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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40827_c0_seq8
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_hypoxia-inducible_factor_1-alpha-like_[Bombyx_mori]
Ontology
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
GO:0035035 F histone acetyltransferase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:3.03 TPM:2.39
ORF EntryO_BomoMG21484_complete:A_BomoMG_comp40827_c0_seq8
Sequence
(Nucleotide)
TTTCGCGCCTCGATGGACTGCTTCGTTGCATTGTCTGATGTGAGAATCCGTGTGTTACAA
TGCTCGTTTATGGGCACCAGTATCCCGGTCAGCCTGCTGTGGTGGGACAGCCGGAGGCAA
CGGCATGGAACATTCAGTGCCACGAAATGAACCAAAACCAGATTCCGGATAATCGCATGT
GCACTCACAGTGGTTACAATTCGAACTACCCTACAAATCAGTGTTACAATAACGATCCAA
ATCCGTATAGTGTCCCGGCTCCGTATTATCCCCCACAAGAGGTTTACAATTTAGGAGACG
TCCAAGTGGGCTATTTAAGGCAGCCCGTGATACCGAACCTTCCGTGCCAACAATCTCAAC
AGTGGGATTACAGTTCTATGTGCTATAATGTTGATGGTCAGCCGTGCCAGTATACGAATG
TTGTCGATTTGGAAGATTTTATGAACAATGAGAAACGCAAGGAGAAGTCGCGTGTCGCGG
CCCGGTGCCGTCGCACCAAAGAGATGCAGATCTTTTCGGAGCTCACGGCGGCCCTGCCTG
CAAAAAAGGAGGAAGTTGAGCAACTCGACAAAGCGTCCGTCATGCGTCTGGCTATATCGT
ACCTTCGCGTACGTGATGTAGTCTCGATGCTTCCAGATGTCAACTCGGATCAATCCAAGA
TGCAGAATCCCGAAGGCTTCGAAGAGTTAGCTTCAGAGCTGTCATACATGAGGGCTTTGG
ATGGCTTCGTTCTGGTGCTCTCTCAACAAGGAGACATCGTCTACTGTAGTGACAATATAG
CCGAACATCTTGGAGTTTCGCAGATGGAGATAATGGGACAGAGCGTGTTCGAATTCAGTC
ACCCCTGCGACCACGATGAGATCCGAGAGGCTCTACGTACAAACGGCGGTGCCCGTCGCG
ATCTCCTGCTGCGTCTCAAGTGCACACTCACCAGCAAGGGAAGGAATGTGCACCTCAAAT
CGGCTTCGTATAAAGTAATCCACATTACTGGCCACATGTTGGCGTCGACTGAAGACAACG
AACGTAACAATAACGAAACCAAAGCCGACGAAGAGAAGAAAGGGAAGGCTGGTTGTCTTG
TAGCAGTCGGTCGTCCCATCCCACATCCATCCAACATCGAGATACCGCTCGACAGCAAAA
CGTTCCTGTCCAAACACAGCTTGGACATGAAGTTCACTTATGTCGATGAGTCTTTGTTGA
ACACACTTGGCTTCGGTTCAGAAGAGCTGGTCGGACGTTCGCTGTACGATTATCATCACG
CAGCCGACAGCGCTTCCATGATACAACAGTTTAAATCACTATTCTCCAAAGGACAATGCG
AGACTGGACAGTACCGTTTCCTGGCGAAATCGGGTGGTTACTCTTGGGTCCAAACTCAAG
CCACCGTGATCACCGACAAGCAGCAGAAACCTATCAGCGTCGTCTGTGTCAACTACATCA
TAAGCGGTATCGAGTGCAAAGATGAGGTGTTTGCCGCACACCAAGTGCAGCACGCCGATT
TGAAACCGAAGCTGCCAGCTGTCGCGTCGCCGGGCGTCTCCTTCCGTGCACCCGTCGAAC
CGCTCGCTAACGGCGCTATAGTCGCCATCGTTCCGCCGGAGGAAGAACGACCTATACCGG
TCACGGAACTCATATTCGCACCGAGAAAGAAAGAAATGAATAAAGGCTTTCTCATGTTCT
CCCAAGACGAGGGACTTACAATGCTTAAAGACGAGCCGGAAGATCTGACACATTTGGCGC
CCACCGCCGGTGACGCTTGTATTCCACTGGAGAACAGTCCTTTTGATATGTTTGATGAGT
TTATATTGAGCGATAACTATTGTAGTTTGCTCGGCGATGATTTAGCTAACGGATCGCCGG
TAGATCCTCTAGCTCCCGATCCCTCATTACTATCATCGCCTGAATCACAGGAAAATGATT
CGTCTTGCGAACAATCCTCATTACTGACAGAGCTGTCGCTGGATGCTTTCGATAATACAA
GGTCGGACGAGATTGACGACAGCAATTCGCCATTTATACCTATAAGCGATGAGCTTCCCG
TGCTGGAGCCGGCTGTCATGTGGGGAGCCCTGCCTGACAGTGTTAGCCAGGCCAGACCGC
AACCTTCCGAGACGCACACATCACCGGCACCGGCATTACAACGCTTACTCACGGGTCCGC
CCCCTCAGGATCTCATTACCAGCATATACTCAGACCAAGGTCTAATGCCAAGCAGAAGCA
TATCAACTTGGGATACGGGAGTGAAACGAGTGATGAAAGAGGAAGAAGAGCCTAGTGCCA
AACGCGTGAAGCGTAGTCCCTCCCCAGTTGCACCAAAACCGAAATCGCAATCGTCGAGTG
TCCTCATGAACCTCCTGGACATCCCTCAACAGTCCACGCCACATAAGCAGCCCATGAAAG
CAAATTATCAAATCTTACCAAACACACAAATGTTAGGGCTCCAGAATGTACTTCATAGAA
ACATGCAAGTGCCTATCATAAACATAACGCAGGCCGTTCCTAACAAACATGTGATGCGCG
CCAGCACTCCCATCAATCAAATGCGAACAAACATGACAACCGGCCCTATGTCCCCGCTCA
GTCTCAACATAGGCAGCCCGATGTACTCCCTGCCTTCCAGCCCTAACAGCTATTCCAGTC
CCGCCATGAGCCCAGCGCAGAGAGAACGTGTTATGAGTCCTTACTCCACACCACAATCCT
TATCCCCAGTAGGTAAGTTCCATCAAATGTACAGCCCAGGGCAGAGGATGGTGTCTCCAA
CCGGCGTCATACAGGGATCAGACCCGTATCTGACGACGAAAATGCAGCCAAGCCCAGGGT
TCCCGATGCAGGTGAACGATATTCTACTGGACACGAACGTGCAACTCCCAACATCGGATT
TCTGGGCCGACCCGGAGTTTCTTCAGGGGACCAGCGACCTGTTAACTGCTTTCGATGACG
TCAAACTTGGGTAGACGCGTGCCGTTTTTAATGTATGTTGAACGTATGAATGTGGAGTGA
TTTCGAGCTAGGAACACTGGTGAGAGGATCATTTCTCCTCCCCTTTTGAATCATTTTCTA
TGTTTCGAAGGGTAATGAAGCGTATGAAAAATAAAGAACTGAATTATGTATGTGTGTACG
AGATTGAACTCACACAAACATTCTGACGGATGGAGTAATTTTATGAGTCGAAATCACTCG
AATGAATGCAGGGCCGAAAATTGTAAGGAGCGGTAGGTAAGGCTTTCCAACCAAGAAGGA
TTCCAGAAGGGTCTCTGTATTTTTTACCAAAGTCTACTATGAAGAAGATCATAGATTTAA
TACGATTCAATAAAGTCAGTCATTGACTTGTGTATTTGGAGTCCTTCCTAATGCAATATC
TTACAAGCCTTTCTCCGTCCGATATGTGACCCGTTACGATCCCATATCAACAATTGATTT
TAATTGTTGACATGTAATTTTTAACTTTTTTACAATTTATAAAGATCGATTATAACAAAA
TCAGGGCAGATGATAAAGCTTATTTGTTTTTAATGATTTGAACAATTAATATTGAAATTA
TATAGAATGTTTAAAATTATAGATTTATTATTAATTTTTTTATTATTCGATAATCGTCCA
CGAATATTTTAAAATAATATAACTTTATTT
(3630 bp)

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