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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40747_c4_seq6
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:6.48 TPM:5.12
ORF EntryO_BomoMG20799_5prime_partial:A_BomoMG_comp40747_c4_seq6
Sequence
(Nucleotide)
TATCAAAAACTACGCATTGGTAGCTGCGCCTCTAACTGAACTTCTTAAGAAGGATCAAGA
GTGGATATGGAACGAACAAAGAGAAAAATCCTTCACACACATCAAGGAGCTCTTGCATAA
ACGACCCTTGCTCGCTCTGTATGATCCACTGGCAGAGACTGAACTCCATACCGACGCTAG
TAAACAAGGCTTAGCTGGTATCTTACTTCAACGTAACGAGAAAGGCGCCCGGCAGCCAGT
GTCTTATTTTAGTCGAAAAACCACCCCAGATGAACAGCGATACCATTCCTATGAACTAGA
AACCTTAGCTATTATAGCGTCATTAAATCGGTTTAGAATCTACCTTCTCGGCATACCTTT
TACTATAATTACCGACTGTAGCGCGATCCGCGCTACGCTTATAAAAAGGGACTTGGTGCC
TCGTATAGCGAGGTGGTGGATCCAACTCCAAGAATATGATTGCACTATTGAATATAGACC
CGGATCGAGGATGTCCCACGTCGACGCGCTCAGTCGTAATCCGATAGACACCCTAACAAA
TGAGGATCACGTCCTTGACGTACTAACCACTGAAACGGACGAACAAGATTGGATCACCAC
CGTACAATCTGCAGACGATGAAATTGCACAAATAAGGAATATTTTATGTAATCATGATAC
CGAGAATATAGCGAACGTATTTAAACATTTCAAATTAAAAAATGGGCGTATCTACCGTAT
TGTGGGCGATGAGATAAAGTGGGTCGTTCCAAAAGGGGCCCGGTGGCAGATCTTGAAGAG
AAACCACGATGATGTCGGCCATTACGGCTTTGAAAAGACTCTTGAACGTATAAGGAAACA
TTACTGGTTTGGACGCATGAGGCGTTTCGTAAAGAAATACGTATCGGCTTGTCTAGAATG
TGCTCATCACAAGGTACCAGGGGGTAAACGTGAAGGAGAACTGCATCCCATTGAAAAGAT
CGGCGTGTCCTTCCACACAATCCACGCAGACCACCTAGGACCTTTTGTCAGGAGCAAAGC
GGGGAACTGCTATATACTATCATTAATAGATAGTTTCACTAAATTTATAAATATCACTCC
AGTCAAAAACACGAAATCAGCGACTACAATCAAAGTCCTGAAAGACCACGTCAGTTTCTT
CGGAGTCCCAACGCGCCTCATTACTGATAGGGGGTCTAGTTTCACCAGTAAAATGTTTAA
AGACTTTACAAAAGATTGTGGAATAAAACATATATTAAACGCTGTCGCGACCCCGAGGGC
AAATGGTCAGATAGAAAGATTTAACCGAACCATAACAGAAGCATTAGCTACTTCGAATCA
TGGCCGTGATGAACGATGTTGGGACGAACGGATTCACGATATACAAATAGGTCTGAACAC
GACAATCCACAAGACAACGCAAAAGTCGCCATCCGAACTACTGTTCGGATTTAATATAAA
CCATAGAGCGGAAGGAATTTTGAGCACAATAATAAATGACACGCTTAATATAATACCACT
AGATGAGTTAGACTCCGTGAGAGATAATGTTTTGAAACGCATGGAAATTCAACAAGAAAA
AGATTCTGAGCGATTCAATAAAAATAGAAAACAGTGTAAAAAGTATGAAGTAGGAGATCT
AATCCGAATAGAAAGGCATGTGTCCAACGATGGTCACCCAAAGAAACTTTTAATGAAATA
TCAGGGTCCTTACCGCATCTTGAAAGTCTTGGAACACGATAGGTTTTTAGTCGAAGACAC
TCCGTTGTCTCGTAAGGGCGGTCGTCGTTACGAAGGTGTTGTCGCCATAGACAAAATTCA
ACCCTGGACAAGCTTTAATCGAAACTTCGATGATGACTCAAGCGAAGACGATGACGAGGA
TGACAAAGACAATGATGATGAAGACAGGAAGGATCAAGCGGGTAATTGACGTAGATGTAG
GCAGCAGTGATTAGAAGTGATTAGAATTAGGCAGAAGTGATTAGAATAGCAATGTAACCA
GTAACGTTAATGCTAATGAGATTCGCCTCGATTAAAAGTTGAGTCCGTCATAATAATGTA
ATACTTTAACTATGTTGTAAGGCATTGCAAGTAGACAGGAAGAGAGTGGTTGTTCCTGTA
TAACATACAAGCATCACGAAGGGACTTGTGATATTGCAGGAAGGCCGAGCTGTTAGGATC
ATTTTATTCAAATTACCTAATTAGAAACATAGTAAAATATTAATAGCAAACTCTGTTGAA
GTATGTTTAAAATATATTTATTTAGAATCAATCCTCGTGCCCATTATTTATGTAAATATT
AAAAGTAGGAAATAATAACAGACTAAGACTTATGATTATTTTATAACTTAAATTCTAATT
TCATAACTATCCTAAATTTTGTTGACTTCCGGCCTGGCACAAAGAGGCGGGGCGTGATGC
ACGCAAAATGGCGAACGACACACTGATTTAGCGAGGACGGAAGCAAGACGTACTTTACAA
AAGCGTATCGATTAAGACAATTAGTGTACTTTAAAACCTATTCAAAGTTGTGGAAATAAA
GGAAGTGTAATCAAACAGCATTTGGATTGTTTTTTTTTGGTGAAAGCCAAAAGTTCAGAA
GCGGGATCACCAAGAATACATAAAATTTTCTAAAGCGTCCACAAAATGTCCAGAAATATG
GAAGGAGACACCCGAGGTCAAGGGTCGGAATTCAGAGCTGCCCGAGGTCAAGGGTCGGAG
TTCGAAGTCGCCCGAGGTCAAGGGCTGGAATTAGAAGCCGCCCGAGGTCGAGGGTCGGAA
TTAGAAGTTGCCCGAGGTCAAGGGCCAGAATTCGGAGTT
(2799 bp)

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