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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40766_c1_seq2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		Thrombospondin_[Operophtera_brumata]
Ontology
GO:0002020 F protease binding
GO:0003417 P growth plate cartilage development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0006915 P apoptotic process
GO:0007155 P cell adhesion
GO:0008201 F heparin binding
GO:0031012 C extracellular matrix
GO:0043066 P negative regulation of apoptotic process
GO:0043395 F heparan sulfate proteoglycan binding
GO:0060173 P limb development
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.65 TPM:0.51
ORF EntryO_BomoMG20947_complete:A_BomoMG_comp40766_c1_seq2
Sequence
(Nucleotide)
AAAAATAGCTAATTTGTGCCTAGAATATATTTGTTTGATTTAGGAGTACCGTGCCAGGAC
TTACCAGACGGCAGATACCAATGCGGCAAGTGCCCTTCTGGGTTCCACGGGAATGGAGTC
GAGTGCTATAGGATATCCTGCAGAGCAAACACGTGCTTTCAAGGTGTGAGCTGCGAGGAG
ACCCAATATGGTCCTAAATGCGGGTCCTGTCCCACTGGGTACGTGGGAGACGGTCGGCAG
TGCCAGCACGTGTGTGACGCTCAGAAGCCCTGCGGTAGAGAGCGACGCTGTATGCCCAAA
AGTACCAGCCCTTATTACGAGTGTGAGGGATGTCCCAGCGGCTACCAGTGGAATGGGTAC
ACGTGCGTGGATATGGACGAATGCGATTTGATTCGGCCCTGTGATGATCTGGTCTCGTGT
CGCAACGAAGAAGGCGGCTTCACCTGTGGGCCGTGTCCTCCAGGGTTCACAGGTAGCCAG
GGCTGGCGGGGCACTGGCAATGAGAGACGAAGGGAACATTGCGTGGATGTGGACGAGTGC
GCTGACGGACGAGCCAACTGTCCAAGAGGACGGCTTTGCGTCAATACCCCGGGCTCATAC
ATCTGCGTTCCCTGCGGCGGGCACTACTACGTGAACACGACGAGGCCGTGCTTCGACCCG
GACTCGCTGGTGAAGCGGTGCGACCCCAGCTACTGCAGGCGATTCAACGCCGTCTGTGGT
TTCGGACAAAAGTGCGTTTGTAATACCGGTTGGACTGGCAACGGTACAGTGTGCGGACTG
GACCGAGATCTAGACGGGCATCCGGACGAGCAGCTGCCTTGTAATGAGCCTCGCTGCAAG
AAGGACAACTGCCCCGACGTCTCCAACTCCGGGCAAGAGGACGTGGACGGTGACGGCATC
GGGGACTCGTGCGATTCTGATGCAGACGGAGACGGGATTCCCAATTTTCCTGACAACTGC
CCGTTGACCCCCAACCCGGACCAGTTGGACGACGACGAGAACAAATCGGACGAGAGAGGA
AACGCCTGTGACAACTGTCCCCGGCACTACAACCCTCGCCAGGAGGACACCGACGGAGAC
GGAACGGGAGACGTCTGTGATTCGGACATGGACGATGACGACATACCGAACCAAGTGGAC
AACTGCCCCAGGAAGTACAATCCGCAGCAAGACGACATGGACTCGGACGGCGTCGGCGAC
GTCTGCGACAACTGCCCCCGCGTCCGCAACACGAACCAAGAGGACACGGACAAGGACAAC
GTCGGCGACGCGTGCGACAGCGATATAGACCGTGACCAAGACGGGATACAAGATGGCTTA
GACAACTGCCCGCTGATACCGAACAGCGACCAACAGGACGTGGACCGCGACGACAAGGGC
GACGTCTGTGACGACGACGACGACGGAGATGGGATACCGGATCTGGACGACAACTGCCAG
ATCGTGCCCAATAGGGATCAAAAGGACTCTGATAATGACGGCATTGGAGACGCCTGTGAC
AATGACAATGACGGCGACCGGGTCATCAACGAGCTGGACAACTGCCCGAACAATTCGCAG
ATATTTCGAACGGACTTCAGACAGTTCACCACAGTCCGATTGGACCCTGAAGGCGAGTCT
CAACAGGAGCCCAACTGGAGGGTGACGGACAACGGAGCTGAGATCCTGCAGACCCTGAAC
TCGGACCCTGGTCTGGCGGTCGGATTCGACAGCTTCGGCGGAGTCGACTACGAGGGGACC
ATCTTCGTCAACACAAAGATAGATGACGATTATGTTGGATTTATTTTTGGATACCAAAGC
AACAAGAGGTTTTATGTGGTCATGTGGAAGAAGGATAAACAGACTTATTGGCAGAAGACT
CCGTTCAGAGCGGTCGCCGAGAACGGCATACAGCTCAAGCTGGTCAACTCGAAGACTGGC
CCGGGGAAGATACTCAGGAACGCTCTCTGGAATACTAACTCTACCCCGGATCAGGTCACC
CTGCTCTGGAAAGACCCTCGCAACGTGGGCTGGCGCGAGCAGACGGCGTACCGCTGGAAG
CTCCTCCACCGCCCCAAGATCGGTCTCATCAGACTGAAGATGTACGAGAACAACCGCCTG
GTCGCGGACTCTGGGAACACTTACGACTTCACCCTGAAGGGGGGGAGACTTGGAGTGTTC
TGCTTCTCCCAGGAAATGATCATATGGTCTAATCTACTCTACAAATGTAATGATAAGATT
CCGGCGAGCATAGCATCGGAGATTTCAACAAGGAACCATTTCGAAATCGACCAAGATTAT
TTCACAAACGAGTAGCCACAGACGAACGGACGTGTCGATTAACATTTTTTATAATTAATG
CAATTAATCTGTAAATACTCTCGTTCGCGCAGAACGTGACGTACGGATGTGCTTATGTTA
GTTGTTAA
(2408 bp)

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