SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40726_c0_seq12
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_heat_shock_factor-d_isoform_X4_[Bombyx_mori]
Ontology
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:0.62 TPM:0.49
ORF EntryO_BomoMG20661_complete:A_BomoMG_comp40726_c0_seq12
Sequence
(Nucleotide)
GGCGATCTGAGCAGTGTATTGCCGAACTTGATAATTTTCTTAAAAAATACCGTGAGATAA
TTTGAAGACTTTACATTTTATGTGATTTCAGTAGAATTTATTTAAAAAATGCGTTCCGTT
GTCGAAATTGGGGCAAGTGTCCCTGCGTTTCTTGGGAAACTGTGGAAATTGGTTAATGAT
TCTGAAACAAATCAATTGATATCTTGGAGTCCGGGTGGAAAGACGTTTGTCATAAAAAAT
CAGGCAGATTTTGCTAGAGAACTTTTACCACTGTACTACAAACACAACAATATGGCAAGT
TTTATAAGACAACTTAACATGTATGGATTTCATAAAATAACATCTGTTGAAAATGGCGGC
TTGAGATATGAAAAAGACGAAATAGAGTTTTCGCATCCCTGTTTTATGAAAGGACATGCA
TATTTGTTGGAACATATTAAAAGAAAAATTGCAATTCCAAAATCTGTTGTAACAAGCAAT
GAAAGTGGTGAAAAAATTTTGTTAAAGCCTGAGCTTATGAATAAAGTTTTAGCTGATGTG
AAACAAATGAAAGGAAAACAAGAAAGCCTCGATGCCAAATTTAGTGCAATGAAACAAGAG
AATGAAGCACTATGGAGAGAAGTCGCTATTTTGCGGCAGAAGCATATCAAACAACAGCAA
ATAGTGAACAATCTCATTCAATTTTTGATGTCATTGGTGCAACCAGCAAGACCCCCTAAT
ACTAACGGCAATAATGTTGGAGTCAAGAGACCATATCAGTTGATGATAAATAATGCCGCT
CATAATTCTGCCACTGAAAGCTCTTATCCAGGAAGATTAAAAAATATTAAGCTAGACAAG
GATCCTTTATTGGAGGAGATAAGTGATGAAAATTTGGAGGATGGACCTACAATACATGAA
TTGGCACATGATGACATACTGCAAAATGAATCCTCCCAAGATGCCATTGACCCTACATTC
TTTGTAGCTACAGATTTGAATAATATCACTGATAATCAAAATGTAGCAAACCCATTATCC
AATATTCAATACCATGTCACCATGGAAGACGGTGATGATATTGAATCAGGAGGCAATAAA
ATCGCATATCCTGTCAAGAGTAATAGACTACGATTCAATGAGGATTTGCCAGTAATTACT
TCCCCATCTCCAACTCAGGGTAAACCTTCATCACCTTTAAACCAGAGTCCAGCGATTAAT
AATGTATTTACGATTACACCAAGCACTTCAAAGACCAAACCTCGTATCAAGACTACTAGT
TCCAATACTAGAAGCTTAATATCTCCCAGCAGTTTCAACCCGTCTGCTGATTTTAAGCTT
CCAGCTGAAATATTTGCAAGTGATGATTCTGTAAGTGATGTGGGGATACTGACTGCTGAG
GAAACAGGAATAGAAAATATACTTCAGGATGTTGATGAGGACCCAATGGTATCTTCAACT
AAAGACAAAATGTTGGGTGGTATTAACATAAAAGTAGAAAAAGTAAATGAAGGACTTAAA
CCTTCCAAAAAGTCTAAGAAGTCCAATAAAGACGACACACAGAACATTAACTTAGCGGCA
ATCAAGACTGAGCTTCAAGATGATTTTGATTGGAACAATATGACTCTTGCAACAGTGAAC
AATAATACGAACAACAAAATAAACAGATTCCAAACAAGGAATAGGAGAGATAACATCAGC
AAAAATTGGGAAGAATACTCTTCTCATTTTGGAACAAATTCTAACAAGAATGACCTTGAC
GATCATTTAGACGCAATGCAATCGGACCTTGAATCGTTAAGAGAACTACTGCGAAGCGAC
AGTTATGCTTTGGATACTAATACTTTAATGGGGTTATTCGGATCGGACGATCCATTTTAC
GGCTTATCGTACAACCCCGCCGACGAAAGGGCGAAAACATCTAACAATGTTGATACAACC
AAACAGTATCCGATGATTGATTTTGATTGGCTGATTGGTAACAGCGAAGCCTCACCAGCA
AAATAGAAAGCTGGCTTTCTTCATTGTCAAGATGTTTGCACTGGTGTGCACGTCCAGTAC
TCGTTCTCGTCATGTGTTGGATGTACTCGGTAAAGGGTTAAGGATAGTCATGCGAAGAGG
TTACCTAATGGTGTTGCAGCAAAAGTGACATTGTAAATCTATGTTCGGTAATTGTTGGCG
AATAACAACGGATGGGGTAGTCGACTAGCGGCGTGTTTATTATTAAAGTATCATAGACTT
AGTGATGATAAAAATAGAATGAACTTAGAAAATAAATTTGTGGTACAAGTTATTCAATTT
TACCGTAAGGATTAAATGGATACTAAAATTGTTATTAAAATGAAACAAAAACACAATACG
AAGCAACTACACGGTGATCACGTTTGTTGCGACATTTTATCTGATTACTTTACCTAATCT
GACAACAATAATAGTATACTTTACCATAATATGTCGTGTATAAATTTGTAATATTCTGTT
ATTAATTAAAGCAAAGAAGCAGAAAGGTGATATATCGAATCTGTGCAGTGACGAGAACCG
TGCCGAGCAGTTTATAGAAGACGATGGTAGTAACCATATCTTTTATATAACGCTGATGTA
GTATTTTGAATAAATTATTGCAATTTTGCACAGTTTACAAGTAGAAAATGAATGCCCAGT
TTGTACAGCTACAAAAAATATCGGCTGCTTTCCTAACCTCTGCTCGTCACTCGCCAATTG
ATAAAGAGAACAAGCACAACTGGCAGTATTTGTTTATTTTCAAACTGTTACAAACTAGTA
TATTTACTATATACATTCTATATTTTTGGTAATTTTTTTCACTTTCAACAATTTTTTTAG
ATAATACTAGCAGTTGTGTAATTATTCTGGGTATTAAGTAGTTTGGAAGTATATATTGTA
CGTAGTATATCGATATCACTGAAGTAGCTGATTATAAATTTATTTAATTGTAGATTTCTT
GTAATGATTGAAAAAAATACAAAAATATATATATAAAGGAGCATTCTGATTACCATTGCT
TAGCTAGGCTCCTACTTTAATGTAGTCTATTTAATATTAAAATTTAAGTTGATATTTAGG
TATATATTATAACATAGAGTAAAAGTAAATTGTTACAAAGTGGATTTAGAACTCCTATTA
GTAATAAGATTATATTTTGCTCTCATATATTATTGTGTTGTGGTATAAAATCCTTTTACA
ATTTTATC
(3188 bp)

- SilkBase 1999-2023 -