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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40846_c0_seq1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:4.57 TPM:3.61
ORF EntryO_BomoMG21635_3prime_partial:A_BomoMG_comp40846_c0_seq1
Sequence
(Nucleotide)
CGCGGCCGCAGCGCAGCGCGTGCCACACCACCGCGCCCACGCGCTCCGTGCCCCCGCCGC
GGCTCTTTGGAATTTCTGCTTGACAGCAGTAACTCTGCGAACATAAGATCTGTCCGCAGA
CGAGACACATCGTTGGATTTTTACTGTCCTCGCGGTCCGAGTTAGGGCAGGGGAAGTCCG
AAGCGATGTTCATCAGTTCAGAGAAGTCTTCGGGCAGCGGGACGAGCCGCGGGGGCTCGC
TGGGCTCCAGCACCACGCTCGCCTGGATCTCGCCCTTGAACCAGTCCCCGGACAGCGCAG
CCCACGCGAAGGCCTTCTTTCTACCGTTCGGATTGTCGATTAAATCCTTGAAAGTGAGCG
GCAGATCTAGATACCCGCACATGATATCCCACTTGTCCCCGTCGACGGTTGTGAGTTCCG
TGGGCGGGTTTATATCGCTGAGGAAGTAGTAGAATATGCAGCAACACCTTAAGAACGAGT
GGCACTGTTTCTGTATTTGATCCCAGACTTTATTCGGATCGAGGTTATCAGGTAAATCCC
CGCGTCGGAGCTCCTTAACGAGCGACAGCAAGTTTTCTAAATCGGGCTTGACTTTATATT
CCTCGTGTTCTTCCATCGCCTCGGTGGTGCACGACGTGAGGTCGGCCACAATTAGGGCTT
TGACCATACTGGCTCTGAACGCCTGCAGGGATATCTGTCGAGCGAGGTGAGTGGGTCGGG
CCGGACCGGCCACTTTGCAGAAGAGCGAGGGGGCGGAGAGCACCAAGGCCACTAGAGTAC
CGAAAGGGTCGTAGGTGAGGGGCGAGGTGCACTCCAGGGTGTTGAGCGAGCTGAGCGCGT
GGTGCGCCAGGTGCTTGGGCGTGGGCCACAGCGCGGGCAGCGCGGCCGCCATGCGGAGCA
GCGCCTGCAGCGCGTCGCGCAGGCGGGACGGGATCTCCACCAGCAGCGGGCGGCGCTCGG
CCCGCAGCAGCGCGTCGGTGCTCAGCACGGTGTACGACGTGGCGCGGTACAGCGCCGCCG
TGGACGCCATCCCGCCGTACTCGGACGCGGGTAAAACACTAGCAAATTCTTCGATTAACG
TCTTCGTAAGCTCATTGTACTGCGGCACCTCGCCCTCAAAGTGCACCAGGAATTCAGGCG
ACAGCAAGTTCTCCGAGTGAGTCGAGACGTAGACCTCGGCTTCGTCAGCGGACTCCTCCT
CCATGTCGGAGGACATGGCGCCCACGCTCCTGGCCCGCGCCTGGCAGTGCATCTCCTCGC
AGAACTCGGTGCACACGTGGACCGACTCGGAGCACACTTGGTGTTTTAGTTTCAGGATGA
GGTTGACGGCGTCGTTGTACATTTCCTCGGTGAGAGGGGGCGGGGTGCCTCCGGGGAGGG
CGGGACTGGGCAGTAGCGGGAGGGCGGTGTTACAGAGCCTCTCGCACAGCGGACACAGAT
ATTCTTTCTTTTCCACGTCGAAGGCAGCAGGCTGGCGGCCGCGATACGGTCTGCGATTCT
CCTTTTCAAGTACAGCATCAACATAATTCCTACAGCAGCGAGCGTGGAGCGCATGACCAC
AGCTCGAGACGTGAGGCTGGGGCCTGATGCCAGCAGGCAGCCAGGCGTCCCGACTCCTCT
CGTTGTCTCCAGCATCTCTGATCCGGCTCAGCACACCAGATTGTTGTACGAAGGCCACTA
ATACTAGCGGTTCTCCCGTTCCGTCGACGCGTGCCTCTTCTTGGCACATGATGCAGACCC
GCGGAGGTTCCGGGACTCCGCCCCCCCACACTCCGAGAGCAGCTCCGCAGTACAAAGGCC
GAAGGTCCTGTTCTTCAGCTGTTACCTCGGTGTTGGTTTCCTCGAACAATGTAGCGTTGT
TGGATATGAAATTTTTCATTTGAGTTTTCATCTGCGCCATCACCTTAGCTCTACGTTCCG
CCGCTAACTTCGCGCGACGTTCCTTTTCCGCTTCTGCTTCGGCTGCGTTCGGTTTCTCTT
CTTGATCAGTTTCCATTTTCTGTTCGTCTTGGTCGTCCGTTTCTCCTAACAGAGCTTTTA
TCCTAGTGAGCACCCATTTGGCGAGATGTCTGTGCGCGTCCACTCTGGGACTGGCCACCA
GCTTCTGTAGCAGCGCCACCAGGCCGCAACGATTCGCACTTTCGGCGAACGCTAAGAATT
CGTAGTGGCCGCTCTCTTCGTCTCGAATTGCGTAGCCCATTAAGTGGAGCGCCTTGTGCA
CTTGCGTCTCGGAGAAGGCGCGCGCCCGCAGGTCGAGGGCCCGCAGCAGCACGGTCCGCA
GCACGAGCAGCGCCGCGTCGCTCTGCAGCAGGTGCGCCAGCATCGAGAACGGCGGCGACA
GCTTCGGCAGCACCGGCGGCGGGCAGCACTCCGACAGGCCGGCAGCCTTCCTTCTGTTCC
TTTGTTCCTCTTCGCTCCTGGACAGTTCTTCTCTTGTGTAATGATAGAAGAAAGTGTCGT
ATTCATCGTACAAGTGCGATTTGAGTTTGTAGAGACCGCGGTTCGTGCCGCTCGTTGGCT
TCACGAAGTCCGCCACCTCGTTGATGACAGATTCGAGACCAGTTTCGTGCAGTTGATCCT
CTGGTAGACACCTGTTGAGTTCCGAGTGTGGCATCGGTTTAACACAGAGCATTTGTATAA
TCTCTTTTTTTGTTCTGTCTTCGTTGGTCACTTCCCCGACGCCGGGCACGTGGCGAGAAC
CGACAATAGTAATTAGTAGCCCCAGGAACTCTTCCACCATGCTAATTGTGTGTCTCAGTG
TGTCGTCCTCGATGCTTTGCTTCTCGAATTCAGGTGACGCCCAGTCCAGTAGGTTGTACT
TGTTCAGTACGTGTATCATGAATTCGTTGCTTTCGATTAGAGATGCGCCAATTTGCAGCA
TGACGACGTCCCGATCTAACATCTCGGTCCGACACTTCACGTTGTGGTAGAAATACAGCT
GATTGAGTAAGGCGAAGCCGTTCCTCCGCCACATGCCGGCGTGAACTTGGGCTATCATCG
CCATTGTCTGCAGCACTGGCTCGATGAGTTCCTCCGGCGACGATTTTTGTTTGTCCTGTC
GATCGAACTCCGGGCTGTGGTAGGACAGGCCGTGGCGGTGCAGCAGCAGGTGCAGGCCCG
CAATGTACCGCGACAGGGGACGATGGATCGACACCGGGTCCACGGAGACGTCGTACGGGA
TCACGGACGCGCTCTGGTTACCCAGCTCTTTGAGCTGTCGCGGCGCGGGCGCGGTGGCGG
CGGCGTGGCGGCGCAGCGCCATGCGGTAGGCGGAGGCGGTGAGGGGCCGCTCGGCCGCGC
ACCACTCCAGCGACATGGTGATGGACTGCGCCAGCTTCACGTGCAAGTTGAACGCGGACT
CCCACTCCGGCTCGTATTCCATGTGCTGACCCACCTGTCTAACAACCGAGTCCATCCCTT
GCATCATGACGAACAGGTTGAGCAGCAACGAGAGCCCGTGCAGGAAACCCTTCCGCAGGT
CGTCGTCGAAGCTCGCCGGCACGGAGCCCAGCAGGTACTTCACGTCGAACAGCACGAACT
GGGCGCGCTTGTACGCCACCGACACGTGGTTGCGATCGAACTCTAGACGACCATTATTGC
AGCGTCGGTTACACTCGCTCACAAAAGTGTTGAGCACGACGAAGAGCGCGTCGTGCTTCG
CGATGAGCAGGTGCGCCAGCGTCGGCGTCGTGTACAGCTGCACCGACAGCGACGATATCG
AGAACGAGTGGTCGTGGTCGTCTCGTATGAAGTCCTTCAGTATTGAGCCATAATTTTTGG
TGAATAATATAGCCATGGTTCTCTTCGTAGAATAGTCCATGAGCGTGGTGGCGATGAGCA
GCCGATGCCAGGCGGTCCTGGCGGCCTTCCACATGCGGAAGTCGTTCTGCATGACGCCGA
CGGCCACCCCGCCGCCCCCCACCGCCGTGCTCGAGCCCCACATGTCCTCGCCCAGCGCCA
CGTGGGACACGGCCATGCGCAGACTCTGCTCTTGGCTTACGAAGTTCTGAAGCCAGGTGA
GCAGCTTCATGGCGAAGGTCTGGTGCGCGATGACGTGCGCGTGCATGACCAGCACCTTCA
GCGTGGAGCTCTGGCGCGCCGTGAACATCTCGATGTCCGTTTTGAGTTTGTCGCAGACCT
GGAACGAGTTGCACTTGATGAGCGCCCGACCCTCGCGGTCGATGAGGCTCACCAGCTCCA
CGGAGTCGCGGTGGTTGCACTTCGTCACGCGTATCAACGTTGTTATCACCTGCTCGAAGG
TGTGAGTTTCGTCGTTGTAGAGCACCGTGCAGTAACAATCCGGCTGGTCCAGTATCTGCA
GGATGTCGCGCTCCGTGTCTTTCAATCTGAGATCGTTCGGCAAGCATGGAGCGTGATCGT
GTGTAAGCAGCCTTAGACAATAAGTCAAACAAGCTGATGCTACGATCTTCATTCTTCTTA
TAACATCCTCGCTTATGCCTGCCTCGGGCGGTTGATCGCTTGGAGCAGCATGCAAATCAC
AGAATGGATCCCGTTTCCAGGCCTCGGCGTCACCGCAGTCACAGCAGCCGCCGCCACCGG
ACTGCCCCATCTTGTACTTGTGGTGTCTATGAGCTGATACCTTGAAGCACTCCACGCAGA
GTACGCAAGTGTTATCCATGCCACATTCTCTGCAACTATATGCAGGTTCGCCTTGTTTGA
ACACCCGTCCGCAGAGTGTAGAGCGACGAGGGGGACCCGGTTGAGATCCTTCTGTTGTAC
CCCATATGAACTGTTCTAGGGGTTGGATGAGCAATTTGGCAGCTAGTTCCTCGTCGAAAG
ACCAGTCCAAACATGTTCTGTTGGGTTGTGGCGAATATATTCTCGGAACGGTGACGCGCC
AATGATCTTGAAAGTGCGAGGGCGCCAGTACACCCTCCTGCAGATTCTTCCGCCATAGTT
CCACTACAGCATCAGCGCGAGCCGGCAACGTGTACCTGTCGGCGGGTATCATGTCGGGGG
TCTCGTCATCCATTGAGCCATCACCAACCTCGACCTCCAGCTGCACTGGCGGTGGAGTAC
TCATCTCCACTTCTCACCAGTCGTTATGGACCCTTCAGTGTGAAATGTGCACAATCATCA
AACATAAATGTTGCACTATTAGGTAAATAGAATTAAAACACTAGAAAAAAATTAGTAATT
TGTCGTAATCCGTGATTATGTCTAATTCACAATTTTTCATGAAATCGAATTTTCTCTGGC
ACTAATCCACGAAAATTTTGACATTTCATCACAGCACATCGAACTGCAATGATCTCTATA
AAAACATTCTTGTTCACAGATTAATGATAAATACAACAAACTATTGAATATTTAATACGA
AATCACAAAATCTATATTAAAATGATCGAAT
(5371 bp)

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