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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40833_c0_seq4
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC4_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007283 P spermatogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:1.92 TPM:1.52
ORF EntryO_BomoMG21516_5prime_partial:A_BomoMG_comp40833_c0_seq4
Sequence
(Nucleotide)
TTAGAAAAAAACGCACGCATAATAGGTTTTAAAAATAAAAATAAGTATTTTCATTGATTC
GAAAAACGTGCAAATAACAAGAGCGCTTTTGACATTCACTAGAATTATCTAGAATTAAAA
TAAAATAAAACAAAAACCTTTCTATTAGGAATGATTGAGGGTGAGCAATCGTTTTTTTCC
CAAACAAAGTAAACTCCTCATTTCCTTTTTATCAAATTCGAATATTTACTGGTGAAATAT
AAGTGTCAAGATTCCATTTAAAATGAAATAATGACAATATTTCGATTTGATCGTTATTGT
AATGGATCCATGAAAACAAAGATTACATAAAATTTAACTTGTGGACGAAATCAATTAAAA
CCACCCGTTTATTCAAAGAGACAAGGGACGTTCGAAGTTGACCCTGCACGATTAATTATA
AAAGAGAGCGATATTGATTATCGATTTGACCGACCAATGATTTCATGATTCCATTTTTTT
ATAAAATGTCGATAACGAATGATTTAAAACGACTAGAAAACGAATATTATTTCTCAGACC
AGCGAGAAGCCCTGCGTCTGCTGAATGGCCTGCAGAAGATAATACTTGAGCCTCTCTTTA
GTCTTGTAACGCGGGAGATCTAGAAGATTGAAGCAAGTGTGGGCCACCGGGAAGAACCTG
TCGTCTGCCACTGGTTGAATTCTTATTTTAATGTCCCTCATTCCTTGTATCGGAACACGA
TCGCTGCCGGTTAAGAAAAGCAAAAATTTCTTCTTATCTTCAAGCGGCAGCTCGTGGAAC
GTTTCCCAGAACCATCTGATTTGTTGATCAGTTTCAGAGTATCCATTCTTGTATTCACAA
TTGTTCTGAAACATTTCCCAGTCGTACTCCTCGTTTCCGATGACAACGGACATCAATTCG
TGAGATCTAAACAGCTTTATTATTCTACCCCCGCACACCTTCTGGAAACCTTGATTGAAA
GCTTTAAATTGATTCTCCACAGATTTATTGAGCAAAAAGTCCACGTACAACTCAACGTAT
TCGGCTTTATTTTCGCGCGTCACAGGTATATTCTCTCCGTCCTCTTTCAGTGGATTCACT
TGTATTTGATCAAACACTTCAGTGTTCACGGCGAAACACAGTCCGAACACCTCCTCTACG
TCATCGTCTGTATATTCCAATAAACTTTTCAAACTATTGGCTAACGTTGGATACAAATCT
GACAAATCGTCCATCATAACAGATTCGCCGAGAATTTTCTTATACAAAACTAACGGGAAC
GGAACGTATATAATAATCGAATTGTATATGGCAAGTCCGTAAATGGCCCCAATCACATAA
TACATGACGTCATCTTCGAATGGATTATTTGAAAACCAAATCATGTTCGTCTCCTCGGAT
TGCTTGAACATACCGTATACGGGATCAAATATTTCCTTGAGCAGTAGCATGAAGAATTCT
TTTTTAACGCCACCGGCATCTTCCGCTTCTTCGCCAATAAACTCGACTCTGAGCGGTTTC
TTCAGTTGTGAAGTGTCATGGTTGCTTATCTGCAGCATGGTGTCCCTGACGATATGGTTC
CTCGAGACGGTCAGGTTGAGGAACTGATCCCTCTGATACTCGTAGGTCGGATCCATGAAG
AGCCTCGTGAAGATTTGCGTGGTGGCCCTGCTTATGGCGATCTGCATTTGTAGCTGCTGA
TCGATCTTCAGCAGCAACGACTTGCATTGGACGTCGAACAGGAAAGCGTAATTGCACATG
TGCGTCTGGGTAGAAGTTTGGTCCGACAACCAGTTAATATAATCAGAAGCGATGTCAACG
TGATCACACAAGTCCTCTATGTAGAAACATTCAGCCGGTATTTTAGGTAGCTTCGGGTTC
GTGAAGTTGATCTTGTTCAGCGACGACAACGTGTTCAATATCTGTACGGTGCTGTGTTTG
AATTGCACTTTCTTAGTCGATCTAACTACAGGCTGCATAAGTTCGTACACAACGACGCTT
TTGAATATATCTACGAGCATCTCAAAGTACTCCGTCGTCTGCGCCTCCCACCATAAGTTG
ACTATTTTTTGAGGATGAGTAGACAAGTTGTTGAAGGCTTCAGCAAAGGGACCCTGTAGC
TGGGTATGGCGTCTGGGATTTCTCATCTCGTGATATAGCGGTAATATTAGAAACATTCTT
AGAGCTTCAGCATCCGGTGGAGAGGGCTTCATTTTCTTAATTATATTATCCGTTAAGTGA
CTGAATATTAGTTCCTTGATGGACGTGTTTTCGAATCGGCTGATCAACGAGAACGCCTCC
TCGGCTTTGCTAAGGTCGACGCCCGGCATTTTGGTGTTGCAACAGTAGTGTCCGTTGCTC
GGCAGCAGGAAGGACGCGTTCACACACGCCAGCGAACCGAACACCGTCTCTAAGTACGCC
ATTAAATCCTGATTAACGAAATCTTTATCTTTGAAGACTTGACACGCGGCTAGCTTCGGT
AGAGTGAGCGTGAGTATTTGCTTCCTGTGGTCCGGAGTGCGGTAGTCGACCGGCCCGGAC
TTGTCGCCTTTCAATACCACGAAGCTGTGGTCACCTCCCGCGAACACTTTAATCGGACCC
GGAGATTCGTCGTTGGGTGTGAACGGTACAGGTGTCGGGACCAGCGCGAACGCCATGTGC
GGACAGCCAAGTTGA
(2655 bp)

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