGTGCAGTCGGCCCTTCCA
TATTTGTTTCATCAGTAACCCAAATTACTTGTTTTGGTATTGGAAGTATAACTAATTTCC
CAGCTGTTCAAACATTTGCTGTATTTGCGAGTTTTTCCTTAACTTTCCTATTTGTATTTC
AAATCACGACTGTGGTAGCGATTTTGTCCCTTGATTACAAACGTGTGTCGCAAAACCGCC
CTGATCTATTTTGCTGTATTCGAAAGAAGATTCTTAATGATGACGATCCTTTAAATTCTG
AAACTCCTTATAAGAGTATCACGAAAAGACTCATGAAGCCTTATTCTAAATTTTTACTAA
ACTGGAAGACAAAGATCATTGTTGCTATTTTGTTTATGCTGTTGGTATCTACTAGTGTTG
TTTTGATTCCACAAGTGGAAATTGGTTTAGACCAAGAAATGAGTTTGCCAACCGATTCTT
ATGTATATAGTTATTTAGTAGCAGTTAGTAAGCTTTTACGTCTTGGACCCCCGGTATATT
TTGTTCTTAAGGCTGGCTTAGACTTTTCAAACACAAATCATCAAAATGTTATCTGCGGTG
GTCAATTATGTTATGATGATTCTCTATTCACTCAAGTGTTTTTAGCTTCTCAACATAGCA
GCATCACTAGGATTTCAAAAAGTTCTAATTCATGGTTAGACGATTTTATTGATTGGACAA
GTTTGTCTGGAGCTTGTTGCAAATATAATACAACCGATAATGGATTCTGTCCTAGTACAG
ATAACTCCCCTGAATGTGCTTTCTGTACTATAGGAAGGGACGAATGGGCCAACGGATTAC
GTCCCAGTTCAGAAGCGTTTAAGAGATATATTCCATTCTTTTTGCGAGATGAACCGACTC
CAACCTGCAATAAAGGGGGTCTTGCGAGTTATGCAAATGCCGTGAATTATTTACTTGATT
CTGAAGGACATGCCACTGTGCGTGACACTAATTTCATGGCTTACCACACTTCAGTAAGTA
CATCTTCAGATTATATCGAAGCAGTAAAGTATGGATATGAAATCAGTGATAGTATAACTG
CAGCCATAAAGAAACGCACAGGTCTAGATGTGGAAGTGTTTCCATATTCAATATTTTACG
TTTACTATGAACAATACCTAACCATATGGGGTGATACGTTTGCAGCTCTAGGCTATTGTC
TCATTGGTGCATTGGTTATCAATTTACTAGCATCTGGATTCAATTTCTTAACAACTTTTG
CCGTTATATTTACGGCGATTTTGGTTGTCATAAACATGATGGGCGTTATGTACATTTGGA
ATATTCCTTTAAACGCTGTGTCTTGTGTTAACTTAGTTGTTTCTATCGGTATTGCTGTTG
AGTTCTGCAGTCACATTGCCTATGCATTCGATTCGAGTACTCGTCCCGCAGATGAAAGAG
TACAAGATGCGTTACAAAAGATAGGTTCGACAGTTATTACTGGTATTACATTTACGAATA
TACCTATTATTGTTTTAGCGTTCTCATACACGCAAGTAATAGAGGTATTTTTCTTTAGAA
TGTTCTTTACTTTGATAATATTGGGATTCTTACACGGGATGGTCTTCTTCCCTGTATTGT
TAAGCTACCTGAACAATTTAAGGAACAAATAACTTTGTGATATTATTCTTAATAATTTTT
AATTAGATTTAAAACTAATGTACACTAATGTATGTAGGTAATGAAACTGTAAGAAAAAAA
CAATTTGTAACCTCAAGATTATTACAAACGTAATGTTTTTTTTATAAATACATTTTTTAA
ATTCTATTGCGATCAATACGGAACAGCTTCAAAATGTTAATTGTCATGTTTTGCTTTTGT
AATTAATTCACTTTCGATAGGAAAATATCATTCAGAATAACATTTTCATCTTAATTAAAT
TTTCAAATGGAAAAATGTAAATTGCTTAAATTAAATGGCGAAAGCATAAGGAACGGATGA
TGCTTTTTGCTATTTTAAAATTATTTATTGAGTATAACTGTTTATTACACGTTAATTTAT
TTTTAAACCTAGTCTAATTTATATTTATATAAATAAATGCTTCATAATAAAAAAAAAAAT
TAACGTGTAATA
(5352 bp)

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