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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40679_c2_seq19
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_leupaxin_isoform_X3_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.69 TPM:2.92
ORF EntryO_BomoMG20132_5prime_partial:A_BomoMG_comp40679_c2_seq19
Sequence
(Nucleotide)
CGGCATTCGTCTCGATCAAAAGCACCCGTCCGACTTTATACGCGCTGTTAGCGGCACAGG
GGGAGATAGCGGGACTCACGTGTACAGAGAGAAACGCGCGTGGCAGGAACAGTACCGCAC
CAACCCGCGTCAACCCGAGTCCGCATCTCTCGAGCATATGCTCGGATCTCTTCGGGCAGA
CATGAGCCGCCAAGGAGTACAAACCCCCCAGAAGGGATGCTGTAACGCCTGCGAGAAACC
AATCGTTGGACAGGTGATCACGGCGCTGGGTCGCACCTGGCACCCTGAGCACTTCACCTG
CGCTCACTGCAACCAGGAACTGGGCACGAGGAACTTCTTCGAGCGCGACGGCAGGCCCTA
CTGCGAACCCGACTACCACAATCTGTTCTCACCGAGATGCGCTTACTGCAACGGACCAAT
CTTGGATAAATGCGTCACAGCTCTAGAGAAAACGTGGCACACGGAGCACTTCTTTTGCGC
TCAATGCGGTCAGCAATTTGGGGAAGAGGGTTTCCATGAAAGGGACGGGAAGCCCTACTG
CAGGGCTGATTACTTTGACATGTTCGCCCCCAAATGCGGTGGTTGCAATAAGCCCATAAT
GGAAAACTATATCTCAGCGCTCAACACCCAGTGGCATCCAGACTGTTTCGTTTGCAAGGA
ATGCCGTGAGCCTTTCCACGGAGGTTCGTTCTTCGAGCACGAGGGCCAACCGTACTGCGA
GACGCATTACCACGGAAAGCGAGGGTCATTATGCGCGGGCTGCCACAAACCGATCGCGGG
CCGATGCATCACGGCGATGTTCAGGAAATTCCACCCGGAGCACTTCGTCTGCGCGTTTTG
CCTTCGACAACTCAACAAAGGCACTTTCAAAGAACAAAACGACAAGCCGTACTGCCACGC
GTGCTTTGACAAGCTGTTCGGGTAAAATGGCGGCGAGCGAACGCAAAATGGCGCCTGTTG
TTGTCACATCAAAATGTCGGATATCGACAAATAAATTTTATGTAATACGACTTTTATTAA
TTATTGATCGGATACAATATATTCGTATTGTTATAAAAATCGATTTATTATATTATTAAA
CTAAATGGAATAACATTAGATTTTATGTGAGAACATTGTTTGTTTTTTGTGAGATTTAAA
GTCTCGAACAATGAAGTCTAAATATAAACTCATCTGCTCACGATCTTAATAGCTCATTGA
AAAAGATAATCGATAATCGAAAATTCGAAAAAAAAAAAAACATTTTTTATTGGTCTAAGT
TGTAAAGTTATCAATAAAAGTAAGGAATAATACGCAGTAGTAATTTACTACCATTAATTC
CTTAAAATCTCTATAAAATTCACTACAGTTATGTTTAAGGTAAAGAAAACAATGAAAAAA
ATATTCATTTTCTTACTAAAATGTTAAATTTCTTAAAATATAACGGATATTCTTTGAAAT
AGTAGTAGCTAGATAAGTGCATGTGATGACTAATTATAAAATATTTATATAAACCCTTAT
ACAGTTTAGATAGGTTTAAATGTTTTTGTCGTCGGTCTAAAATGTCACAGACATTAATTG
AATAAGGTTATAAATAAATATACGCGGTTAGGTCATAAACAATATTTTTTTAAATAGTGT
AGACCAGGAGCCTCCTATGTTATTTGTTTTAGATTTTGGTACGCTGATAAATTAGGAAAC
GGTCAGCACACCCTTGTAAGTAACAATCGCTGAATTTTTACTAAATCTCCCATTCTACTT
AGGGAGAGAGAACTCAAATAGGGAATATTTGAAGAGTTGAATATGGAGTTCATGTGTCAA
AGCATTTCTTGCCTAAATATCGCTAAGTAATACCACTTATACAACAGGTAAACATACTGT
AGCTTGTTCGGAGATTTTAACGACCGGCTGTCTAAAATCAGTCATTCGCGGAAATTTCAT
TTCCATGTGGTTATCGATTTTTGTTTATAAATGTCTCATAAAATTCAAACGATAAATAAA
ATAAATAAATGGACATCATAAATAAATAAACCAATATGTATTAAAAACAATTTAGAAAAG
GACCGTTTCAACAATCAAGATAGAACCCACATATTTCCATTATGACGTCATTGCTTCAGT
TATAGAAATTTAATACCAAGTATAATATACCTGTGAAGTGACAGAGCATCATTAGCCTCT
TTAAATTATTTCTTCAACACGGTACATATTGTATTGAATTATATTCTTTACTCAGTATTT
GTTTTTAATAAACACGACATCAGTCAATTATATTATTAACCCTGGTAACGTGTTATGTTA
GAAAACAAATAGTGGGTACTACAGTCGTAATACCCACATTTTATTTTGTTCAGTGAAACG
GATTATATGAGGTATCATCATCATCAGCCTTTATCTGCCCACTGCTGGACATAGGCCTTC
CCCAATGCCTTCCACATAATGCGGTCCTCCGCCTTCCGCATCCAACGACTTCCCGCCGTG
CGCACTAAGTCGTCAGTCCACCTGGTTGGAGGACGCCCCACGCTCCTGGTACCCATCCGT
GGCCTCCATTCGAGGACTTTCCCCCCCACCTGGCGTCGCTGGCTCGACAGATGTATATTG
TCCTTACATACTTGTATTGTGTTTACAGATTGAGGACTATAATCACCAATCAATCATCAA
GAAATCGATCAATGAAACTTAATAATTCAGAGACCGTCTCACGGAAATTTTGAGATATTT
TCTAAGAATATAATGTTGAACGTTTATTAATAATATTACCCTACCCTCCTTAATATTTTG
CGTCACAATAAATTATGTTCAATTTCGATTACATTTTTAATTTATTTCCATTGTTCGGAA
CATGATAATAATAGCACTTTGTATAACAGTATCTAAAGTACAATGTTTTTTTTAACTACC
TTTGTAGACAGACGGGAATACGGCCTACCTGATGGTAAGTGGTTACCGTAAAAAGTTGGT
GGTTTGTTATTGTTACCATTCATATTGTTGCACAGTACTAAAAAATGCTGCATGTGTTGT
ACTTTTTTTGTTATTTGCCGAGTTATGGCCAGC
(3033 bp)

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