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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40811_c0_seq2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_Nedd-4_isoform_X2_[Bombyx_mori]
Ontology
GO:0002092 P positive regulation of receptor internalization
GO:0004842 F ubiquitin-protein transferase activity
GO:0005112 F Notch binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007528 P neuromuscular junction development
GO:0016199 P axon midline choice point recognition
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0017022 F myosin binding
GO:0019904 F protein domain specific binding
GO:0031623 P receptor internalization
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0051965 P positive regulation of synapse assembly
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:3.74 TPM:2.96
ORF EntryO_BomoMG21307_complete:A_BomoMG_comp40811_c0_seq2
Sequence
(Nucleotide)
CTATAGAGCCGTTTTTTAGTTATCGTTTTTTCTCGTTATTTTAACATTTTTGTGATGTAA
AAAGTGGAAATGAAAAGTGATGAGGTGTTTGTATGCAGTTTTTTTGAGAAATGTTAGATT
CACGTACGGTTGCAGTGATGCATAACGCTAGGCCTCTCGATGTTGCTGAAACAGGTGAAC
GTCACAGAAATCGGTCATCATCGTGGACGTCAAGGCGATGGCAAAATGGTCTTTTCAGAC
AGGAACCAAGATATTCACTGCAATGTCAGACTGATGAGAACAGCTTCCTGCTTCGTCTGA
AGATAATAGGAGCTAATTCATTGGCGAAAAAGGATATATTTGGTGCTAGCGATCCATATG
TCCGCGTCGAGCTGCAGAAGGTGGACGGTGACGTCACGATTGAAACATTCCTTACTAAGA
CGAAGAAAAAGACATTAAATCCAGTATGGAATCAGGAGTTTATATTTCGGGTGAAACCTC
AAGAGCACAAGCTGCTGATACAAGTGTTCGACGAGAACCGTCTGACGAGGGACGACTTTC
TGGGCATGGTCGAGGTGCCCCTGGGGTCCGTGCCGGCCGAGTCGGCGGCCAGCGCTCGGC
CCAATGTCGTTAAGTACCCGTTGCGACCGCGCAGTGCAAGATCGAGAGTGCGTGGCTACA
TCGAGGTGTACCACGCTCTGGTCGGCAGAGTAGGTGATCCCGCCACGGACGAGGCCGCCA
ACCGCACCGCCGACGACTGGGAGATGGTGGAGCCTATCAACCAAGTCGGAACCGTGCAAC
CGACGATAGGAGGCGACGCTTTGCCGCCGGGCTGGGAAGAGAGACAGGACGCTAATGGCA
GAACGTATTACGTGAATCACATTGAGAGGACCACGCAATGGGAAAGACCAACTTTCACTC
GTCACATGAGCGTGGAGTCCCAGGCCGAGAGGATAGAGAACGCCGCCACCGAATTCCAGA
GGCGGTTTCACATCTCGGCAGACGAGGAGCGAGCCTCCAGCCCGGCGCCTGCGCCCCAGC
AGGGGGATGTAAACAGTACGAACTCGGAAGTGACGTCAGCCGAAGAAACCCCGTTCGCCA
CGCCCGATAGGTCGCCGGAATTGAGGAGAAACGAAAACGAACCAGAGCCAAGGATAGCGA
CTAACATTAGTGTAACCGACTGTGATAATATTGATAGTAGTTTAAGCAATAATGATACAA
GAGAAGACGACGACGTTGTCTGCGCTAATGAGATTAGCAGGGACGAAGCTGTCAATGAGA
CGGTCAATACGGAAGCCGATGAGACAGAAAGAGACGGAAACAACACAAACGCTCAAGACG
ACGCAGACGATAACGATCAGGCTAGTCAAGACACCGTCGACAATGGAAACGTTCTACAGC
AAACCGAGAACAATGGAAACGATCTTAACGATGAAACAACGAACGAAGCGCGCAGCGAAC
AACCAGTTATAGAAGACACGTTGACGTTCGACGAGAACCACTTTAGTACGCCGACAGGCG
GGGTCTCTCCGGAGAGGTCGCCGCGGACACGACGCCGGAGGACCACGACCAGCTCGATGG
AGGACTCGGAGGACGAGACCGATGGCTCCACCGAAAGCACGAGGAGTAGCGCCAGCAGCA
GCCAGAGTCAGAACTTGCCCAGCAGTGAAGGCTTACCTCCTGGTTGGAGTATGCAGAGAG
CGCCCAACGGCAGGATATTCTTCATTGACCACAACAAGAAGACCACCACGTGGATAGATC
CCAGAACCGGTTGCGCGTCCAGCCTGCCCAGCGCGGAGGCGGGCGGTGCGGGGGGCGCGG
GGGACGGGGACGAGCTCGGCGCCCTGCCCGAGGGCTGGGAGGAGCGCGTCCACACCGACG
GCAGGATATTCTTCATCGACCACAATACGCGTACCACACAATGGGAGGACCCTCGCCTCT
CCAACCCTCAAATCGCTGGACCGGCCGTGCCTTACTCGAGAGATTACAAACGGAAATACG
AATACCTTAAGAGTCAACTTCGTAAGCCTAACAACGTGCCAAACAAATTCGAGATAAAAG
TGCGTCGGAACTCGATATTGGAAGACTCGTACCGCATCATCAGTTCGGTTAGCCGGCTGG
ATCTGCTTAAGACTAAGCTGTGGGTCGAGTTCGAATCCGAAGTGGGGCTAGACTACGGCG
GCCTTGCCCGCGAGTGGTTCTTCCTGCTGTCGAAGGAGATGTTCAATCCGTACTACGGCC
TGTTCGAGTACTCCGCCATGGACAACTACACGCTGCAGATCAACCCGAACAGCGGCGTGT
GCAACGAGGAGCACCTCAACTACTTCAAGTTCATCGGCCGCGTGGCGGGCATGGCCGTGT
ACCACGGGAAGCTCCTGGATGCGTTCTTCATTCGACCGTTCTACAAGATGATGCTGGGTA
AAGCCATCGATCTACACGACATGGAGTCCGTGGACTTGGAATACTACAACTCTCTGATGT
GGATCAAGGAGAACGATCCGTCGGAGCTATACCTGACGTTCGCTGTGGACGAGGAGCAGT
TCGGCAAAACCGTGCAGAGGGAGCTGAAGCCGGGCGGCTCCAACATACCCATTGACAACG
ACAACAAGCTGGAGTACATCAAGCTAGTGATAGAATGGCGGTTCGTTAGTCGAGTCGTGG
AGCAGATGGTCGCCTTCCTGGACGGGTTCGGGGCGCTGGTGCCTCTGCCCCTGCTGAAGA
TCTTCGACGAGCACGAGCTGGAGCTGCTGCTGTGTGGCATCCAGCACATCGACGTCCGAG
ACTGGCGCTCCAACACGCTGTACAAGGGAGACTACCACGCCAACCACCTCGTTGTGCAGT
GGTTCTGGAGGGTGGTGCTGTCGTTCTCCAACGAGATGCGGTCCCGGCTGCTGCAGTTCG
TGACGGGCACGTCGCGGGTGCCCATGAACGGCTTCAAGGAGCTGTACGGCTCCAACGGGC
CCCAGCTCTTCACCATCGAGAAGTGGGGCTCGCCCGAGAACTACCCGCGCGCGCACACCT
GTTTCAACCGTATCGATCTACCGCCGTACGAGAGCTACCAGCAGCTCAGGGAGAAGCTGA
TCAAGGCCATCGAGGGCTCGCAAGGGTTCGCCGGAGTCGACTGAACGACGTCGCCAAACC
GAGACCCTGATCAACTAACAAAAGACAAGAACTCCTGAAGGGCATGACTTAGGTTGTGTT
CAGGGTACAAGCGAGACGAACCCGGGCCAATGAACGTGCTACAAATATTAATTACTTTTA
TTTACACCGTCTGGTGTTCTTTCAAAAAATTAATTAATTACCTTTGTTTCGATTCAACGC
AAAATATAATATTTTATTTGTTCTCATAACACTTGTGTACTTAAGTGCAAACTTCAAGGC
GTATCTACATTTAGAAGACATTTCGATCTCGGGACGTGCGCGGGACATTCATGACGGAAC
ACATAATTCACTAGTAGAACTACCGTTTTAGTAGATGCATAAGCGCTCGCGCGAGGTCAT
TTACCCCCCCTTTTTATGACGTCACCCTCAAAATTAAACATCTGTTTGTATTGCATTTAA
TGTCATTGCGCGAGCACTATGACCGAGCTATGTTCACGAAGCGGTAAAAAACAATAAGCT
AAAATCTGAGTATGTGTTCTTAAAAACCTTTCGCATGTCCACTTCAAGTCTATAGTATAG
TACGCTTTATAATTAACATTTACCAATAAAAAATATTTGTAACTCTATAAAAGATATGGG
TTCGCATTTCTATATTGCGACGAATTTTGCGCGCTTCTTACACGCGTGCACTCTATCGTG
TAGCGATAAGACTTAAATTTAAATATAACAAGATTCTGTTATGTTGGCCATAATCAGAAA
TTGAGGGGACGAATTAAGTAAGGAGTTTGTTAGTCGTCAACGAATTTCTGTGAGGAATAG
TAACTCCGGCGCTAGTTTTTGCCATAAAAAAGTTTTGTTTTTTAATTTACGTTCCTTAGA
GTTTTTAATGCCCTCCCATACTTTACAAATAGTATCTAAATTTATTTAAAAATAATAATA
ATTATTATTATTTTTAAATAAATTTAGATACTATTTGTAAAGTATGGGAGGGCATTAAAA
ACTCTAAGGAACGTAAATTAAAAAACAAAACTTTTTTATGGCAAAAACTAGCGCCGGAGT
TACTATTCCTCACAGAAATTCGTTGACGACTAACAAACTCCTTACTTAATTCGTCCCCTC
AATTTCTGATTATGGCCAACATAACAGAATCTTGTTATATTTAAATTTAAGTCTTATCGC
TACACGATAGAGTGCACGCGTGTAAGAAGCGCGCAAAATTCGTCGCAATATAGAAATGCG
AACCCATATCTTTTATAGAGTTACAAATATTTTTTATTGGTAAATGTTAATTATAAAGCG
TACTATACTATAGACTTGAAGTGGACATGCGAAAGGTTTTTAAGAACACATACTCAGATT
TTAGCTTATTGTTTTTTACCGCTTCGTGAACATAGCTCGGTCATAGTGCTCGCGCAATGA
CATTAAATGCAATACAAACAGATGTTTAATTTTGAGGGTGACGTCATAAAAAGGGGGGGT
AAATGACCTCGCGCGAGCGCTTATGCATCTACTAAAACGGTAGTTCTACTAGTGAATTAT
GTGTTCCGTCATGAATGTCCCGCGCACGTCCCGAGATCGAAATGTCTTCTAAATGTAGAT
ACGCCTTGAAGTTTGCACTTAAGTACACAAGTGTTATGAGAACAAATAAAATATTATATT
TTGCGTTGAATCGAAACAAAGGTAATTAATTAATTTTTTGAAAGAACACCAGACGGTGTA
AATAAAAGTAATTAATATTTGTAGCACGTTCATTGGCCCGGGTTCGTCTCGCTTGTACCC
TGAACACAACCTAAGTCATGCCCTTCAGGAGTTCTTGTCTTTTGTTAGTTGATCAGGGTC
TCGGTTTGGCGACGTCGTTCAGTCGACTCCGGCGAACCCTTGCGAGCCCTCGATGGCCTT
GATCAGCTTCTCCCTGAGCTGCTGGTAGCTCTCGTACGGCGGTAGATCGATACGGTTGAA
ACAGGTGTGCGCGCGCGGGTAGTTCTCGGGCGAGCCCCACTTCTCGATGGTGAAGAGCTG
GGGCCCGTTGGAGCCGTACAGCTCCTTGAAGCCGTTCATGGGCACCCGCGACGTGCCCGT
CACGAACTGCAGCAGCCGGGACCGCATCTCGTTGGAGAACGACAGCACCACCCTCCAGAA
CCACTGCACAACGAGGTGGTTGGCGTGGTAGTCTCCCTTGTACAGCGTGTTGGAGCGCCA
GTCTCGGACGTCGATGTGCTGGATGCCACACAGCAGCAGCTCCAGCTCGTGCTCGTCGAA
GATCTTCAGCAGGGGCAGAGGCACCAGCGCCCCGAACCCGTCCAGGAAGGCGACCATCTG
CTCCACGACTCGACTAACGAACCGCCATTCTATCACTAGCTTGATGTACTCCAGCTTGTT
GTCGTTGTCAATGGGTATGTTGGAGCCGCCCGGCTTCAGCTCCCTCTGCACGGTTTTGCC
GAACTGCTCCTCGTCCACAGCGAACGTCAGGTATAGCTCCGACGGATCGTTCTCCTTGAT
CCACATCAGAGAGTTGTAGTATTCCAAGTCCACGGACTCCATGTCGTGTAGATCGATGGC
TTTACCCAGCATCATCTTGTAGAACGGTCGAATGAAGAACGCATCCAGGAGCTTCCCGTG
GTACACGGCCATGCCCGCCACGCGGCCGATGAACTTGAAGTAGTTGAGGTGCTCCTCGTT
GCACACGCCGCTGTTCGGGTTGATCTGCAGCGTGTAGTTGTCCATGGCGGAGTACTCGAA
CAGGCCGTAGTACGGATTGAACATCTCCTTCGACAGCAGGAAGAACCACTCGCGGGCAAG
GCCGCCGTAGTCTAGCCCCACTTCGGATTCGAACTCGACCCACAGCTTAGTCTTAAGCAG
ATCCAGCCGGCTAACCGAACTGATGATGCGGTACGAGTCTTCCAATATCGAGTTCCGACG
CACTTTTATCTCGAATTTGTTTGGCACGTTGTTAGGCTTACGAAGTTGACTCTTAAGGTA
TTCGTATTTCCGTTTGTAATCTCTCGAGTAAGGCACGGCCGGTCCAGCGATTTGAGGGTT
GGAGAGGCGAGGGTCCTCCCATTGTGTGGTACGCGTATTGTGGTCGATGAAGAATATCCT
GCCGTCGGTGTGGACGCGCTCCTCCCAGCCCTCGGGCAGGGCGCCGAGCTCGTCCCCGTC
CCCCGCGCCCCCCGCACCGCCCGCCTCCGCGCTGGGCAGGCTGGACGCGCAACCGGTTCT
GGGATCTATCCACGTGGTGGTCTTCTTGTTGTGGTCAATGAAGAATATCCTGCCGTTGGG
CGCTCTCTGCATACTCCAACCAGGAGGTAAGCCTTCACTGCTGGGCAAGTTCTGACTCTG
GCTGCTGCTGGCGCTACTCCTCGTGCTTTCGGTGGAGCCATCGGTCTCGTCCTCCGAGTC
CTCCATCGAGCTGGTCGTGGTCCTCCGGCGTCGTGTCCGCGGCGACCTCTCCGGAGAGAC
CCCGCCTGTCGGCGTACTAAAGTGGTTCTCGTCGAACGTCAACGTGTCTTCTATAACTGG
TTGTTCGCTGCGCGCTTCGTTCGTTGTTTCATCGTTAAGATCGTTTCCATTGTTCTCGGT
TTGCTGTAGAACGTTTCCATTGTCGACGGTGTCTTGACTAGCCTGATCGTTATCGTCTGC
GTCGTCTTGAGCGTTTGTGTTGTTTCCGTCTCTTTCTGTCTCATCGGCTTCCGTATTGAC
CGTCTCATTGACAGCTTCGTCCCTGCTAATCTCATTAGCGCAGACAACGTCGTCGTCTTC
TCTTGTATCATTATTGCTTAAACTACTATCAATATTATCACAGTCGGTTACACTAATGTT
AGTCGCTATCCTTGGCTCTGGTTCGTTTTCGTTTCTCCTCAATTCCGGCGACCTATCGGG
CGTGGCGAACGGGGTTTCTTCGGCTGACGTCACTTCCGAGTTCGTACTGTTTACATCCCC
CTGCTGGGGCGCAGGCGCCGGGCTGGAGGCTCGCTCCTCGTCTGCCGAGATGTGAAACCG
CCTCTGGAATTCGGTGGCGGCGTTCTCTATCCTCTCGGCCTGGGACTCCACGCTCATGTG
ACGAGTGAAAGTTGGTCTTTCCCATTGCGTGGTCCTCTCAATGTGATTCACGTAATACGT
TCTGCCATTAGCGTCCTGTCTCTCTTCCCAGCCCGGCGGCAAAGCGTCGCCTCCTATCGT
CGGTTGCACGGTTCCGACTTGGTTGATAGGCTCCACCATCTCCCAGTCGTCGGCGGTGCG
GTTGGCGGCCTCGTCCGTGGCGGGATCACCTACTCTGCCGACCAGAGCGTGGTACACCTC
GATGTAGCCACGCACTCTCGATCTTGCACTGCGCGGTCGCAACGGGTACTTAACGACATT
GGGCCGAGCGCTGGCCGCCGACTCGGCCGGCACGGACCCCAGGGGCACCTCGACCATGCC
CAGAAAGTCGTCCCTCGTCAGACGGTTCTCGTCGAACACTTGTATCAGCAGCTTGTGCTC
TTGAGGTTTCACCCGAAATATAAACTCCTGATTCCATACTGGATTTAATGTCTTTTTCTT
CGTCTTAGTAAGGAATGTTTCAATCGTGACGTCACCGTCCACCTTCTGCAGCTCGACGCG
GACATATGGATCGCTAGCACCAAATATATCCTTTTTCGCCAATGAATTAGCTCCTATTAT
CTTCAGACGAAGCAGGAAGCTGTTCTCATCAGTCTGACATTGCAGTGAATATCTTGGTTC
CTGTCTGAAAAGACCATTTTGCCATCGCCTTGACGTCCACGATGATGACCGATTTCTGTG
ACGTTCACCTGTTTCAGCAACATCGAGAGGCCTAGCGTTATGCATCACTGCAACCGTACG
TGAATCTAACATTTCTCAAAAAAACTGCATACAAACACCTCATCACTTTTCATTTCCACT
TTTTACATCACAAAAATGTTAAAATAACGAGAAAAAACGATAACTAAAAAACGGCTCTAT
AG
(8042 bp)

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