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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40721_c0_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:6.43 TPM:5.08
ORF EntryO_BomoMG20607_5prime_partial:A_BomoMG_comp40721_c0_seq1
Sequence
(Nucleotide)
GGTGAAACACAGATAACCACGATTGTAAATGGTTCTCAGTATGATGTCATTGTAAAGAAT
GTTTTATACATACCGAAGCTCACGACAAACTTATTATCGGTAAGTCAACTGATAGCAAAT
GGCAACAAAGTGTCATTTAAGAAGGATGTTTGTTTAATATATAATCCAGTAAATGAGCTT
ATAGGAATTGCAAACTTAACTAATGGTGTGTACAAACTACAAATACAAAGACCAGAGAGT
GCATTATTGGCCATGACAATGTGGCATAGAAGACTAGGACATGTAAACAGTAAATCTTTA
GAAATGATGAAAGAAGGTGCTGTGAAAGGGGTTACTTTTGATAAGAAAGCTGATATTCAG
ATCAAGAACTGTGAAGTGTGCTGTGAGGGCAAACAGGCTCGTTTCCCTTTCCCATCTGCT
AATCATAGAAGTGATATACTACTAGAAGTAATACACTCAGATTTATGTGGGCCGATGGAG
ACCAAATCAATTGGTCAAGCAAAGTACTTTCTTCTGTTCATAGATGATGCCAGCAGAATG
ACTTATGTCTATTTCTTGAAGGAAAAGAACCAAGTATTCCAGCATTTCAAAGAATTTCGT
GTTTTGGTGGAGAATCAAACAGGAAACAAGATCAAAATATTGAGAACAGATAACGGAGGT
GAGTTTTGTTCACAAGAGATGGAAGAGTTCTTAAAACAAACTGGAATCATCCATCAGAAG
ACTAATCCTCACACTCCACAACAGAATGGACTCTCAGAAAGGTTCAACAGAACTGTAGTT
GAACGGGCTAGATGTTTACTGTTTGAATCAGATCTCGACAAAAGTTTTTGGGGTGAAGCA
GTGAATACTGCAGTATACCTAATGAATAGAATACCAGCTGTCAGTCTAGGCATGATGACA
CCATATGAGAAGTGGACAGGCAAGAAGCCAGATTTGAGCTATGTCAGGATTTTTGGAAGT
AAAGTAATGGTGCATGTTCCCAAAGTGCAAAGACAAAAATGGGATAAGAAGGCTGACAAA
TTAATTCTAGTTGGTTATCCGGATAACGTGAAAGGTTACAGATTATATAACCCCAAAACC
AAGAAGATTACTACGAGCAGGGACGTCATTATAATAGAGAAAGAACACTCGGACACAGCT
CAGGTAGTAGTAAATAATGAAAAAGTGTTGGAGAAAGTTGAAAATTCAGAGAAAGAGAGA
AGCATATCAGAAAATTCAACTATAGACGCTAACGATCCTACATATATTTATGACTCATCG
AGCTCCCACGAAGATTCATATCAATCGGTGTATGAAAGTGAAAATGAGTCAACCTTAGAA
TCCATTTTAGAAGAAAATATTCAAAACTTACAGGAGCTTGGTAAGCGCAAGAGAAAGCCA
GTAGAAAGATATGGCTATTCCAATCTCTGCATTGTAGATGAGCTGGAATCCTGTGGTGAA
GAACTGAGTTATGAAACAGCAATAAATGGACCAGAGAAGGAACTGTGGGAACAGGCGATG
GCAGAAGAACTGAAGGCATTTGAAGAAAACCAAGCATGGGAATTTGTTGACAGAAAAGAA
GCTGATAGGATAGTGCAATGTAAATGGGTTTTTAAGAAAAAGTTTGAATGTGATGGTAAA
GTGCGTTATAGGGCTAGACTGGTAGCAAAAGGTTTTACTCAAAAAGAAGGTTTGGACTAT
ACCGAGACATACTCACCAGTGCTTCGTTACTCTACTTTGAGACTTTTATTCGCATTAAGT
GTGAAACTTAACTTAAAAATTACTCATTTGGATGTCACTACAGCATTCCTAAATGGTTAT
CTAAATGAAAATGTATACATGCATGTTCCTCCTAATTTAGATTGTAAAGAAAATTGTATA
CTTAAATTAAAACGTGCAATTTATGGTTTGAAACAATCGGCCAGAGCTTGAAATGAAAGA
ATAAATGATTGTTTATTAAACTCCAACTTTGTTAGGTTAAAATTAGAACCATGTTTATAT
ATTAAAAGGAGTGAAAAAGAACTGATCATAATAGCAGTTTTTGTAGATGATTTTTTTATA
TTTTCTAATTGTCAAGATATGGTAAATGAGATTAAGAGTGTACTAATAAAAAAATTTAAG
ATTAAAGACTTAGGACAGTTAAAACAATGCTTAGGCATTAGAATTCAAATGTATAAAAAT
GGTTCCATTTCACTAGATCAAAAACATTTTGTGGATTACATATTAAATAAATTTAATATG
ACAAATTGTAATGGTGTTGATACACCAATTGAGAATAATTTAAAGCTAGAGAAAAGTGTT
GATGTTTGTAAACAATACCCATTTCAACAATTAATAGGAAGCTTAATGTATTTAAGTGTC
TTAACTCGCCCAGATATATCTTATAGTGTAAGTTTTTTGAGCCAATTTAATAATAGTTAT
TCACTTATACATTGGAAACATGCAAAACGAATTTTGAGATATTTAAGCAAAACTAAATCT
TATGGGCTTATGTTTACTAAAGATGATTGTAACTTAGAGGGTTTTGTTGATGCAGACTGG
GCCTCAAATACTGTAGATAGAAAATCTTATACAGGTTTTTACTTTAAGTTTTCAGGATCT
GTTATCTCATATGAATGTAAAAAACAGCAGACTACAGCCCTATCTAGTACAGAAGCTGAA
TACATGGCGATAACCGAGGCTTGTAAAGAGGCAATATATTTAAAGAACTTGTTGAATGAG
ATTGTAGATTTTTGTAATTATACAATAACCTTGTACAACGACAATCAAGGGGCTCAGAAG
TTGACAGAGAATCCAATGTTCCATAAAAGAACTAAGCACATTGACGTGCGTCACCATTTT
GTTAGAGAAGCAGTTGCTAACAAACATGTAAAAATAGTTTATCTGCCAACATCTGAAATG
CCTGCAGACCTGTTAACAAAGGGCTTGAGTAGTGTCAAACATAGCTATTTTGTTAAGAAG
CTAGGCATGCATATTATTGTGTGATTTATAAAATTTTAAGTAGCTAAGTATGCATTTACT
GGATTGTTTGTGACAGTATGCTTTTGAATTGTTATTTAAGGTTTAGATTATTTTGATAAG
TTGAGGTGTTAAAGTTAGTATCAAAATAATGTTCTGTGGATGGCGACATCTGTTAGCAAA
TATTTGGCACACCTCATAATTGTCTATTATAAGAATGAAATATAGTTAGTCTGTG
(3175 bp)

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