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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40825_c0_seq3
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_UBR5_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007112 P male meiosis cytokinesis
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007455 P eye-antennal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0008585 P female gonad development
GO:0016874 F ligase activity
GO:0030162 P regulation of proteolysis
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0042127 P regulation of cell population proliferation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
Transcript
Level		FPKM:21.08 TPM:16.65
ORF EntryO_BomoMG21446_3prime_partial:A_BomoMG_comp40825_c0_seq3
Sequence
(Nucleotide)
CTTCATGCCTCGCCAGAGCTTTCGGTATAGTGATCCGTCAAATCGCCGCCTTGCTTTGGG
AATACGAGCGCGTTACTTTACCATTACCCCGCGTGGTTCCACTGGCGTACAGAGAAGGAC
TGCGCCTACAATGTTATCTTGAGAGACAATTGAAGCCCACCTGGGATTGGCTTGTTACTG
TTATGGATGCCACTGAAGCACAACTCCGATTCGGCGCATCCTTAACTTCTAACAATGCGG
GCAGTTCAAGCGGCGACACTGGACGTTCGAATACAACCACAACGCGACGGACGACTACAT
CCCTAGCATCCCTTGCTACTCGTATTATTGGTTTCTCTGAAGGACCGAGGACCAGAGATC
GTGAACAAGGTGTTGAAGCAGGCAGCGCTCGTCGAGAGTTCCTTGCCTATTGCCTATCTC
TGCTGAGAGCACACAGCGCGGAACATGCCGAACAACTGCCTGTATTAGATGTAGCAGCTC
TTAAACACGTCGCCTATGTCCTTGATGCATTGGTCTACTACATGCGTGCTGCCCAACCTC
AGCCCCATCACCATTATCATTTGTGGACGCCGGATGAAAATGAAAATGAAGAAGGCGATG
AGGAGATGGTGGTCGGTAATGGAGCTACTGCCGAATCTGATGGCGAGGGCGATGGGGCGC
GTGGCCGCGGACATGCCTTCTTCCAGAGATCAGACTCAACACTTTGCCTTGGATGTCCCC
CACCTGATCCTTTTAACATGAGCATGCAAGAAGCTTTGCCTCTGGCCGATCAGCCTCAGT
TGCTTCAACCTAACGCTCGTCGTGAAGAACTGTTTGGTAAGCCGCGGCAGCCGGTAACCG
TGCCGCCCGCCGGTGACGCGCCACCGGGGATCAACAATCCACTCGAAGTAGTTCCACGCC
GTTTGGGATTGTCAACTCGAGGTAGTGACCGCGGCTGGTCGCCGCCCGCGCGCCCCGCCT
CTGCCCCTCCTGCGCACACGCACACAATCACTAGGGATGAACCACAGGATTTATCTTGCG
CCAATAAGGACCCAGCAACGAAAATGGATGTAGATACCGATGGTGAATATATGTCGGATT
CCGACTCTAACGAAGGAAGACAGATACCGAGGAAGAAACACCACAGACATCCACACTCTA
CTACTATTCCTGGGAGCAATTCTATGCAAGAGCCTGTCGTGCAGCCTTCAGAGTTTCATG
CCCTAGTCGATACTGCCTGCTCGATGATGGAAGCTCCACATCAACGAACTGTTGCCACTT
CACCCACTCCTGGGCCAAGTACCTCCACAGGCACAACCACCGAACCGCGAGCCTCAACTT
CGCGAAGCCCTGGCAAGACCGTTATTGGGGAATTACTGAGTGCTGCAGATCCACTGGAAT
CTCAAGAGATATCGGCGCATGTCACGGTAGAAACTACGGGATTGCCTCTGCAACCTGTAT
TACCAACACTCAATGCTCAAAATCAACCACGAGCGTGTCCCTCTCTGGGTGCATCAGTTT
CCCACGATCTTTTGCTTGGCCGTTGGAGGCTGTCTCTCGATTTATTTGGTCGAGTTTTTA
CCGAAGACGTTGGTTTGGAACCTGGATCCGTTGTAGCTGAACTAGGCGGGTTCAGAGTAA
AGGAGGTGAAGTTTAGACATGATATGGAAAAGCTTAGAAATTCACAGCAGAAAGACTTGA
CTCTGCACAAGATGGAACGTGACCGTTCAAAACTCTTACAACAAACGTTCGCGGAGCTGA
ATGGTGCGTTTGCCGGACAGAATAGACGAGCACATAGCGCACAACCTCCACTGGCTGTAA
ATCGCGTCAAGGTTACGTTCCGAGATGAACCCGGTGAAGGAAGCGGCGTCGCAAGATCCT
TCTACACTAGTGTAGCAGAGGCTTTACTTGCAAATGAAAAACTGCCTCCCCTTGAATCCG
CAACTGGCAACAATAGCACAAATAGCAGTACTAATGGAACATCTGGGCCTTCTGGCAACG
CCGCTGGTGGCACTGGGAGCAGCAGCGGCGCACGGAGCGGTGCAGGACGTGCGCGTTCAA
AGGAAGCAACGCGTCGTGCGGCCGGCCGTCCCGCGCCGCGCCCTGCGGCCTCCCGGGAGC
CGCGACGTGTGCTCAGTGTTGATGCACGACCATACTCTCCCCAGGCTGCTCCCGGAACCG
AAGGAGCTGGATACAGTGGAGAAAGATCTGGAGGACACAATGAACATCTTACACATCACC
AGGCTCAATTGGGAGAACGCCTATATCCAAGGGTACACTCTCTACACCCAACATTTGCTG
G
(2281 bp)

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