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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40703_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_spatacsin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.70 TPM:0.55
ORF EntryO_BomoMG20441_5prime_partial:A_BomoMG_comp40703_c0_seq1
Sequence
(Nucleotide)
ACTAAAATTGCAACTGCATTGTTTTTTCAATCATTTGAATTTTCTTTATTGGAATTTTCC
TCGCCTGAAGAAATGTGGAGTTATCTTGTAGAAAAGAATAAAGCAATGATTTTGATCCGT
TGGATAAATGTTCAGCTGTCGGAAGTGGTACGAGACAAGAATGCTCGTTACAATTTTTTC
AACAACGAAAGCTTTGTCCAGAAGCTGCTCAATGTTGACACTACTGGCTTCGACACTAAA
GTCCTAGAAAGTTTGGATGAAATCTTTCGTCATTGGTCGATTACACACGAAATGATAGCC
AGCGTGTCTGTAAGCAAATGTTACGCTTACACTAAAATGTGCATTTATGATACACTTTGT
TCTTATGGTATTGTAAATGATGACGAACGAGATGATTTGTATCAAATCATTTCGAGACTT
GCCCATACTCAGAATTTGAAATTAGTAGATGACATTTTCACGGAATCTTGTTCTACCATA
ACTAAACAACATTTTTATGTACAGTTGGCAAAGTATTGTGTGAAGAATAAACTGTATAAA
GTATTGACTATGTGTGTGGAAGGCCACATTTTAGACACGGACTTGTCCGGTGTGGAGCAG
GAAGCAAAGGATTGTATAGAACTTTGGCTGCTATTTAAAAGCATTGAACAAACTTCCGAT
CGACAAAGTCACGTCCTTCCCGTATACAAGACATGCGAGCAGATAGCCAAAGATAATATT
CATGATTACATTACAGCCAATCCTCACCTAGTCCTAGGAATGATTTTGTTGGAGGATTCT
ACAAAATTGTTTGATATATTTTCCAAAGAGGACTATTTACACTTTACAGATTTTGTTTTG
CCAAATAAAATATATAAAGACAAACTTCCTCATTTGCACAGCGTTTACAAAAAATACTCA
GATTTGAATCAAATGTATGATTCAAAAGATGTGAATGTGTACCAGCTACTGTCCGGATAC
AGAGGATTGGACGTTTCAAAAATATTTGAATTCCAATTGATTAACCAGACCACAAACAAT
CTCTTTGCTGATAAACCTGACAGGCGAAGCCTCGGTAGTCTGCTGTCCAATGATGTAGAC
GTCAAAGCAGCGTGTATAAAAGCCTTATCTCAAAAAGGAACAGAAATGCCAGACTTTGCA
AATGAAAAGCTAATGAAAAGATTTGGCTACGTCGCTAAGTTGAATCACCTGTATTATTTA
AAACAGTATCGGCCTTGTAACGCCAGTCAAGCCTTTGTGGCTCAGCAATACCAGACATAC
AACCGATTGCAAGATAAGAGCATCAAAAGCGCTTGTTGTGAAGCGCACGCTCTGGCTTTA
CAGAATTGGTCCGATCCGGCCCTTACAGCTTGTGCGGTTTCGTTCGTAGCAATGATCGGG
TGTAATCCAACAAGATGCAGGGTCCACGTATCTGCTGCGAATATGATAAAGAATTACTTA
GTAAGAAACGGAGTGTCCGAAGAGAAGGCCAATAAAACGGTCAACGAGTACATGACCAAA
CTCATTCAAAGTAACGACGATGTGGCCAAAGATATTTTGAAGCATTTAGAGGAGATAACA
CTTCACAGTTTGAAAGTGAAGCAGGAAAACGAGGGCAAGTTGGACATGTCGTTCGTGTTA
TACGAATCACAAACAATGGTGAAATTCGCTATGCTCCATAATTTACCACTTCCCGAAATG
CAGCTCAGGGAGTTCATCAAAACAAATTCGTGGTTCAATTTCCTATTGTTCGGAGACGTG
CTCCGATACCCTTTACAGCAGATGCTGCATTTATCACAAGAATTTGAAAAACGTTCGTAT
GCCGAACACTTAAAGCATATTATGCTGCACAAGAATACGGAAACAGATTGTTCCGATAAG
GAATTAAAGTCTCCGACGAATGGTCAGAGGCGGCTATCTAGGTTGAATTCGGTCGAAATT
AATATAAAACCGAGCGGCGGACTGGAAGGAACATTCAATGCGTATTTGGGCCGGGAGCTG
TGGGAGGTGGCGGCCGCGTGCCACGGCCCGGAGGACCCTCCGGCTGCGCTGCTAAGGGCT
GCTGATCTGTGTCGAGAGCCACTCCTCGTACTAATAGCCAGTTGCTACGAACCAAACGCC
GTGGACGTTCTCTGGGCGCAATGGGTATTGTCTTCAATGGGACCCACGAAATGCACATCG
AACGACATGCAACAGATAATTGATCAGCAGTGCTCATCTGCTGAACAATTCCAACGGGTG
GCCGAACTGTGCTTGTACGAAGGATACATTACTACTCTGCACGAATCTATGACCATATTT
ATGCCGGACAGCCCACTTAAACTCCTCACCGGTTTTCTCTATCGCTGCATAAGAAAACAT
CATTTCGATTTGGAGTCTAGTAAGCTTTTAACGAGCTTTATTCTGCATTGTCAACGAAAA
TATAGCGTGGAGTCCAACAGGTTGTCGTGGCAAATGTCAAAAGAATTCCTCCAGCGCGTT
GCGGTCTCCTTAATCAAGATAGCGATCAGCGAAAACTTTGACAGCGCCTACCATCAAAGA
GAGTTCTTGAGATTGTTGGCTAAAGCGGAATTCGGAAAAGACTTTTTAGTGCCGTCGCCG
AATTTCATCACTCTCTTCGAAATCCTTAAGATATCTATGGAGACGTCGTTCGTCATAAAC
ATCTCGAGGATGTTCGAAGACGATTTTAAACAGCATCTTTGTGAGAGCATCGACGTGTAC
ACTTCGAATCGTAATTATGACGTGGCACTTAAAATAGCGAAACTGTCGGACTTATCGATC
AACAAAATATTGATCGCGGAATGGACAGATAAATATGAAGTGTTACTGCAAAAACATGAT
GGTATCGAGGAAAAAGATTTGACACTCTTTATAGCGGAATGCAGTGAAGCGTTTAAAAGG
GCAGGCGTCACTTTCAAAGACGCAGTAGACTTCCTCCTGGACTACTCGGCGAAGATAAAA
GATCCCGTTCAGAAATTTTATTCCCTAAAGATCATCATGAATTGGTTCGAAGAGAATTTA
GAGTACGGTCGTTTGCGCGAAGAAATCGAACATTCAATGTGGAATGCGTACTTTAAAACC
GAACCGAACAGCATATTCTTGAACAATTATGCGAACACGTTACACTTCATAGCGACCGGA
CAGAAAGATAGAAACGTCTCGAACAACGTTGGGAGCTCGAACTCAGAGAGACCCTTCTCG
ATGACGTTGAACGAGATCGAAGTCGAATCGGATGTCGGTAATATCGAGAAAACGGTCCTA
CTCGAGGAGCCCGAAGCGATTGACGGTTGGCGGAAGGTGATCTTCCAGCTTTTGGAGCTC
AGACTCATCGTCGACGCATTCCGTTTGTCTACGCTGTTCAAAACGCAGCCGGAGTTCAGG
TACCGGCCGCCGCCGTGCCCCGTCCAAATCCTGAGATCCAGCCTGAAGCTGGCCGAAGGA
ACGTGCTCGCCTTACGAGCTACCCCAAGAATTGAGATTAGTGATATCGTCTCCGGTTTTG
CAAAACAAACTGTCAATTTCAGGCGTGTCCGACGCGAGTTTTGAAGAGCTGGTAGTCATA
CAAGAGAAACAAATGAATGCTCCAGACAGCTCGCACCTCGCGGCTCGCGAAGAGGCCGAC
CGGCTGTCCGCGTTGGACGCCCTTGCCGTGCGAAGCGGCTTGTCTCTAGCCAAACAGGTG
GCCAGCTACTTCCGGATAGCTTTGCAAATCGGCTGGGACTATTCGTCGGTGTTGAAGTAT
CAGAATCGAGCCCTCGATTTTATAAATTTCGTGAGCGGCCGAGCGCGGCTGTCGTTGGCG
AACCTCGTTTTTAGAACATTCAACATCCCCACTAAACAGGTAGCAGAATACCTTTGCCGG
GAGATGGTAGCAGCGATCATATCGCCGCATCTGGTCAAGACGTCAACCTTCAGACAAAAG
GAGCACTTTCAATACACACTATGGGGCTACGCGATCAACTCCGACATCGAGATGTTCCTA
AACATGAGGCCGGACGCTTGTAGCCAAATAGGCAGGCTGATACTCGATCACCTAATGGCC
TTCCAGAAGATATACAAAGCGACGACCGTATCGAGAGTTCCAGAGAACGCTCTAGACGAT
AGTTGTCTTGACGTCGAGACTTTGATAGATGAAGAATATCAGCACGTTGAGGGAGAGGAA
GCGGGTTCGGTATTAACGGGCGAAGGTACCTTACTGTCTGCGGAAACTGAGTCCGTGTAT
TCCGTGTCGACGGTCTACAGCGCTGGTAACAAGCTGACCCGCGACTCCCGGAGGAATTTA
TTCGATGTTATAACAAGGAATAACGTGCACGTCCGATACGAGGTCAAATCGAACGTTAGG
AAGATAACGAAGGGTGCCAAATTGTCATCGAAACAGGTGAACATAATAGCGATAGAGTTG
CTGGTGATGGCGCACGAGTGCTTCTCTTGCGCGTGCGACACGGAGGGCGTGGCGGTGACG
GTGCGGTCGGCGCAGGCTCTGACGTCACGGCTGCTGGCGGCCCGCTCGTGGCGCCTCATG
GTGCGTCTGCTGACCGGCCTCGCGCGCTACACAGAGTGCGCTTATATATTCCAGGCGCTA
AGAGACAATCACCAATTCGAATATCTTCTCGGTCAATTCGATTATATGTTAGGGCAGCAA
CCCGATAAAATAGCGGAGTTCAAACAAGGCCTGCTCGATTTCCTGAAGAACCATTGTCCG
GGCGATACCGACACGTACATAATGGTCGCCCTACACTTCAACATGTACGCCGAGGCGGCC
GGCGTCAAGAAGAAACAGGCATTGAACTTGATTGAGGATTTAGAAAAAATGGCTTTGGAT
GCCGCCAGGTTGGTATCGAAGAAGCCCTTCCAACCGCCGACCTGGTTGTTGATTCACGAC
AACACCTCGACGAGGCTGCTCCTCGAGACCGCGCTGAACCATTGCACGGACGCGGCGGAG
CTGTACCTCCAGGGCGGATGTACTGGATTCGCTGGCGAAATGGCGGCTCTGGCGCAGCAG
ATCGCCCTACAAATATCCTTACTAAACGCTTCTCCTACACGACTTATATTGAATCGAACT
ACGGAAAAAACGTATAGACTTGTCAGCGAATATCTGAGTTTCATGGAGGGTTTAGTGCTG
CTTTCGGGACGCAGCGGGGAGGCGTGGCGCGAACTCGCCTACAGACGCGCGCTCTGCAAC
GACCAGGCTTACCTCCGGGACATGGTCACCTACAGGCCCGACGTGGCGCACGACATGCTC
AGCAGATATAAAACAGAGAGAAACAAGACTTCCGTATCGCAGGCAGCTATGACTGAACTC
CGTAATCTGTGTAGATGATATAAAATAAATATTTGAGTTACTCACTCACAAAAATACTAT
ATTCAACAAAGTATTGAAAAAAAACATTGCATATTTAATCTTAAGCTATAATATTGCATG
CTTATAATATAATCGAAACATTATTAATCAAATAAGATGGGACTGTTGCAAATGGCGTGG
GACATGACAAGGACAAAGAAGATATTATTATAATCGAAATAATGTAACCATTTATTATTG
TTGATATTATAAAAATAATCGCCTGTGAGATTTATCGAGTGGACTGATTAATTGTATTTT
TTTCTGTATCTAAAATAAGAGATCAATAAACCAAGTAATCGAAAAAAA
(5628 bp)

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