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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40827_c0_seq4
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_hypoxia-inducible_factor_1-alpha-like_[Bombyx_mori]
Ontology
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
GO:0035035 F histone acetyltransferase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:1.66 TPM:1.31
ORF EntryO_BomoMG21475_complete:A_BomoMG_comp40827_c0_seq4
Sequence
(Nucleotide)
CCTAAATTGTGATCAGTGAGATATAATTGTGTTTTAGACATAACAAATACTATAGATAAT
CGTGGAAAGCGATATGATACTCTCCTTGGCAGTGTTCTAAGATTGTGTTAATATCGTGAA
GTTTCATAATAGTGTCTTTTATCACAAAAATCGAAATGTCTACGAAACCAGCAAATCAAA
AAAGGAGGAACAATGAGAAACGCAAGGAGAAGTCGCGTGTCGCGGCCCGGTGCCGTCGCA
CCAAAGAGATGCAGATCTTTTCGGAGCTCACGGCGGCCCTGCCTGCAAAAAAGGAGGAAG
TTGAGCAACTCGACAAAGCGTCCGTCATGCGTCTGGCTATATCGTACCTTCGCGTACGTG
ATGTAGTCTCGATGCTTCCAGATGTCAACTCGGATCAATCCAAGATGCAGAATCCCGAAG
GCTTCGAAGAGTTAGCTTCAGAGCTGTCATACATGAGGGCTTTGGATGGCTTCGTTCTGG
TGCTCTCTCAACAAGGAGACATCGTCTACTGTAGTGACAATATAGCCGAACATCTTGGAG
TTTCGCAGATGGAGATAATGGGACAGAGCGTGTTCGAATTCAGTCACCCCTGCGACCACG
ATGAGATCCGAGAGGCTCTACGTACAAACGGCGGTGCCCGTCGCGATCTCCTGCTGCGTC
TCAAGTGCACACTCACCAGCAAGGGAAGGAATGTGCACCTCAAATCGGCTTCGTATAAAG
TAATCCACATTACTGGCCACATGTTGGCGTCGACTGAAGACAACGAACGTAACAATAACG
AAACCAAAGCCGACGAAGAGAAGAAAGGGAAGGCTGGTTGTCTTGTAGCAGTCGGTCGTC
CCATCCCACATCCATCCAACATCGAGATACCGCTCGACAGCAAAACGTTCCTGTCCAAAC
ACAGCTTGGACATGAAGTTCACTTATGTCGATGAGTCTTTGTTGAACACACTTGGCTTCG
GTTCAGAAGAGCTGGTCGGACGTTCGCTGTACGATTATCATCACGCAGCCGACAGCGCTT
CCATGATACAACAGTTTAAATCACTATTCTCCAAAGGACAATGCGAGACTGGACAGTACC
GTTTCCTGGCGAAATCGGGTGGTTACTCTTGGGTCCAAACTCAAGCCACCGTGATCACCG
ACAAGCAGCAGAAACCTATCAGCGTCGTCTGTGTCAACTACATCATAAGCGGTATCGAGT
GCAAAGATGAGGTGTTTGCCGCACACCAAGTGCAGCACGCCGATTTGAAACCGAAGCTGC
CAGCTGTCGCGTCGCCGGGCGTCTCCTTCCGTGCACCCGTCGAACCGCTCGCTAACGGCG
CTATAGTCGCCATCGTTCCGCCGGAGGAAGAACGACCTATACCGGTCACGGAACTCATAT
TCGCACCGAGAAAGAAAGAAATGAATAAAGGCTTTCTCATGTTCTCCCAAGACGAGGGAC
TTACAATGCTTAAAGACGAGCCGGAAGATCTGACACATTTGGCGCCCACCGCCGGTGACG
CTTGTATTCCACTGGAGAACAGTCCTTTTGATATGTTTGATGAGTTTATATTGAGCGATA
ACTATTGTAGTTTGCTCGGCGATGATTTAGCTAACGGATCGCCGGTAGATCCTCTAGCTC
CCGATCCCTCATTACTATCATCGCCTGAATCACAGGAAAATGATTCGTCTTGCGAACAAT
CCTCATTACTGACAGAGCTGTCGCTGGATGCTTTCGATAATACAAGGTCGGACGAGATTG
ACGACAGCAATTCGCCATTTATACCTATAAGCGATGAGCTTCCCGTGCTGGAGCCGGCTG
TCATGTGGGGAGCCCTGCCTGACAGTGTTAGCCAGGCCAGACCGCAACCTTCCGAGACGC
ACACATCACCGGCACCGGCATTACAACGCTTACTCACGGGTCCGCCCCCTCAGGATCTCA
TTACCAGCATATACTCAGACCAAGGTCTAATGCCAAGCAGAAGCATATCAACTTGGGATA
CGGGAGTGAAACGAGTGATGAAAGAGGAAGAAGAGCCTAGTGCCAAACGCGTGAAGCGTA
GTCCCTCCCCAGTTGCACCAAAACCGAAATCGCAATCGTCGAGTGTCCTCATGAACCTCC
TGGACATCCCTCAACAGTCCACGCCACATAAGCAGCCCATGAAAGCAAATTATCAAATCT
TACCAAACACACAAATGTTAGGGCTCCAGAATGTACTTCATAGAAACATGCAAGTGCCTA
TCATAAACATAACGCAGGCCGTTCCTAACAAACATGTGATGCGCGCCAGCACTCCCATCA
ATCAAATGCGAACAAACATGACAACCGGCCCTATGTCCCCGCTCAGTCTCAACATAGGCA
GCCCGATGTACTCCCTGCCTTCCAGCCCTAACAGCTATTCCAGTCCCGCCATGAGCCCAG
CGCAGAGAGAACGTGTTATGAGTCCTTACTCCACACCACAATCCTTATCCCCAGTAGGTA
AGTTCCATCAAATGTACAGCCCAGGGCAGAGGATGGTGTCTCCAACCGGCGTCATACAGG
GATCAGACCCGTATCTGACGACGAAAATGCAGCCAAGCCCAGGGTTCCCGATGCAGGTGA
ACGATATTCTACTGGACACGAACGTGCAACTCCCAACATCGGATTTCTGGGCCGACCCGG
AGTTTCTTCAGGGGACCAGCGACCTGTTAACTGCTTTCGATGACGTCAAACTTGGGTAGA
CGCGTGCCGTTTTTAATGTATGTTGAACGTATGAATGTGGAGTGATTTCGAGCTAGGAAC
ACTGGTGAGAGGATCATTTCTCCTCCCCTTTTGAATCATTTTCTATGTTTCGAAGGGTAA
TGAAGCGTATGAAAAATAAAGAACTGAATTATGTATGTGTGTACGAGATTGAACTCACAC
AAACATTCTGACGGATGGAGTAATTTTATGAGTCGAAATCACTCGAATGAATGCAGGGCC
GAAAATTGTAAGGAGCGGTAGGTAAGGCTTTCCAACCAAGAAGGATTCCAGAAGGGTCTC
TGTATTTTTTACCAAAGTCTACTATGAAGAAGATCATAGATTTAATACGATTCAATAAAG
TCAGTCATTGACTTGTGTATTTGGAGTCCTTCCTAATGCAATATCTTACAAGCCTTTCTC
CGTCCGATATGTGACCCGTTACGATCCCATATCAACAATTGATTTTAATTGTTGACATGT
AATTTTTAACTTTTTTACAATTTATAAAGATCGATTATAACAAAATCAGGGCAGATGATA
AAGCTTATTTGTTTTTAATGATTTGAACAATTAATATTGAAATTATATAGAATGTTTAAA
ATTATAGATTTATTATTAATTTTTTTATTATTCGATAATCGTCCACGAATATTTTAAAAT
AATATAACTTTATTT
(3375 bp)

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