SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40790_c0_seq2
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_2-like_[Papilio_xuthus]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048511 P rhythmic process
Transcript
Level		FPKM:12.24 TPM:9.67
ORF EntryO_BomoMG21109_5prime_partial:A_BomoMG_comp40790_c0_seq2
Sequence
(Nucleotide)
TCAGGCTCGTCTAGTTCGCGGTCGAATTCCAATTCCGATCTGTCGATTAACAAAACGGCG
TCAGAAAGCAGTATTTCGAAGTATCTTCACGATAAACCTAACGGCGCGAGTACGGTCTTA
ACGTCGAAAATCCCGCCCGACCATTTGACGAGCGTCAAAAGTCAACTAGACCCCAACAAT
CCAATAGGGAAGATTCTAGAGAAATCGACCGTGATCCAAGTTCAAAATGGGGACGTAGAT
TATGCGGAACGCAAGAGAATACGCAACAGTCCCGAAACGGTTAACAAATCGAAAGACAAC
ATTAAAAACGACATTGAAAAACAGGTCAAAAGTCAAAGGCACACGTCCGATTTCGCTTCG
TACATACAAATATCGCAGCCGATCGCCTCGGGCACGTCCGCGCTAAAGAAAATTGAAAAT
CACGTTAACGAGGAACCCGTGCCCACAGAGACGCGTAAATCTAGAGCCGGCCTCAAATAC
ATAGATTCCGAGCAAGAGAATGTATCGCTGAACAATGAAATCGAATCTCCAAGTGAGACG
GGCTTCGAAAATAAGACCTTCGAACACGAGAATTATCTTAAGAAGCGCTCGGAGAAGAGC
GAAGGAGACTCGAAAGAGGAGGATGGAGCCAAGTCCATGGAGACCAGCGTTGAGAGTACT
CTGAGCGAATTGACCGAAGATTCTAGTCCTGAAACTCCGTCTACAAGAAGGAAGCTCTTG
GATAAAGAATACGATGATGTAAAAGGGGAATTGGCCGGAGGCAAAAGCGGTCCTAGCGGC
CTGCGCCGGAGCACCGATCGATCGGAATCACTCTCCGAATCCAGGAATGAGCGGCAGTCA
AGTCACACCAGTGGTCTGAACGGCCTCAGGAACATCGGCAACACGTGTTTCATGAATAGC
GTCCTCCAGTGCCTGTCGAACACCAAGCCGCTGCTGGAATACGTCTCCGAAGACAAGTAT
TGCGATGACATCAACACTTCGCTGTCCTGCATGAAGGGGGCCCTCATCAAAGCCTTCGCG
ACGGTCATCAAGGAGGTGTGGCGCAGTGGTGAGCGTGACGGAGTCGTGAACACCACCGCC
CTGAAGTCCCAGGTTCAGAAGTTCGCGCCGCGCTTCATGGGCTATAGCCAGCAGGACGCG
CAGGAGTTTCTTCGTTATCTACTGGAAGGGCTCCACGAGGACGTGAACAGGGTCACAGTC
AAACCGAAGCCTATATTGACGGAGATCGACGACAATCTAAGCGATTCAGCCAAGGCAGCC
GAAGCGTGGAGCCGCTACCTGAGGATGGAGGACAGCCGCGTGGGCGACATCTTCGTGGGG
CAGCTGAAGTCGACCCTACGCTGCACCCACTGCAACCACGACAGCGTCACCTTCGATCCA
TTCTGGGACCTGAGCCTGCCGATTCCGGCCCGGACCGGCAACCTGAAGCTGCAGCAGTGC
CTACAGCACTTCGTGCGCGAGGAAGAGCTGGACGGTGACGAGAAACCGACATGCTCGAAG
TGCGGCGTGAGACGGAAGTGCCTCAAATGGTTCACGGTGCAGAAGTTCCCTCAAGTGCTG
GTCTTGCATCTCAAAAGGTTCTCCCCGACGGAGCGGTTCCGCGGCAAGCTGAGCGTGGTG
GTGGAGTTCCCCCTGAGCGGCCTCGACATGTCGCCCTACGCCGCCGCGCGGTCCGGCGCG
CCCGTCTACAACCTGTACGCCGTCAGCAACCACTCCGGTACAACGTACTCCGGCCACTAC
ACGGCGTACTGCAAGCACCCGCACACCGGCGACTGGCACGAGTACAATGACTCTAGGGTA
ACGCCCATCAACCCGTCCAACGTGGTTTCGTCGGAGGCCTACGTGCTCTTCTATGAGCTT
TCACGTACGTAGCGAAAGCTCAAAGCCCGCCCGCTCGCTGGCTCCGCGCGCCAGTGACAG
TTGACAGTGACACGCGTCACGCTGGACGACGGGCAAGGGGGTCGTGACACTTGATAAATG
TTTTTTTTTTATACTCTTTTGTTTTGCTGACGGTACTTTTTTGTGAGTGGAGTTTTTTTT
TATAAAACGAATAAATTATTTTGTTGTTGAAAATGAATCGTCCAGTAGAATGTCGGGTAA
ATAGTGGTGGGTGTGGCGTTCGATCATGCGATGGCGTCGCGGGGTCGCGTGTTCGAGCTC
CGACGCGACCAGAATACGGACGACAATGTTTAAAGGGAAAATCTTTTAGTCCTCCTTTTG
GAGACACATTTTTTTATTTCGAACGCTACAATCAATTTTTTTTAATAAAACTCGAATCCG
CGATCCCGTTTTCGGAGAGCACATGTTAACTAAGTCAGCTGGTAGTTTCGTTTGGAAGCT
CAATAGCGTTTTTGACGGGGCTTATAAATTCGAAGAGTAACTATAAATAATCCTTTAGTA
TAACTTACATTTTCTATCTGACGGTCATGACTTAGTAATTATAAACAAGAATTCAATGTA
CGGTCCCGTTGTGCTTCAGACGAAAATAATATTCATGTACATTTAACCAAGTTAATAGTA
AGATTAGTGATTTAATTTTTTTATTTGCATTGCGCATTTACATTGCGTTTTTAGTTGGGA
ATAAAATTAGCACTCCATTGCTCGCTCTCCGCGTTCACTCTTGTAATTTATAAGCCCGAA
TATCAACGTGCGCTGTTGTTGTCCGCGGGCGACTGATCTGAACCGTCAAGTGTCCTTCTC
GCTTGTCTTAAAGTTTGACCGCAAAAGTATTTTTTTTTTTTCGTTTTAGAGCATTACACA
CAAAAAATATGAAGCCTTATCCCGTCAATGATTGTAAATGAACACACAGTGACACTGCAA
TTATATTATTTACATTTGAAATTCCTATCAATTTTAGTCATTTTGTAAATAAATAAATTA
ATATTAATAATATTATTAAAAAAAAAGCTTTTATAAAAT
(2919 bp)

- SilkBase 1999-2023 -