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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40814_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_afadin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0008022 F protein C-terminus binding
GO:0017016 F small GTPase binding
GO:0030054 C cell junction
GO:0034332 P adherens junction organization
GO:0043547 P positive regulation of GTPase activity
GO:0090557 P establishment of endothelial intestinal barrier
Transcript
Level		FPKM:4.69 TPM:3.71
ORF EntryO_BomoMG21323_3prime_partial:A_BomoMG_comp40814_c0_seq1
Sequence
(Nucleotide)
CGGGACGGGTGCGGCGTGGTGCAGGGCGGGCGTGCTCTTGCTGGGCTTCACGGCCTCCGC
CGCCAGCCGCGCGGGCAGGTCGCGCTCCGACGCACGACGCAACGCGCCGCCGCCCGCTGG
TCGCTGATTGTTGTAGGCCGGTTGGTGTAATAGAGTGGCTAGTCCGTGCAACATAGCTCC
TTGTTTCGCGACTTCTAAAGTGACGGTCGGACCCGTCCTTACTAAGTATTCAGCCGCCTT
TTCCTGTGTGATACCAACGAGCGACTGTCCATCAACGGATAGCAGTTGGTCGCCGGCCGC
CAGTCGCCCGTCTGCAGCCGCCGCGCCGCCCGGCACTACGGACTTTATATAGATACCCAA
TTTGCTTTGGCCTGCACCCTTTGCGGCGACTATACTGAGTCCCATGCCGTTAGCGTTCTT
ATGTAGTTGCAGGATATGTCGGTCGGGGACGGGCGGGGGTCGCGGGGACGCTCGGCCCAT
GTACACGGTCCACGCGCCGACCGCGTGCGGCTGGTGGGCGAGCCGACACAGCCCCGCCCG
CTGCAGGGGGGCCACGAACTCCGCCAGCCCGGGGGGCACGCCGCGGACCACCTCCGCGCT
GAACCCATCCCCGGGGATCAGCAGTCCGGCCCCCAGCCAACCGCCCTCCTCGACTCGTAT
CTCTCGTCCGTCGGCCCGGCACAGCTCGTCGGCGAGCGCCCGCGCGTGCTGCACGGCCGC
CTCCACGACCTCGGGCGCGGCGATGGGCGCGAGCAGCGCTCGGACTTGCGCGGAGTTCAG
CTTGAAGCACGCCGACAGCGCCGCCCGCACTTCCTCTGCGGTGCGATACTCGCCCTGTAT
CAGCCGGGCGGCCTGGTGCGTTCGCGCCAGATGGCAGTCGGCTGCTAGCTCGAGTCCCTG
CCGCTCGGCCCATGCCGCCACTAGCGCCAACCGCCCCGACAGCGCGCGCCCGTAGGCCGC
GCTCACACAGCCCGGCTCGCTCACCACCTTGTTGAAACAAACGGCGTTGATGTAGTGGAA
GAGATGCGAGAAGAGCTGTATGGTGAGCGCCGCGTTGACCCTGCACCGGCGCAGCAGCAC
CATGGCGGCGGCGAGCGCCTGCAGCGCGGGCTCGGTGGCGGCCGTCGCCTCCGCGCTGTT
GCCGCTCGTCAGAGCCGCCAGGGCGCGACCCAGACTCTCCTCGAAGCACGCCACCAGATT
ACTGAACGCGTTTTGTACAGTCATGGCTAGTAACTCTTGAGCTTGCGTTGAGAACGAGGA
GATATGTCTGTCGTATTTGAGGAAGTGCAGCAGTTCACTGGCGTTGGCCATCCAGAACGC
TTGAGCTGCAGAGTCACTAGCGCGTTCCTGTACAGTAGCGTGTATGAGTGTGGCGACGTG
GTGGAGGAAGGCGGTCAGCTTGTGGGCCCTCTCGGTCGGCGTCAGCTCGGGCCGGTAATG
AGTTGAAGCACGATATCTGGCGCAGAGATAGAGCGTGTAGACGGGCGCGAGTTTGAACGC
CGGGGCATGAGGATCGAGCCTGGTGATGACCGCGGCGAGGAACTGTTGTTGTCCCGCCTC
CGGGAACTCCAGCACGGCCGGCAGGATCGCTTCTTGGCCGATTCGACCAGCACCCATCCT
GTTCTCGTGTCCTGAACCTCCGCTTTTAGCGCTACAGATGCTTTTCGTTTCAACGTTTCC
GTCTAAATCGAACGTGGTTTCGTAGTTATCTTTGTATTGCGAGTTCCCGGTGCGGTTCGC
GTTTGTGCTCTGATCGTGATCGTTGTAAATCGATCCGGTGTGTTCGTCCTTCGAGTCGGT
GAGGTGCTGCGACATCATCAGCGACTCGTTGTCGAGTTTGAGCGTGTTGTTGTTGTTGTA
CGGCGTGATCTCGTTCGAGTCTCTGTAGTAGTGGTCGTTCGAGACCGGGCTGACGGTGCG
GTGGTACTCGTCGTTGGCGTTGTTGTCGAGCGCGTCCGGTTGCTGGGACATCGCGCCGCC
CGGCTCCGGTGACGCGGGCGACCTGTCGTATATGGATCCGGAGCCGTAGTTTGACTGCGA
CTGAGCCAAGTTCCTGTTGATCAGGTTCTCCTGGGCGGGGTCCACGAAACGGAAAGTCGA
TACGCGCCCGAATTTCAGCAGACATCCGTGCTGTAATCGCTGTGTGTGCATGATCCTTTG
TCCGTTGACGAAGACTTGCGCGTCCGCGTGTAGCGGAGTCACGGTGTATCCGCCACCGTC
AGCGGGAGCGACCACGCAATGCCGGGATTGTATCGACGGTCCGTACAGCTGCAGGGCGGT
GCCATTTCCCGAACCAACCTCGACGACATCGGTAATCCGGATTCTGCGTCCATTCTCTAG
AGGCGTGGCGTCGGGCGCGACCTCCAGAAGTAAAGGTTCGTTGCCTGGACGCCCGTTGGT
GCCTGTGCCGACCTTCTTCTTCCGTCGCCGTGGCTGTGAGTCCGCCGGACGCCGCCGCAC
GTGGAACATGATAGAGCTCCGAGTCATATTCATCAGCGCCAACGGACACTCGTCATCTTC
CAGTATGTACTCCGTGTTGTCAGTCTTGTCTTCCTGAACGATACAAAACTGTTGAGGGTC
CTGATGTCCCATTCCGTATTTTTCGAGAGTTTCTTTAAGAACGGTCGCCGCCGAATCGTT
GACCGACAGGAGTAGCGTTATGTACGAAACATCGGGTCTCAGTATACCGCCGTAGATCCT
CAGCGTTCCTCCGGTATCGGGTCCTCCGTCTTTCGACTTGAACTGCTGTAGCTTGCGCCC
TAGCTTTTGTTGTCGACGACGACGCATCACCGCTTCAGGGTTACTGATGCTTCTCATGAA
CGATGTTTCCGGCAGTTCTGTGTAAAGTTTTTCGGCAACGGGTCGATTCTCATCGTTAGT
ATCAGACTTCAATCTCGACAGCTTCTCTTTTTTCTTCAATTCTTTTTTCTCTCTCTTGGA
TAATTTTCTTTTGAAGTTTTGGTCTCCCTTGTCGGATCCTATGACGGAGGCTTCATTGTT
AGTAAGGCACTTAAGTAGGAATCTCCCTTCTCTATCATCCGCGTGCCAGTTGAGTTGCAC
GAGGAGCGGCTTCTCGTGCGGCTCCAGCTGGCGCTCGTCGTCGGGGCCGTGGGTCTCCCA
CAACGAGTACGAGCCGAGTGACAGCATACGCATGTCCGGACGGAATTTCTCGATTAGTAT
CTCTATGACATCGCTGACGGTGGCGTCGGAGGCGACACGGATACACTTCGTTGCTATCTT
CTGACCCAGATCTTGGAAGTAGAAACGCATCACACCGTGGAACTCCAGATTCTCATTGGG
TTCGCTGAGCGCGAACAGATCGAGCCGGTTGGCGTTCCATTGGTGTATCATGTTGCGAAG
CGCTTCACGCTCCAACATACGCTTGTCCGCTGGGTCCATCGTGTCACCGCATCAAGTCCA
GTTTTTTAATGCAGGATATTCGTGGCTAGATGTCCATTGACAGCCGTGAGTGTAGCAAAA
ATCTACGCCATACTAGTAACATCTTCAAATGTAAGCACAATCATTTTTTTACGTAATCTA
ATAACAAAAACACCAGAACAATCACTTCAAAAACTTTTCTGTAATACAAAACTTTTAACT
ACAAGTACTTCAGAGAACCGTTAACACTTATCACAAGTTAATCACAACACAACAAGATTA
CCGGCTTCAGACTGATTTATTTTTAATTACCACAATTATGTAAATACAATATCATTGTTA
ATTTTTTTTGAATTCGATGACGTTATTA
(3748 bp)

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