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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40693_c0_seq3
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_PHD_and_RING_finger_domain-containing_protein_1_[Bombyx_mori]
Ontology
GO:0006366 P transcription by RNA polymerase II
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0046872 F metal ion binding
GO:0070063 F RNA polymerase binding
Transcript
Level		FPKM:9.28 TPM:7.33
ORF EntryO_BomoMG20218_5prime_partial:A_BomoMG_comp40693_c0_seq3
Sequence
(Nucleotide)
GGGTGGGGGGGCGGACGGGGGGGGGGCGGGGGCCGCGGGGATGGAGGCCGCCGCCGTGCC
CGCCGCCCTGCTGGACGACGCCGTGCGCCAGGTGCTGGCCGAGCACCGCGGGCTGCTGGC
CGCGCCGCCGCCCCTCAGCGACGAGGAGGACGACGGCGACTGCCCCAACTTCTCAATTTA
CTCGGCCACCAGCGTGCACATCGCCAACGACGCGGCCGCGGGCGTGCTGCCGGCCGAGAA
CCCCGCCCCGCGCCCCTCCGACGACCTGCGTGACCTCGTGCAGGAGGACGACGACCTGTC
GCCGCCGCCCCCCCTCGATGCTGTCCCCAAAAAGAAATCTGATGAAATTTACAACGAAAA
AGTATCGAAAAGGTGTCCCATCACCACCGACACTCGAAGCCCCATAAAAATAAAAATCAA
CGCTCCCTCGTTGATAAAGAAGCGTGTGTCTCTCTACGACGAAGAGGAAGATTCAATGCC
GGCAGAATCGGGAGCTCCTCCAGAAGACGAGAGTTCACCTTCCAAAAGCGTAGAACCTAA
CGTGGAAACGGATAAAAAATCAGTGGAAACTGTAACACAAAAGAATTCTTCGGAAGATAA
TAAAGATAATGCAGTTTCACAGATGGCCTCATCCGACTTGCACAATAGTGACCTAAATTC
GCACGAGCTCGATAGCGCCAAGCAAGTGACGGAAGCAGATGCCTTCCCCGAAGCCTCGTG
CGAGCCTGCAGCCGACGGAGGTGAAAACGTAAAAGATAACCGAACTATACCGAGCAGTGA
TGTGTTGGAGACTGCGCATAAATCTGATCACACGGAGCAGTCCGACTCGGAGACGTCCGA
GCCCGGCGACCGCGAGCGACCCGCCTCTGTGTCTCCGCGGGGAGAGGAGCCGCTGGAGAA
GATGACCGAGTCAATCAGCGAGACGGAGGACGAGCGCAGCTACACGCCCTGTCTCGACGA
AAATAAATCCAAAGATACATCTCTCGAGACAGAAAAAGACAAAGGACTCGAAGGACTCGA
CACAGAAATGATATCAGAAGACGAAGGGAACGAGATGTTCTCGGAGGAGGACAAACCGAA
GTCCGTCGGCGCGCCCTGCCCGTCCCCCGAGCGACCGCCCGAACGGCTGCGGTCGCCGCC
CCTCGACAGCAAGAAGGACGCAAAGGACTCCGAAGGCAAAGGAAGGAAGAAAAAGAAAGA
CACAAAAAAAGATGCAAAAGAACGAGTAAAGACCAAAAAGAAAACTGATGTTGAATTTAA
GAAACTTAGCAAAAACGGTAAGGAACGAAATTATAGGGAAAGAGACAAAAACGGAACGCG
AGACCGTCGCGAGTCCACTGACTCTGCGGAAAGAGAAAAACGTAAGCGAAAAAGGAAAGA
AAAGAGGAAAGATCTCGAGCGATATGACGTCAGAAATATTGTTAGTGAAAAGCGAAAGAA
ACGAAAAGATCAATTTGGGCGTGACGTTTCACCTCGAGTTCGATCACCCTCCCTCTCCCC
TCCGCCTCGGCGCTCCCCCTCTCGCGCTCGCCGCTCGCCGTCCCGTCTCCGCCGCACTCC
CTCACCGGGGCGAGCGTCGCCGCCGCGAAGGCTCACGTCTCTCTCTCCCGTCGGCCGCCG
CAAGAGGTCAAACTCGAGACGGCGTCGATCGCCTACTCCGAGAATTCGACGCTCACCGTC
TCCGGTTCGTCCTAGCCTTTCACCGGTCCGCATCCGCCGGTCCCTTTCCCCACACCGCCC
CGCCACCCCTCGCGCACTTTCTCCGAGCCCCCGACGGCGGCGGCGAACGTCCACATCTCG
CGGCAAACGAAATGAGCCGCGTCGACGTCGTTCAACCGAACGTGCCCGGAAACGGCGACG
ATCAGTATCCGGTTCGAGAAGTCCACGCCCCAAATCCACCAAGAGAAAAAAACGCGCAAG
ATCTGAAAGGCCAGCTTCGAAACGACGATCGCCTCGAAAGAAATCGCCTAAGCGACGCAG
AATTCGAAATCGAAGCGCGAGCAGGGTTCCGGCGCCGTCTCCGACACGCGGCTCGCCCTC
CCCCGCGCCCCCGGCCGTCTCCGGTGCCCCTGTCGCTCCTGCGCAATGGACTTCTCCCTC
CCGCCTCGCGTCTCCACGCACACCCCCCGCCGCGCCCCGCCGGCGCCGCGACCCCGCTCG
CCACCGTCGCCACGCGCGCGATCCCGGCGGAGCGTCCAAGGAGGTGTTCACGTCCGGCGA
CAACATCCTGGTCAGCGTTAGCTTTAAAGATCAAGACAGAGTCGTCGATGACGACAAACG
GGAGAGACGTCGGGAGCGACGACGTCGCAAACGAAAGACCGCAGCACCTGAGCCCGAAGT
CGGTGTGCGACCCGTCGCCATCATTGATTTGGAGCGGTCTCCATTCCGCGAACTGACGCC
GTCCCCGCGCGACGTCATCGTGCTCAGCGACAGCGACCCCGGGGAGAGGGAACCCGCGCC
GGCCCCCGAGGTTGCCGCGCCTGAACCGGTCGGACCGAAGACTCCGCCCGAGCCGACGAC
CGCCGAGCCAGCGCCAGCCGCAGACCCGGAAGACGGCCGCGGCCCTAACACGCCGCCCGA
GCCCCCGGACTCGCCGGACGCGTACGACCCGTACGAGCCCACGAGGTCCGCCTCCGCCTC
TCCCTCCCCCGCACCTTCCCCCGCGCCCGCCCTCAGTCCGCCGCGCCCCACCATCACGCT
CGAGGCCGCGCAAAAAACAAACATGTCCGCCGACGAAGTACTCGACAGAAGACCGCTGTC
ACCCATGGAAAAGGTGATGGCGTTGCTGCAGTCTACTCGAGACGTGTCTCCGGAGCCGCC
GCCGTGCGACCCCCTTCCGACCGCCGAAGTGACCCCCGGGCCCCCGCCGGCCGCCGCCCC
GCAAGTCCCGGCCGCCGCCCCACCCCGCATCGTGTTGCCGGAGGCGACGCGGACACAGCC
GCCGAAGCTGTTCCTGGCGAAGCCTTCTCCGATCAAGTCGGATCCTATAAAGCCGATGCC
GGCGGCGAAGATAGCACGCGTCCCCCTGGGCAGCGGTGGGGGGGGTGCGCCGGCGGTGTC
CCTGCCGGGGGAGGACTCCCCGTACTCCCCGGGCTCCAGCGACTTCGGGGAGTTGTTCGA
GCCGCCCCGCCGCGACATGTTTGAGGCGCTGCTGGACCGGCCCCGACACAAGTCCCGCTC
CAACGCAGCTAAAGTGCCCGTCAAACTCGACCGTCACAAAGGGAAGACTCAAGTAGGTGT
GAAAATAGATGAAGATAGTTTGAAGATACTGGACGAACTCCCCAGCTCTGCGGTCGAGAT
GCAGGTCAAGAGTAAATTCTTGAAGAAGCTCAACAGACAGGAGCGAGTGGTTGAAGAAGT
GAAGTTGGTCTTGAAGCCGCACTACAACAGAAAGCGCATCACTAAAGAAGAGTACAAGGA
TGTGCTCCGACGAGCTGTCCCCAAGATCTGCCACAACAGAACAGGAGAGATCAACCCCAC
GAAGATCCAGGCTCTGATCGAGGCTTACGTGAGGAAGATCCGGAAGAAACACAAGCTCGG
CCTCGCGTAGCACCCGCGCGTCCGTCTGCCCACGTGTGACGTCACCGTGTCAATGCTGCT
TATATCTACGGACTACGGACAATGTATTTTACTTAAAAGAATTTTATTTAAATAAAATTA
GATTTTAA
(3668 bp)

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