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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40874_c4_seq17
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_Niemann-Pick_C1_protein-like_[Papilio_polytes]
Ontology
GO:0001618 F virus receptor activity
GO:0004872 F signaling receptor activity
GO:0004888 F transmembrane signaling receptor activity
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0006897 P endocytosis
GO:0006914 P autophagy
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0007628 P adult walking behavior
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015248 F sterol transporter activity
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016242 P negative regulation of macroautophagy
GO:0030301 P cholesterol transport
GO:0031579 P membrane raft organization
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042632 P cholesterol homeostasis
GO:0045121 C membrane raft
GO:0046686 P response to cadmium ion
GO:0046718 P viral entry into host cell
GO:0048471 C perinuclear region of cytoplasm
GO:0060548 P negative regulation of cell death
GO:0070062 C extracellular exosome
GO:0071383 P cellular response to steroid hormone stimulus
GO:0071404 P cellular response to low-density lipoprotein particle stimulus
GO:0090150 P establishment of protein localization to membrane
GO:2000189 P cholesterol homeostasis
Transcript
Level		FPKM:51.94 TPM:41.04
ORF EntryO_BomoMG21943_complete:A_BomoMG_comp40874_c4_seq17
Sequence
(Nucleotide)
CGAAGCGCCAGTCAAGACGCAAGCGCACAACATGGAGCAGGGCCAATTGTGGAGACAGTA
CATCATAGCCGGCGTGGCGAACATCGCCACCATTGCTCTGGGTTTTGCTTTGGGATGGAC
TTCGCCGGTGAACTTGAAGCTCTTAGATCCTAACGACACACCCTTGTCGCGACCCGTCAC
CAACGACGAAATATCATGGATCGGATCCCTTCTCTCCGTCGGAGCTATGTTCGGACCATT
CATCGGAGGTTTCCTGGCTTCAAAAATCGGTCGTCGATGGAGTATTCTTCTGTCATCTGT
TCCACTCATAGTCGGTTTTGTTTTGGTGGTGGCCGTTCAAAATGTTGCAATGATTTACGC
CGGCAGAGTGTTCTGGGGTCTGGCAGTCGGTATGCTGTATACGGTTTTGCCGATGTACTG
CGCCGAGATCGCCACGGACGACACGCGCGGTGCCCTGGGATCGTTCCTTCAGCTGTTCGT
AGTGCTTGGCTTCCTGCTGGTGTACGGAGTGGGACCGTTCGTCCCCTATTTCACGCTGCA
GTATGTCGGGATAGCTGTAGTCGCGGTCTTCTGCGTGCTGTTCTTCTTCATGCCTGAAAC
CCCGATGTATTATTTGAACCAAGACGACGTAGACTCGGCTGCTAAATGTCTGCAGATCAT
CAGAGGAAAATCTCGCGCTGGTGTGCAAGCTGAGCTAGACAAGATGGCCGCTGAAGTCAA
AGCTGCAAACGAGAAAACTGCTAACTTATCGGACGTGTTCCGTGGCGCCAACTTCAAGGC
GTTCTACATCTCGTGCGCCCTTGTGGCCGCCCAGCAGCTCTGCGGCATCAACGCAGTGCT
GTTCTACATGGCGACCATCTTCGAAACGGCTGGGGCCAGTCTGGACTCCGCCATCGCGAC
AATCATTATCGGTGCCGTGCAGGTCGGTGCTTCAGCAGTCACGCCCCTGGTGGTGGACCG
ACTCGGCCGCAGGATGCTGCTCCTCATCTCCTGCACCGGAACAACTATTGGACTAGGACT
CCTTGGCATGTACTTTATATTGGACACCAATGGCAACGCAGTAGTCGACAGCATGAGGTT
CTTGCCTATCCTAGCCCTAGTGCTGTTCATCGTGACGTACTGCGTGGGTCTGGGTCCTCT
GCCGTGGGCTATCATGGGAGAACTCTTCCCGATTGAGGTGAAGGCGTTGGCTTCTCCGAT
AGCCACTGCCTTCTGTTGGATGCTGTCCTTCTTGGTCACTAGATATTTCAACCCGATAGC
TGATGCAGTCGGTATGGGCGTGGCGTTCCTCATCTTCGGAGTTTGCTGTATAATAGCGTT
CTTCTTCACATTCTTCATGGTGCCGGAGACGAAGGGCAAGAGCTTCCAGGAGATCCAGGA
AATGCTGGCTGGGAAAACTTCGCCATCGAAATCCGAGAAGATGTAAACCAGATGAAGTTT
CTGAAACTTACTTATAATTTTGGAAGCGCAACTTTCTTAGCTCAATGTGTCTTAATCAAT
AATTAAGTTAGTATTTTAAATGATACTCTGATTTAGAGAAATACTAATTTTTTGTAGTGA
AACTTCTTTAGGCGCGTTGAGGGTAAACTTTACCTCGCGACAGATTCGTTACGGCTAGAG
AGAAAAGATACAATTTAAGAAGAGCGAGAGTGAGAAAATATACAAAGCGTCTCGCGAACC
ATTCGACCTTAGAGAGAGGGAGAAAGCAAGCTAGGTCTTTCTTTTATACAAATTCTGTTC
GCGGGCGACGGCCACTAGATGGCTTGTTGTTAACTTTTCATTGTTCCTGTAGATGGCAAC
TAACTATCTTATATTTTATTTTTAAAGAAGTATTACAAAAAATATAAATTAAAATATATA
TAAATGATGAAGAGAGATGAGAATCGTTTCTCTTATACACAGCATTCCATATTATAAGAG
AAATTTGATTTAAGGATGTAAAATAAAGAAAACCACAATACTACACACCGCAAAAGAAGT
TTCACTTCTTTCACGTGCACCAAGTTGCGCGTTCACATTTTTTTTATTATTGAGACAACT
CGCCTCTATGTTTTCTATACCTACTTCTCCTGTACATCATGAAGAGAGCCTTTGTGTAAT
GTTCAGTTTTCTAGTTTCAATAGCTTGGGTTGGATATTTATCAGTGAGTCAGTTATGAGC
GAGTCCCACAAGTCGGTTAATATTGACTTTCATAGAATCGAATTTTTTACGTACCACATT
GTTCTTCTCCCTAAATTATTAAAGAACTATATGCTTATAGCCATTAGCTTTTATATAATA
AGTACATGTTACTGGTAGTTGATTTTGGTTTGTTAATTAATCTTTATTTTTGTAAATTGC
AAATTAATAAATAAATAAAAATTAGACAATAACGAGATTAAATAAATAAAATTCCGAATT
TATCTGATCTTATTTTTTTGATAAATCCTGTTTATGCTATTTTCGTTTTTTAAATTATAT
CATTGTTTTCTTAACTACATCATCTTTGGGCATAAGTCTCCCTTTTTTACCCCATAATCT
TCGATCGTCCGCCAGTCTCATCCACGACTTAATACATAATAAATAATAATTTAAAAATTT
GAAAATATTATCTTAGTGTTTTAAGTTAACGTATCTTTATTCTAAAATTTCTAATCACCG
ATTAATATACCTTTAATCACACACCTGCATGTTTAACTGATAGATATCGATAGCGTTACG
ATATCGTTTAGATTAATTTGTCCGTCGTTCCTTATGGTCTTTCACTCGTGAAATAGGGCC
GCCGTGAGCCGATTGTCTGTTATTACTTAAATATGCAAAAGTAGCACCGTATTTACGTAT
AAAATGAATTTTTTTATAACGCTCGTTCTTGTGTTTTTGTATACAAGCGATGTGAAGGCG
AAATGTCGATTTCGCGGTGAGTGCATTGAAATAGCAGGCCATGCAAAACCTTGCCCTGTG
GATATTGAAGCAAGACCTGTCGTAGAAGGACTGTCGCCAGCAGATGCCGAAGAAATCGTT
GACATTTTAACTGAAAGATGTCCTAGTCTTGTTTTCGATGAAAATGGTGATAAGAAGCCA
TTCAATGAAATCTTAACTTGCTGTGAACCCGTCCAAATCAGGAAGCTATCGGAGAGCTTA
ATGTTGGCCGATGGTATCCTGGGCCGTTGTCCAACATGCTTAAGAAATTTCGCCAGACAA
ATTTGTGAGATGAACTGTTCTCCTGATCAATCTCGTTTCGTTGATGTCTACACTGAAGTA
TCAGGAGGTGTCCGATATGTGAACGAAATCGATTATAGACTTTATGAACCGTTTATGTTG
GGAGCTCACGCATCGTGTGCCGGCGTTATAATTCCACAAACGGGCTTACCAGCAATTAAC
ATGATGTGTGGCAATGCAGTTGTTTGTGATGCTGATGCATGGTTTGGATTTACTGGAGAT
ACCTCAAGCAATCCAATGGCACCGGTGCAAGTTAACTTTTTAAGGTGGCCTACACCCGAA
GACTCAATGAATGCGCCTGCTCCACAGTGTAACGAAACCGCAGAAGGTGATCTTCCATGT
AGTTGCGTTGATTGCGCTGCGATGTGCCCAACTGGGACTGAGCCCGTTGTTCCTGAAATT
TGTACTGTTCTAGACGTTCACTGCGTTGGTTTCGCAGTTGGTATTACGGTATTTGTAATA
ACAACTATAATATTCATTATTTTAACGCTACTAGAATACCGTAAGCTAAGGAAAGTTGAA
ACCAAGACTCCGTTACCGGCCGATGTTCAAAGGTTTACAGTATTTTTCCAAAATCTATTT
GCGAAGATTGGTGTTTTTGCCGCAAACAATCCTATACTTATAATAATGGTAACCTCGTGG
GTATCAATAGGTGTGTTATATGGCGCTTTTAGTCTTAACATAACTTCGAATCCTATTGAA
CTTTGGTCTTCACCAGTATCCCGCAGTCGAGAGCAATTAAATTATTTCAATACTAGATTT
GGTCCTTTTTACCGTGCGGCACAAGTTTTCTTGCAGTTCAAAGGATTGGAGCCATTTGAA
GTAGATAATGTGACATATGGATCTGCATTTAGAATTGAAGCTATTCATGAATTGATCAAA
TTAGAAGATGAAATTTATAAAATTGGAAAAGATGACGGTGGTGTTTCACTAGAACAGGTT
TGTTATGCTCCTAATCGTCCCAGAGGGGGAGAACAAAGACTTGATCAATGTGTTTCGATG
TCTGTATCTGTATACTTCGGTCAGGATAGGGATAACATCAATGAAAATACCTATTTAGAT
CAAATACAAAATTGTCTGAACAATCACTATGCACTCAACTGCTTAGCATCATGGGGAGGT
GGTTCCGAACCTGAGATTACTTTTGGAGGTTTCGAAGGAAACAACATTCTTAGTGCTGAC
ACGCTTCTTATTAACTTTCCAATTACAAACTTCATGTTAGAGGAAGATTTGAGACCTGTC
TTGGAATGGGAGCAGAAATTCATAGATCTATTGCATGACTACAGAGACAACTGGAAGTCA
GATTTCGTTGAAGTGGCTTTCGGAACCGAAAGATCAATCGAAGATGAGATTCGACGGGTT
TCAGTTGCGGAAATTTTGCCGATTTCGATAAGCTACATTATAATGTTTATATATGTTATT
ATAGCGTTAGGAAATGTAAGGCACTGTAAGACGTGGTTACTTGATAGTAAAATAGTAGTA
GCAGCTGGTAGTATTGTCGTAGTACTCCTTTCCATTGGATGTGCTTTAGGCTTAATGGGC
TACACAGGTATTACAACAACCTTATTGGCCATTAATGTTATACCTTTCTTCATTCTTTCA
GTTGGTATTGACAACGTTTTCTTAATGGTGAATACATTGCACGATATTCAGAACGATCTT
AAATCATACGATGACTATAACGAAAATTTTAGTTTTTCAAAGAAACGTAGTTTCGTTTTT
GAAAAGATGATGAGTGCAGTCGGCCCTTCCATATTTGTTTCATCAGTAACCCAAATTACT
TGTTTTGGTATTGGAAGTATAACTAATTTCCCAGCTGTTCAAACATTTGCTGTATTTGCG
AGTTTTTCCTTAACTTTCCTATTTGTATTTCAAATCACGACTGTGGTAGCGATTTTGTCC
CTTGATTACAAACGTGTGTCGCAAAACCGCCCTGATCTATTTTGCTGTATTCGAAAGAAG
ATTCTTAATGATGACGATCCTTTAAATTCTGAAACTCCTTATAAGAGTATCACGAAAAGA
CTCATGAAGCCTTATTCTAAATTTTTACTAAACTGGAAGACAAAGATCATTGTTGCTATT
TTGTTTATGCTGTTGGTATCTACTAGTGTTGTTTTGATTCCACAAGTGGAAATTGGTTTA
GACCAAGAAATGAGTTTGCCAACCGATTCTTATGTATATAGTTATTTAGTAGCAGTTAGT
AAGCTTTTACGTCTTGGACCCCCGGTATATTTTGTTCTTAAGGCTGGCTTAGACTTTTCA
AACACAAATCATCAAAATGTTATCTGCGGTGGTCAATTATGTTATGATGATTCTCTATTC
ACTCAAGTGTTTTTAGCTTCTCAACATAGCAGCATCACTAGGATTTCAAAAAGTTCTAAT
TCATGGTTAGACGATTTTATTGATTGGACAAGTTTGTCTGGAGCTTGTTGCAAATATAAT
ACAACCGATAATGGATTCTGTCCTAGTACAGATAACTCCCCTGAATGTGCTTTCTGTACT
ATAGGAAGGGACGAATGGGCCAACGGATTACGTCCCAGTTCAGAAGCGTTTAAGAGATAT
ATTCCATTCTTTTTGCGAGATGAACCGACTCCAACCTGCAATAAAGGGGGTCTTGCGAGT
TATGCAAATGCCGTGAATTATTTACTTGATTCTGAAGGACATGCCACTGTGCGTGACACT
AATTTCATGGCTTACCACACTTCAGTAAGTACATCTTCAGATTATATCGAAGCAGTAAAG
TATGGATATGAAATCAGTGATAGTATAACTGCAGCCATAAAGAAACGCACAGGTCTAGAT
GTGGAAGTGTTTCCATATTCAATATTTTACGTTTACTATGAACAATACCTAACCATATGG
GGTGATACGTTTGCAGCTCTAGGCTATTGTCTCATTGGTGCATTGGTTATCAATTTACTA
GCATCTGGATTCAATTTCTTAACAACTTTTGCCGTTATATTTACGGCGATTTTGGTTGTC
ATAAACATGATGGGCGTTATGTACATTTGGAATATTCCTTTAAACGCTGTGTCTTGTGTT
AACTTAGTTGTTTCTATCGGTATTGCTGTTGAGTTCTGCAGTCACATTGCCTATGCATTC
GATTCGAGTACTCGTCCCGCAGATGAAAGAGTACAAGATGCGTTACAAAAGATAGGTTCG
ACAGTTATTACTGGTATTACATTTACGAATATACCTATTATTGTTTTAGCGTTCTCATAC
ACGCAAGTAATAGAGGTATTTTTCTTTAGAATGTTCTTTACTTTGATAATATTGGGATTC
TTACACGGGATGGTCTTCTTCCCTGTATTGTTAAGCTACCTGAACAATTTAAGGAACAAA
TAACTTTGTGATATTATTCTTAATAATTTTTAATTAGATTTAAAACTAATGTACACTAAT
GTATGTAGGTAATGAAACTGTAAGAAAAAAACAATTTGTAACCTCAAGATTATTACAAAC
GTAATGTTTTTTTTATAAATACATTTTTTAAATTCTATTGCGATCAATACGGAACAGCTT
CAAAATGTTAATTGTCATGTTTTGCTTTTGTAATTAATTCACTTTCGATAGGAAAATATC
ATTCAGAATAACATTTTCATCTTAATTAAATTTTCAAATGGAAAAATGTAAATTGCTTAA
ATTAAATGGCGAAAGCATAAGGAACGGATGATGCTTTTTGCTATTTTAAAATTATTTATT
GAGTATAACTGTTTATTACACGTTAATTTATTTTTAAACCTAGTCTAATTTATATTTATA
TAAATAAATGCTTCATAATAAAAAAAAAAATTAACGTGTAATA
(7003 bp)

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