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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40726_c0_seq3
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		heat_shock_factor-d_[Bombyx_mori]
Ontology
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:1.44 TPM:1.14
ORF EntryO_BomoMG20652_complete:A_BomoMG_comp40726_c0_seq3
Sequence
(Nucleotide)
GGCGATCTGAGCAGTGTATTGCCGAACTTGATAATTTTCTTAAAAAATACCGTGAGATAA
TTTGAAGACTTTACATTTTATGTGATTTCAGTAGAATTTATTTAAAAAATGCGTTCCGTT
GTCGAAATTGGGGCAAGTGTCCCTGCGTTTCTTGGGAAACTGTGGAAATTGGTTAATGAT
TCTGAAACAAATCAATTGATATCTTGGAGTCCGGGTGGAAAGACGTTTGTCATAAAAAAT
CAGGCAGATTTTGCTAGAGAACTTTTACCACTGTACTACAAACACAACAATATGGCAAGT
TTTATAAGACAACTTAACATGTATGGATTTCATAAAATAACATCTGTTGAAAATGGCGGC
TTGAGATATGAAAAAGACGAAATAGAGTTTTCGCATCCCTGTTTTATGAAAGGACATGCA
TATTTGTTGGAACATATTAAAAGAAAAATTGCAATTCCAAAATCTGTTGTAACAAGCAAT
GAAAGTGGTGAAAAAATTTTGTTAAAGCCTGAGCTTATGAATAAAGTTTTAGCTGATGTG
AAACAAATGAAAGGAAAACAAGAAAGCCTCGATGCCAAATTTAGTGCAATGAAACAAGAG
AATGAAGCACTATGGAGAGAAGTCGCTATTTTGCGGCAGAAGCATATCAAACAACAGCAA
ATAGTGAACAATCTCATTCAATTTTTGATGTCATTGGTGCAACCAGCAAGACCCCCTAAT
ACTAACGGCAATAATGTTGGAGTCAAGAGACCATATCAGTTGATGATAAATAATGCCGCT
CATAATTCTGCCACTGAAAGCTCTTATCCAGGAAGATTAAAAAATATTAAGCTAGACAAG
GATCCTTTATTGGAGGAGATAAGTGATGAAAATTTGGAGGATGGACCTACAATACATGAA
TTGGCACATGATGACATACTGCAAAATGAATCCTCCCAAGATGCCATTGACCCTACATTC
TTTGTAGCTACAGATTTGAATAATATCACTGATAATCAAAATGTAGCAAACCCATTATCC
AATATTCAATACCATGTCACCATGGAAGACGGTGATGATATTGAATCAGGAGGCAATAAA
ATCGCATATCCTGTCAAGAGTAATAGACTACGATTCAATGAGGATTTGCCAGTAATTACT
TCCCCATCTCCAACTCAGGGTAAACCTTCATCACCTTTAAACCAGAGTCCAGCGATTAAT
AATGTATTTACGATTACACCAAGCACTTCAAAGACCAAACCTCGTATCAAGACTACTAGT
TCCAATACTAGAAGCTTAATATCTCCCAGCAGTTTCAACCCGTCTGCTGATTTTAAGCTT
CCAGCTGAAATATTTGCAAGTGATGATTCTGTAAGTGATGTGGGGATACTGACTGCTGAG
GAAACAGGAATAGAAAATATACTTCAGGATGTTGATGAGGACCCAATGGTATCTTCAACT
AAAGACAAAATGTTGGGTGGTATTAACATAAAAGTAGAAAAAGTAAATGAAGGACTTAAA
CCTTCCAAAAAGTCTAAGAAGTCCAATAAAGACGACACACAGAACATTAACTTAGCGGCA
ATCAAGACTGAGCTTCAAGATGATTTTGATTGGAACAATATGACTCTTGCAACAGTGAAC
AATAATACGAACAACAAAATAAACAGATTCCAAACAAGGAATAGGAGAGATAACATCAGC
AAAAATTGGGAAGAATACTCTTCTCATTTTGGAACAAATTCTAACAAGAATGACCTTGAC
GATCATTTAGACGCAATGCAATCGGACCTTGAATCGTTAAGAGAACTACTGCGAAGCGAC
AGTTATGCTTTGGATACTAATACTTTAATGGGGACGGCCGAACAAAATGATGTACGAGAT
GAAATCAATAGGTTCCGTTTTCACCCTTTCGAGGTAAGATACCTAAAAAACAGGACACTA
TAGGCATAGACGTAATCCCCATTTTCAGTTAGAAAGTGCACTTTACTGATATTATTGAAT
TGCGTAATGTCCAGTCAAAAGGCACACCGCTTTGGTAAGATTTAATATATCTCTTTGTTA
GGGAAAACTTTGGGAATGAATTTGGTCAACTCATGATTCTTTAAACGATAATTATACATC
TTATGCGATTTCAGTTATTCGGATCGGACGATCCATTTTACGGCTTATCGTACAACCCCG
CCGACGAAAGGGCGAAAACATCTAACAATGTTGGTAAGTAAACACAAAAATTTTCTAATC
ACAACTATGATTTTATTTGGCAATTTGAAATTTCACTAAAAATCCTGTCAACACACACAA
CACGCAGCTAGCTTTCCCAATTGTGACTCAGCTGTCTAGGTTTCACACAACTCGACATAT
CTGAAGAATGTCGAGTTCCAGTTGCGTGACTTCGCTGTGGACCTTACGAGGAAACCGACA
GACGACCGATAAACGTGTCCATGATTAAACATTATTTGACTCTGACAGTGAGTTGCTTCA
TTCATTGAACATAAGTAATTGTTTCCAATCAATAAATAGCTCATCCAGTTGATTAAACCT
CAGGTTTCATTACAACATAATATGGTTTTAGTTATTACAAGTTTATGTTAATTGTAGATA
CAACCAAACAGTATCCGATGATTGATTTTGATTGGCTGATTGGTAACAGCGAAGCCTCAC
CAGCAAAATAGAAAGCTGGCTTTCTTCATTGTCAAGATGTTTGCACTGGTGTGCACGTCC
AGTACTCGTTCTCGTCATGTGTTGGATGTACTCGGTAAAGGGTTAAGGATAGTCATGCGA
AGAGGTTACCTAATGGTGTTGCAGCAAAAGTGACATTGTAAATCTATGTTCGGTAATTGT
TGGCGAATAACAACGGATGGGGTAGTCGACTAGCGGCGTGTTTATTATTAAAGTATCATA
GACTTAGTGATGATAAAAATAGAATGAACTTAGAAAATAAATTTGTGGTACAAGTTATTC
AATTTTACCGTAAGGATTAAATGGATACTAAAATTGTTATTAAAATGAAACAAAAACACA
ATACGAAGCAACTACACGGTGATCACGTTTGTTGCGACATTTTATCTGATTACTTTACCT
AATCTGACAACAATAATAGTATACTTTACCATAATATGTCGTGTATAAATTTGTAATATT
CTGTTATTAATTAAAGCAAAGAAGCAGAAAGGTGATATATCGAATCTGTGCAGTGACGAG
AACCGTGCCGAGCAGTTTATAGAAGACGATGGTAGTAACCATATCTTTTATATAACGCTG
ATGTAGTATTTTGAATAAATTATTGCAATTTTGCACAGTTTACAAGTAGAAAATGAATGC
CCAGTTTGTACAGCTACAAAAAATATCGGCTGCTTTCCTAACCTCTGCTCGTCACTCGCC
AATTGATAAAGAGAACAAGCACAACTGGCAGTATTTGTTTATTTTCAAACTGTTACAAAC
TAGTATATTTACTATATACATTCTATATTTTTGGTAATTTTTTTCACTTTCAACAATTTT
TTTAGATAATACTAGCAGTTGTGTAATTATTCTGGGTATTAAGTAGTTTGGAAGTATATA
TTGTACGTAGTATATCGATATCACTGAAGTAGCTGATTATAAATTTATTTAATTGTAGAT
TTCTTGTAATGATTGAAAAAAATACAAAAATATATATATAAAGGAGCATTCTGATTACCA
TTGCTTAGCTAGGCTCCTACTTTAATGTAGTCTATTTAATATTAAAATTTAAGTTGATAT
TTAGGTATATATTATAACATAGAGTAAAAGTAAATTGTTACAAAGTGGATTTAGAACTCC
TATTAGTAATAAGATTATATTTTGCTCTCATATATTATTGTGTTGTGGTATAAAATCCTT
TTACAATTTTATC
(3853 bp)

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