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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40766_c1_seq1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_cartilage_oligomeric_matrix_protein_[Papilio_machaon]
Ontology
GO:0002020 F protease binding
GO:0003417 P growth plate cartilage development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0006915 P apoptotic process
GO:0007155 P cell adhesion
GO:0008201 F heparin binding
GO:0031012 C extracellular matrix
GO:0043066 P negative regulation of apoptotic process
GO:0043395 F heparan sulfate proteoglycan binding
GO:0060173 P limb development
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:11.60 TPM:9.16
ORF EntryO_BomoMG20944_5prime_partial:A_BomoMG_comp40766_c1_seq1
Sequence
(Nucleotide)
GGTTGAATCTTTGAGTTGTGCAAAAGACAACATCAGACCTCCAACTCTACTGAGACTGGA
CGAACCTGAATCGGACGTAGAAGAAGTCCAAGAATTCAGAAAGAAGGAAGCTCTCATGGA
CAGAGAGGAAGAAATGCAAGGAGATGATGCTACTAATTATTTGGAAGCTAACGGTATTCT
GCCGCAACCTTCAAGAGGGGATATACCTCAGTCTGCCATTGAATCGTGTGATGATGAAGT
CATCCGTCAACTGACCCTACTGCGTCAGATCATCGAGCACTTGCGCCGGGAGGTCGGGGA
TCAGAAGCACACAATAGACAGCCTAAGGTCTCAACTCCACCAGTGCTGCAACAGAGTACC
CGTCACCCCGCCCCCCGTGGAGAGATGCTCCGGATCCTCATGCTACCCTGGGGTCGAATG
CCGGAACACTGTCGCGGGGTTCGAGTGTGGGTCGTGTCCGCGCGGCATGGAGGGCGACGG
CCGGAGGTGCAGACCCGTACTGTGTAACAGACGCCCATGCTCACAAGGGGAGAGGTGCGT
CGATACGGACCAAGGTTTCCGGTGCGAGAGATGCCCAGGGTCACAGACGAGTGATGGCCA
GACCTGCAGGACTGCGTGTAGCGCTAACCCTTGCTTTGGAGGACGAGTACCGTGCCAGGA
CTTACCAGACGGCAGATACCAATGCGGCAAGTGCCCTTCTGGGTTCCACGGGAATGGAGT
CGAGTGCTATAGGATATCCTGCAGAGCAAACACGTGCTTTCAAGGTGTGAGCTGCGAGGA
GACCCAATATGGTCCTAAATGCGGGTCCTGTCCCACTGGGTACGTGGGAGACGGTCGGCA
GTGCCAGCACGTGTGTGACGCTCAGAAGCCCTGCGGTAGAGAGCGACGCTGTATGCCCAA
AAGTACCAGCCCTTATTACGAGTGTGAGGGATGTCCCAGCGGCTACCAGTGGAATGGGTA
CACGTGCGTGGATATGGACGAATGCGATTTGATTCGGCCCTGTGATGATCTGGTCTCGTG
TCGCAACGAAGAAGGCGGCTTCACCTGTGGGCCGTGTCCTCCAGGGTTCACAGGTAGCCA
GGGCTGGCGGGGCACTGGCAATGAGAGACGAAGGGAACATTGCGTGGATGTGGACGAGTG
CGCTGACGGACGAGCCAACTGTCCAAGAGGACGGCTTTGCGTCAATACCCCGGGCTCATA
CATCTGCGTTCCCTGCGGCGGGCACTACTACGTGAACACGACGAGGCCGTGCTTCGACCC
GGACTCGCTGGTGAAGCGGTGCGACCCCAGCTACTGCAGGCGATTCAACGCCGTCTGTGG
TTTCGGACAAAAGTGCGTTTGTAATACCGGTTGGACTGGCAACGGTACAGTGTGCGGACT
GGACCGAGATCTAGACGGGCATCCGGACGAGCAGCTGCCTTGTAATGAGCCTCGCTGCAA
GAAGGACAACTGCCCCGACGTCTCCAACTCCGGGCAAGAGGACGTGGACGGTGACGGCAT
CGGGGACTCGTGCGATTCTGATGCAGACGGAGACGGGATTCCCAATTTTCCTGACAACTG
CCCGTTGACCCCCAACCCGGACCAGTTGGACGACGACGAGAACAAATCGGACGAGAGAGG
AAACGCCTGTGACAACTGTCCCCGGCACTACAACCCTCGCCAGGAGGACACCGACGGAGA
CGGAACGGGAGACGTCTGTGATTCGGACATGGACGATGACGACATACCGAACCAAGTGGA
CAACTGCCCCAGGAAGTACAATCCGCAGCAAGACGACATGGACTCGGACGGCGTCGGCGA
CGTCTGCGACAACTGCCCCCGCGTCCGCAACACGAACCAAGAGGACACGGACAAGGACAA
CGTCGGCGACGCGTGCGACAGCGATATAGACCGTGACCAAGACGGGATACAAGATGGCTT
AGACAACTGCCCGCTGATACCGAACAGCGACCAACAGGACGTGGACCGCGACGACAAGGG
CGACGTCTGTGACGACGACGACGACGGAGATGGGATACCGGATCTGGACGACAACTGCCA
GATCGTGCCCAATAGGGATCAAAAGGACTCTGATAATGACGGCATTGGAGACGCCTGTGA
CAATGACAATGACGGCGACCGGGTCATCAACGAGCTGGACAACTGCCCGAACAATTCGCA
GATATTTCGAACGGACTTCAGACAGTTCACCACAGTCCGATTGGACCCTGAAGGCGAGTC
TCAACAGGAGCCCAACTGGAGGGTGACGGACAACGGAGCTGAGATCCTGCAGACCCTGAA
CTCGGACCCTGGTCTGGCGGTCGGATTCGACAGCTTCGGCGGAGTCGACTACGAGGGGAC
CATCTTCGTCAACACAAAGATAGATGACGATTATGTTGGATTTATTTTTGGATACCAAAG
CAACAAGAGGTTTTATGTGGTCATGTGGAAGAAGGATAAACAGACTTATTGGCAGAAGAC
TCCGTTCAGAGCGGTCGCCGAGAACGGCATACAGCTCAAGCTGGTCAACTCGAAGACTGG
CCCGGGGAAGATACTCAGGAACGCTCTCTGGAATACTAACTCTACCCCGGATCAGGTCAC
CCTGCTCTGGAAAGACCCTCGCAACGTGGGCTGGCGCGAGCAGACGGCGTACCGCTGGAA
GCTCCTCCACCGCCCCAAGATCGGTCTCATCAGACTGAAGATGTACGAGAACAACCGCCT
GGTCGCGGACTCTGGGAACACTTACGACTTCACCCTGAAGGGGGGGAGACTTGGAGTGTT
CTGCTTCTCCCAGGAAATGATCATATGGTCTAATCTACTCTACAAATGTAATGATAAGAT
TCCGGCGAGCATAGCATCGGAGATTTCAACAAGGAACCATTTCGAAATCGACCAAGATTA
TTTCACAAACGAGTAGCCACAGACGAACGGACGTGTCGATTAACATTTTTTATAATTAAT
GCAATTAATCTGTAAATACTCTCGTTCGCGCAGAACGTGACGTACGGATGTGCTTATGTT
AGTTGTTAA
(3009 bp)

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