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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40814_c0_seq5
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_afadin_isoform_X3_[Bactrocera_cucurbitae]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0008022 F protein C-terminus binding
GO:0017016 F small GTPase binding
GO:0030054 C cell junction
GO:0034332 P adherens junction organization
GO:0043547 P positive regulation of GTPase activity
GO:0090557 P establishment of endothelial intestinal barrier
Transcript
Level		FPKM:4.82 TPM:3.81
ORF EntryO_BomoMG21332_3prime_partial:A_BomoMG_comp40814_c0_seq5
Sequence
(Nucleotide)
CGGGACGGGTGCGGCGTGGTGCAGGGCGGGCGTGCTCTTGCTGGGCTTCACGGCCTCCGC
CGCCAGCCGCGCGGGCAGGTCGCGCTCCGACGCACGACGCAACGCGCCGCCGCCCGCTGG
TCGCTGATTGTTGTAGGCCGGTTGGTGTAATAGAGTGGCTAGTCCGTGCAACATAGCTCC
TTGTTTCGCGACTTCTAAAGTGACGGTCGGACCCGTCCTTACTAAGTATTCAGCCGCCTT
TTCCTGTGTGATACCAACGAGCGACTGTCCATCAACGGATAGCAGTTGGTCGCCGGCCGC
CAGTCGCCCGTCTGCAGCCGCCGCGCCGCCCGGCACTACGGACTTTATATAGATACCCAA
TTTGCTTTGGCCTGCACCCTTTGCGGCGACTATACTGAGTCCCATGCCGTTAGCGTTCTT
ATGTAGTTGCAGGATATGTCGGTCGGGGACGGGCGGGGGTCGCGGGGACGCTCGGCCCAT
GTACACGGTCCACGCGCCGACCGCGTGCGGCTGGTGGGCGAGCCGACACAGCCCCGCCCG
CTGCAGGGGGGCCACGAACTCCGCCAGCCCGGGGGGCACGCCGCGGACCACCTCCGCGCT
GAACCCATCCCCGGGGATCAGCAGTCCGGCCCCCAGCCAACCGCCCTCCTCGACTCGTAT
CTCTCGTCCGTCGGCCCGGCACAGCTCGTCGGCGAGCGCCCGCGCGTGCTGCACGGCCGC
CTCCACGACCTCGGGCGCGGCGATGGGCGCGAGCAGCGCTCGGACTTGCGCGGAGTTCAG
CTTGAAGCACGCCGACAGCGCCGCCCGCACTTCCTCTGCGGTGCGATACTCGCCCTGTAT
CAGCCGGGCGGCCTGGTGCGTTCGCGCCAGATGGCAGTCGGCTGCTAGCTCGAGTCCCTG
CCGCTCGGCCCATGCCGCCACTAGCGCCAACCGCCCCGACAGCGCGCGCCCGTAGGCCGC
GCTCACACAGCCCGGCTCGCTCACCACCTTGTTGAAACAAACGGCGTTGATGTAGTGGAA
GAGATGCGAGAAGAGCTGTATGGTGAGCGCCGCGTTGACCCTGCACCGGCGCAGCAGCAC
CATGGCGGCGGCGAGCGCCTGCAGCGCGGGCTCGGTGGCGGCCGTCGCCTCCGCGCTGTT
GCCGCTCGTCAGAGCCGCCAGGGCGCGACCCAGACTCTCCTCGAAGCACGCCACCAGATT
ACTGAACGCGTTTTGTACAGTCATGGCTAGTAACTCTTGAGCTTGCGTTGAGAACGAGGA
GATATGTCTGTCGTATTTGAGGAAGTGCAGCAGTTCACTGGCGTTGGCCATCCAGAACGC
TTGAGCTGCAGAGTCACTAGCGCGTTCCTGTACAGTAGCGTGTATGAGTGTGGCGACGTG
GTGGAGGAAGGCGGTCAGCTTGTGGGCCCTCTCGGTCGGCGTCAGCTCGGGCCGGTAATG
AGTTGAAGCACGATATCTGGCGCAGAGATAGAGCGTGTAGACGGGCGCGAGTTTGAACGC
CGGGGCATGAGGATCGAGCCTGGTGATGACCGCGGCGAGGAACTGTTGTTGTCCCGCCTC
CGGGAACTCCAGCACGGCCGGCAGGATCGCTTCTTGGCCGATTCGACCAGCACCCATCCT
GTCGTATATGGATCCGGAGCCGTAGTTTGACTGCGACTGAGCCAAGTTCCTGTTGATCAG
GTTCTCCTGGGCGGGGTCCACGAAACGGAAAGTCGATACGCGCCCGAATTTCAGCAGACA
TCCGTGCTGTAATCGCTGTGTGTGCATGATCCTTTGTCCGTTGACGAAGACTTGCGCGTC
CGCGTGTAGCGGAGTCACGGTGTATCCGCCACCGTCAGCGGGAGCGACCACGCAATGCCG
GGATTGTATCGACGGTCCGTACAGCTGCAGGGCGGTGCCATTTCCCGAACCAACCTCGAC
GACATCGGTAATCCGGATTCTGCGTCCATTCTCTAGAGGCGTGGCGTCGGGCGCGACCTC
CAGAAGTAAAGGTTCGTTGCCTGGACGCCCGTTGGTGCCTGTGCCGACCTTCTTCTTCCG
TCGCCGTGGCTGTGAGTCCGCCGGACGCCGCCGCACGTGGAACATGATAGAGCTCCGAGT
CATATTCATCAGCGCCAACGGACACTCGTCATCTTCCAGTATGTACTCCGTGTTGTCAGT
CTTGTCTTCCTGAACGATACAAAACTGTTGAGGGTCCTGATGTCCCATTCCGTATTTTTC
GAGAGTTTCTTTAAGAACGGTCGCCGCCGAATCGTTGACCGACAGGAGTAGCGTTATGTA
CGAAACATCGGGTCTCAGTATACCGCCGTAGATCCTCAGCGTTCCTCCGGTATCGGGTCC
TCCGTCTTTCGACTTGAACTGCTGTAGCTTGCGCCCTAGCTTTTGTTGTCGACGACGACG
CATCACCGCTTCAGGGTTACTGATGCTTCTCATGAACGATGTTTCCGGCAGTTCTGTGTA
AAGTTTTTCGGCAACGGGTCGATTCTCATCGTTAGTATCAGACTTCAATCTCGACAGCTT
CTCTTTTTTCTTCAATTCTTTTTTCTCTCTCTTGGATAATTTTCTTTTGAAGTTTTGGTC
TCCCTTGTCGGATCCTATGACGGAGGCTTCATTGTTAGTAAGGCACTTAAGTAGGAATCT
CCCTTCTCTATCATCCGCGTGCCAGTTGAGTTGCACGAGGAGCGGCTTCTCGTGCGGCTC
CAGCTGGCGCTCGTCGTCGGGGCCGTGGGTCTCCCACAACGAGTACGAGCCGAGTGACAG
CATACGCATGTCCGGACGGAATTTCTCGATTAGTATCTCTATGACATCGCTGACGGTGGC
GTCGGAGGCGACACGGATACACTTCGTTGCTATCTTCTGACCCAGATCTTGGAAGTAGAA
ACGCATCACACCGTGGAACTCCAGATTCTCATTGGGTTCGCTGAGCGCGAACAGATCGAG
CCGGTTGGCGTTCCATTGGTGTATCATGTTGCGAAGCGCTTCACGCTCCAACATACGCTT
GTCCGCTGGGTCCATCGTGTCACCGCATCAAGTCCAGTTTTTTAATGCAGGATATTCGTG
GCTAGATGTCCATTGACAGCCGTGAGTGTAGCAAAAATCTACGCCATACTAGTAACATCT
TCAAATGTAAGCACAATCATTTTTTTACGTAATCTAATAACAAAAACACCAGAACAATCA
CTTCAAAAACTTTTCTGTAATACAAAACTTTTAACTACAAGTACTTCAGAGAACCGTTAA
CACTTATCACAAGTTAATCACAACACAACAAGATTACCGGCTTCAGACTGATTTATTTTT
AATTACCACAATTATGTAAATACAATATCATTGTTAATTTTTTTTGAATTCGATGACGTT
ATTA
(3364 bp)

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