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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40799_c1_seq12
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0008298 P intracellular mRNA localization
GO:0010494 C cytoplasmic stress granule
GO:0016020 C membrane
GO:0030425 C dendrite
GO:0030529 C ribonucleoprotein complex
GO:0036464 C cytoplasmic ribonucleoprotein granule
GO:0044297 C cell body
GO:0044822 F RNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0046726 P positive regulation by virus of viral protein levels in host cell
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:5.22 TPM:4.12
ORF EntryO_BomoMG21248_3prime_partial:A_BomoMG_comp40799_c1_seq12
Sequence
(Nucleotide)
CTTTGCTGCAAAAATATACACATATTTTTTAAGCCTGAAATGTACATTTATTTTCAAAAG
TGGTAAAGGTATGACTAGATGGGAGTATTGAGAGAAGCATAATATTATCTTAATAAAGCA
TAATTTGATGTTTGGCAGTTAACAAGACAAATAATTTAATTTCTGAATGTCGTGATATTC
CCACAGTCAGGGCCCCAACACCAGGCCACATTTGAGTTCCGCTGTAAGGCTTTAGGTGAG
TCTGTCTCTGCTTCTGCACGATCAAAGAGGGAAGCAAAGCAGGAAGCAGCCCGTGCCATG
CTGTTGTGTCTTTCTACAATAGGTCACCGTGTACCCCCACCATTTGCTACTGAATTTACA
CAACCCTCTCATAGTAACCAATCGGCTGGCGAGTGCTCCGAGGGCAAAGCGCCCACAGTG
GACAGTCGCAGCTATGTGGCGCTGCTGAAGGAGCTGTGCGAGGAGTACAAGCTGCCGGGC
GTGGAGTACGCGCTGGTGGCGGACACTGGGCCCGCGCACATGCGCCTGTTCAGCGTGCGC
GCCAGCATCGGCCTGCACTCGCGCGACGCCAGCGGCACCACCAAGCGACAGGCGCGACAA
AAAGCCGCAGCCGACCTCTACTTGTTCCTGCGTGAAAACCTCTCGCGTCTCACTCATGAT
TTCGTTGAGGAACAAGCGCTGGTGCGAGCCCACGAGCGCGCCATGGAGCGGTTGGTGGAG
ACCACTCCCGCGCCCTGGAAGCCGGACCTCGGCCAGCGCGTCTCCGAGTACCATTACGGC
CTCATCTCGCACACGGATCCCGAAAAACGCATGGCGGCTCGAGCCGTGCTATCCGAGACG
GACGACATAGAGGAGGCGGCTGAGCGCGCGGCCGCGGCGCTGGAGCTGCAGACGTGCTGG
GAGACCCTCGACCCGCTCCACGTGCTGAAGCTAGATGCGG
(940 bp)

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