SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40714_c0_seq5
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_guanine_nucleotide_exchange_factor_DBS_isoform_X4_[Bombyx_mori]
Ontology
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007266 P Rho protein signal transduction
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030027 C lamellipodium
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
Transcript
Level		FPKM:4.80 TPM:3.79
ORF EntryO_BomoMG20557_5prime_partial:A_BomoMG_comp40714_c0_seq5
Sequence
(Nucleotide)
GGCGACGTCATATCTTCCTCTACGAGAAGGCCATGCTGTTCTGCAAGCCCGCCACAAAGA
ACAGCCACAATAAAGCCACTTACCACTTCAAACACGATCTGCTGATGTCACAAATAGGTC
TTACGGAATCCGTTAAGGGCGATCTCCGCAAGTTCGAGGTGTGGCGCCAGGGCAGGTGTG
AGGTGCACACGATCACGGCGCCCACGGTCGAGGTGAAGCGCGCCTGGGTCGAGCGGATCA
AACGGGTGCTGCTCGACCAGCTGAAGGAACTCAAGGGCGAGCGAGTTCGGCAGTACGGAC
TGCAGCATCACAGAACACTAATCCAGACGAGCTCGTGGGAGGTGTCGGGCGCGCAGCCCC
GCCCCCAACCCCCCACCGCGCCCCGCACCGGCTCGTGCGACGCGCACGACGAGCCCTGCT
GGTCCACGGACCCCTCCGACGACGACGACGACGACGTCGAACACGCACCGGCGGTGGGAT
GTGGACTGGTGGCGCTGTCCGACTACACAGCCGTGGGACCGAGCGAAGTGTCGCTGCGAG
AGGGACAACACGCTGAACTACTCAAAGTCGGCTGTGCCGGCTGGTGGTACGTGCGGCTTG
CAGGCGGACAAGGCGAGGGCTGGGCTCCGGCTGCCTACCTCGACCAGCGCAAGACGTCGC
GCTCCTCCAGCAGGTCGCACGACCGCCTTCACGAGCATTGAACCACCACACCTTGCGTTA
CCGACTACACTACCTGTCCTTGTTACTCTATAATAAGTACCAAAAATGTCACTGTCAAAA
AAGACTAACCTAGGTATTTAATTGGTTTATAGCTGCTAACTATATGATATTGGTATTCAT
CTCTGCTTTCAGTATTACTTGAGATCTAAAATGTAATTCACCACCATTTAGTATGAAACT
TATTTAGCAATATCCAATGTCTAGCGTTAATTTTGTAGGACAGTAGACGGTGTTGCCAGG
ATTTTTCGGTGAGATCAAGTTTTGCTCAAGCTTGTTCATCTCGAGCGACTACTTCTCAGT
AGTGGCGGGAGATTAGTTACTCCCTAGAATTTCCTGGTTACGCCCGAATCACAATGAGAC
TTGTTTTCCCGACGTAGTCCCATCCCACTTGTTAATGTTTATCGTCAAGCAATTTGTTAA
TGTGTGTAAATGTTGTTCTAAAAAAGCTTTATTGTAAACTAGTGTTTTAGCCCTTTTAGC
CATAGTCGTTACGATTATCCAAAGTTGTGTTTTAATGGCGTCGCGTAGGACCGTGGGACC
GAATCGGTCTCGTCATTTTTGTATATATCAAATCGACATTAAAATTAATTTTAGTTATTT
ATTTTGATGGCTTTCGGTGTTGTTTCGTGTAACGTCTCGATACTCCATGACAGATTATGT
GAACGAGAATCGATTTCAAACATTTATAATTAATTATTAACGTCCCGTGTGATATTTTCG
TGAGAATATCTATAATGTTATTGAATATAAAACGTTTTCAATACATCAATCCATTTTATA
ATTGTGTTTTTTACGTCCATGAAGTTTTTTTTTTTAATTCATAGTAGTAAGTAGTACGAG
ACATTGAGTTTGTATGGTGCCTCGATAATTGTCTTTTAATATTGTAGCAAAGCCTGTGGT
AGCAAGTAATCATTTAATCATTTCATATCATACGTTTTTGTCAATATTGCTTTATTAATC
GTTAAAATTGTTCGTTTATTGTTTAAAAATTAAAAAGCTATAAGCATGATTTTTACTTTC
GAATAACAATATCTTATCTGTGATGCATTTGTACGTACGATGTCTGATGTAATTGACCTT
GAATTCTCATATCTCATTATTAATTATTATTTAAATCCACGATTGTGCATGACTTTAGCT
ATATCTATGTTCATACACGTAGTGACATGTTTGTTTATCAGAAATTAGTTTTAAAATGTG
TAGATTGAAACAACATAAAATACACAGAATTTGTTCAAAAAAAAAA
(1966 bp)

- SilkBase 1999-2023 -