SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40728_c1_seq8
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		Otoferlin_[Papilio_machaon]
Ontology
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0010996 P response to auditory stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016323 C basolateral plasma membrane
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0050885 P neuromuscular process controlling balance
Transcript
Level		FPKM:0.73 TPM:0.58
ORF EntryO_BomoMG20677_internal:A_BomoMG_comp40728_c1_seq8
Sequence
(Nucleotide)
GGCTCCATAGTTGGGATGGACGTGCTTCAATCGCGAAACATTTTGCGCGCCAACAAGCTT
TTGGGTAGCTTCAAGCTGGACGTAGCCACGGTGTGGAGCCAGACAGACCGCCAGTTCTAT
CACAAATGGGCCTTGCTGACTGACCCTGATGATGTAGCCGCCGGGGCTAAGGGCTACCTG
AAGTGCGACATTAGTATAATTGGTAAAGGCGACACGATCAAGATCCCACCGAAGAGCGAA
AAAGACGAGGATGACATCGAAGCCAATTTGCTGCTACCCGACGGCGTGCCAATTGAGCGT
CAACGAGCTAAGTTTATCGTCAAAGTGTACAAGGCCGAAGGACTTCCGAAGATGAACTAC
TCTATAATATCGAATGTGAAACGAGCCTTCACTGGAGAGAGCACGGAATTAGTCGATCCG
TACGTCCAAGTCAGCTTCGCTGGAATGACAGGGAGCACATCAGTTAAGAAGAACTGCTAC
GCTCCAGTGTGGAACGAGCAGATAATATTTACGGAGATGTTCCCACCGCTCTGTCAACGT
ATCAAGGTCCAGCTTCGGGATAATGCTCCGGTCCATCCTAACATTATCGGCACGCACTTC
ATTGACCTCAAGACAATCTCCAATGACGGAGAACGCGGGTTTTTGCCAACGTTTGGTCCA
GCCTACGTATACATGTACGGCTCAACTCGAGACTACAGTATTATTGACCAGCACGCGAAC
CT
(722 bp)

- SilkBase 1999-2023 -