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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40825_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_UBR5_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0033160 P obsolete positive regulation of protein import into nucleus, translocation
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0035413 P positive regulation of canonical Wnt signaling pathway
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0050847 P progesterone receptor signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
Transcript
Level		FPKM:17.86 TPM:14.11
ORF EntryO_BomoMG21444_5prime_partial:A_BomoMG_comp40825_c0_seq1
Sequence
(Nucleotide)
CGCCGTTTTGAGATTGTTTATTATGAATACAACTAATCAAAGGAAAAAATCTAATCTTAA
TATTTATTTTTAGAGAGTGAGGCGCATAAATTTCCTCTGATATCACAAAACCATAATCAC
TCGGATCTTATGCCTCTGAACCAAGCACACCCAATCAGTTGTAGCAGTATACCCACTATT
ATATTCTTACTACCTTAGTATATATTCAATACTAATAATGAAGCTAGTTACAATTTTATT
GTTAGTTGCACTGCCTTGCTAAACAATAATTATTGTAACAAGGAAAGCAACTAAATGCAA
AAATATGTTAGGCCTTACGACAAAACATGGGAACAAAATTTACAATAGTTTTTGAACAAA
GATCTAGCTGTAATTTTTTTTATAAGTTAAATACCTACAGTCTACAATGTTAAATTTTTA
AACATGTGCTTGTCCGGGTATTATCTTCGGACCTTTCAGTTGTTAAATTTTGAATATTAC
TATTCAGTCAGAAACCCAGTCATGTTAAAGTCGGTAAGAAGAATAATAAGAATATTGATA
TACAAATCTATGCATATATTAAAATGATTTTCAGTGACCTCTATAGACAGGCTAATTGAA
AGTATAAAATTAAAATTATACAGATTGTCAGATAGATGATTATTTTATTTGAGAAAAAAA
GATGTTACTAATACATTGTAAAACGTAGGACCTATTTTATTATGTCATACATAAATAGCA
CATCGGCAGTCTTCCATGACTGGGATTATAACACTAATAAATTAAATAATTTGGCAACTA
AACTACACAAAGCCAAAGTTTTTAGTTTTGATAGCTAAAAGTAGTTTATGTTTGAGAACA
TGTCTCGAAGAATACAATGGTATGTACAACCGCGAAATGCATGTGTTAGCAGTGGGGAGA
TGCGCATCGTCAGCTGGTCGTATAGTAACTGATGGCATTGGTTGGAAACCTTCTTCAGAA
GCAGGCAAGGCTGGCGATCCAGTCCAAAAATATACTAAATCTTGTCTTTCTAAATGTGTC
ATTTTATCAACTATAGCCCATAGCCAACGTTTAAAACGAGCCAGCCGCTCTGGCTGTTCG
CCACTCTCATCATTGAAACTAGTGTAAGAAACTAGAGCTGCTACATTTATATCTCCAACT
CCATTCAGCAGTAGACGTAAATCCTCCGCCGTCAAACCTTCTAGCGCAGATTCTGGTAAC
ACGTCAAGAACCCCAACTCGCATTGCTTCAAGAGCCTTTTCTTGAGAAATCAACATTCTA
TGTTGGGAATATTTGCGTACATAATCATAAACATTGTGCGCAGTTACTTCAAGTTCTCGT
CCGCCCGGTATGAGTTCTACACAGCCACCACCTTCCTCTTCGCACATTTCCAAACTAAAG
TTGAGATCTAGAGCTGCGAAAAGTGACTGAGAATCCCCAGTTTCAGCATCGACTACAAGT
TGTCGCAGGCTCTCATATACGATTGGATCGAAGAATGCCAAATCGTGGAATCGAATTGGC
CGCCCGAGGATGTATTTTAAAACATGCCGATTTAAGAACATGGGGCACAGCTCATTTTGC
AAGAGACAAAGTCCAATGATTCTTCCAACATTTCTAAAAGCATTTATTCTTTCTGGTGCG
GCGCGTCCTTGTCTAGGTGAGTAGTACCCCCGTTTCCCGGGAGAGTAGAACAGAGGGGCG
GCGTCGTCAGTGATTGGAGCAGCTCCGTTTGCGCTGGACCCGCTACCAGATCCGCCGCCT
CGTTCGGATAGTGAGAATACATCTAGATCTAATATTGCCTCTGAAGGGTGCATTACGATG
AGATCCATGGCTTCGCGTACTTTCTGTCGCAAAGCATCTTCGCTGGCCAGCAGTACCAGA
AGTTGCGCAGGTGTCAATTCTAACAGCATACCTGTTATTTTTCCAGCAAATGTTGGGTGT
AGAGAGT
(1927 bp)

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